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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6PWF | 20507 | 2023-11-16 | 2019-07-22 | 4.07 | 4.13 | — | 4.1 | 0.009 | 1.01 | 0.0 | 0.06 | 26.91 | 0.01 | 2.066 | 6.15 | 0.11 | 9.8 | 90.2 | 0.0 | -6.10 | 0.64 | 0.76 | — | 4.1 | 0.003 | 0.66 | 0.0 | 0.04 | 27.01 | 0.00 | 2.070 | 11.68 | 0.00 | 5.7 | 94.3 | 0.0 | -2.28 | 1.15 | 0.64 | 0.75 | — | 15197 | 1208 | 11 | 292 | 0 | 0 | 0 | logfile |
✔ | 6PWF | 20507 | 2023-12-10 | 2019-07-22 | 4.07 | 4.13 | — | 4.1 | 0.009 | 1.01 | 0.0 | 0.06 | 26.98 | 0.01 | 2.066 | 6.15 | 0.11 | 9.8 | 90.2 | 0.0 | -6.10 | 0.64 | 0.76 | — | 4.1 | 0.003 | 0.66 | 0.0 | 0.04 | 26.96 | 0.00 | 2.048 | 10.78 | 0.11 | 5.2 | 94.8 | 0.0 | -2.58 | 1.15 | 0.64 | 0.76 | — | 15197 | 1208 | 11 | 292 | 0 | 0 | 0 | logfile |
✔ | 7V2o | 31658 | 2024-01-17 | 2021-08-09 | 3.5 | 3.22 | 3.31 | 3.0 | 0.008 | 1.12 | 2.0 | 0.10 | 23.45 | 0.00 | 2.203 | 6.79 | 0.18 | 5.3 | 94.5 | 0.2 | -0.53 | 0.81 | 0.84 | 2.00 | 3.0 | 0.006 | 0.67 | 0.0 | 0.04 | 23.41 | 0.00 | 1.939 | 11.18 | 3.00 | 6.8 | 93.1 | 0.1 | -0.41 | 0.36 | 0.80 | 0.83 | 1.97 | 53005 | 2624 | 24 | 1487 | 2 | 0 | 0 | logfile |
✔ | 7V2o | 31658 | 2024-02-13 | 2021-08-09 | 3.5 | 3.22 | 3.31 | 3.0 | 0.008 | 1.12 | 2.0 | 0.10 | 23.97 | 0.00 | 2.203 | 6.79 | 0.18 | 5.3 | 94.5 | 0.2 | -0.53 | 0.81 | 0.84 | 2.00 | 3.0 | 0.007 | 0.71 | 0.0 | 0.04 | 23.82 | 0.01 | 2.071 | 11.25 | 2.41 | 6.9 | 93.1 | 0.1 | -0.28 | 0.36 | 0.80 | 0.83 | 1.94 | 53005 | 2624 | 24 | 1487 | 2 | 0 | 0 | logfile |
✔ | 7V2o | 31658 | 2023-06-14 | 2021-08-09 | 3.5 | 3.22 | 3.31 | 3.0 | 0.008 | 1.12 | 2.0 | 0.10 | 16.74 | 0.00 | 2.203 | 6.79 | 0.18 | 5.3 | 94.5 | 0.2 | -0.53 | 0.81 | 0.84 | 2.00 | 3.0 | 0.006 | 0.68 | 0.0 | 0.04 | 17.20 | 0.01 | 2.071 | 11.50 | 0.41 | 6.4 | 93.5 | 0.1 | -0.38 | 0.37 | 0.80 | 0.83 | 1.99 | 53005 | 2624 | 24 | 1487 | 2 | 0 | 0 | logfile |
✔ | 7V2o | 31658 | 2023-07-03 | 2021-08-09 | 3.5 | 3.22 | 3.31 | 3.0 | 0.008 | 1.12 | 2.0 | 0.10 | 16.74 | 0.00 | 2.203 | 6.79 | 0.18 | 5.3 | 94.5 | 0.2 | -0.53 | 0.81 | 0.84 | 2.00 | 3.0 | 0.006 | 0.68 | 0.0 | 0.04 | 17.20 | 0.01 | 2.071 | 11.50 | 0.41 | 6.4 | 93.5 | 0.1 | -0.38 | 0.37 | 0.80 | 0.83 | 1.99 | 53005 | 2624 | 24 | 1487 | 2 | 0 | 0 | logfile |
✔ | 7V2o | 31658 | 2023-08-09 | 2021-08-09 | 3.5 | 3.22 | 3.31 | 3.0 | 0.008 | 1.12 | 2.0 | 0.10 | 16.74 | 0.00 | 2.203 | 6.79 | 0.18 | 5.3 | 94.5 | 0.2 | -0.53 | 0.81 | 0.84 | 2.00 | 3.0 | 0.006 | 0.68 | 0.0 | 0.04 | 17.20 | 0.01 | 2.071 | 11.50 | 0.41 | 6.4 | 93.5 | 0.1 | -0.38 | 0.37 | 0.80 | 0.83 | 1.99 | 53005 | 2624 | 24 | 1487 | 2 | 0 | 0 | logfile |
✔ | 7V2o | 31658 | 2023-09-27 | 2021-08-09 | 3.5 | 3.22 | 3.31 | 3.0 | 0.008 | 1.12 | 2.0 | 0.10 | 16.74 | 0.00 | 2.203 | 6.79 | 0.18 | 5.3 | 94.5 | 0.2 | -0.53 | 0.81 | 0.84 | 2.00 | 3.0 | 0.005 | 0.67 | 0.0 | 0.04 | 17.26 | 0.00 | 2.069 | 11.40 | 0.18 | 6.7 | 93.3 | 0.1 | -0.47 | 0.37 | 0.80 | 0.83 | 2.01 | 53005 | 2624 | 24 | 1487 | 2 | 0 | 0 | logfile |
✔ | 7V2o | 31658 | 2023-10-02 | 2021-08-09 | 3.5 | 3.22 | 3.31 | 3.0 | 0.008 | 1.12 | 2.0 | 0.10 | 16.74 | 0.00 | 2.203 | 6.79 | 0.18 | 5.3 | 94.5 | 0.2 | -0.53 | 0.81 | 0.84 | 2.00 | 3.0 | 0.005 | 0.67 | 0.0 | 0.04 | 17.26 | 0.00 | 2.069 | 11.40 | 0.18 | 6.7 | 93.3 | 0.1 | -0.47 | 0.37 | 0.80 | 0.83 | 2.01 | 53005 | 2624 | 24 | 1487 | 2 | 0 | 0 | logfile |
✔ | 7V2o | 31658 | 2023-11-13 | 2021-08-09 | 3.5 | 3.22 | 3.31 | 3.0 | 0.008 | 1.12 | 2.0 | 0.10 | 16.74 | 0.00 | 2.203 | 6.79 | 0.18 | 5.3 | 94.5 | 0.2 | -0.53 | 0.81 | 0.84 | 2.00 | 3.0 | 0.005 | 0.67 | 0.0 | 0.04 | 17.26 | 0.00 | 2.069 | 11.40 | 0.18 | 6.7 | 93.3 | 0.1 | -0.47 | 0.37 | 0.80 | 0.83 | 2.01 | 53005 | 2624 | 24 | 1487 | 2 | 0 | 0 | logfile |
✔ | 7V2o | 31658 | 2023-12-07 | 2021-08-09 | 3.5 | 3.22 | 3.31 | 3.0 | 0.008 | 1.12 | 2.0 | 0.10 | 23.45 | 0.00 | 2.203 | 6.79 | 0.18 | 5.3 | 94.5 | 0.2 | -0.53 | 0.81 | 0.84 | 2.00 | 3.0 | 0.004 | 0.61 | 0.0 | 0.04 | 23.38 | 0.00 | 2.047 | 10.72 | 0.36 | 5.7 | 94.2 | 0.1 | -0.32 | 0.36 | 0.80 | 0.83 | 1.95 | 53005 | 2624 | 24 | 1487 | 2 | 0 | 0 | logfile |
✔ | 6PWF | 20507 | 2024-01-20 | 2019-07-22 | 4.07 | 4.13 | — | 4.1 | 0.009 | 1.01 | 0.0 | 0.06 | 26.98 | 0.01 | 2.066 | 6.15 | 0.11 | 9.8 | 90.2 | 0.0 | -6.10 | 0.64 | 0.76 | — | 4.1 | 0.004 | 0.66 | 0.0 | 0.04 | 26.90 | 0.00 | 2.060 | 11.29 | 0.00 | 6.9 | 93.1 | 0.0 | -2.60 | 1.13 | 0.64 | 0.76 | — | 15197 | 1208 | 11 | 292 | 0 | 0 | 0 | logfile |
✔ | 6PWF | 20507 | 2024-02-16 | 2019-07-22 | 4.07 | 4.13 | — | 4.1 | 0.009 | 1.01 | 0.0 | 0.06 | 26.98 | 0.01 | 2.066 | 6.15 | 0.11 | 9.8 | 90.2 | 0.0 | -6.10 | 0.64 | 0.76 | — | 4.1 | 0.004 | 0.66 | 0.0 | 0.04 | 26.90 | 0.00 | 2.060 | 11.29 | 0.00 | 6.9 | 93.1 | 0.0 | -2.60 | 1.13 | 0.64 | 0.76 | — | 15197 | 1208 | 11 | 292 | 0 | 0 | 0 | logfile |
✔ | 7YNC | 33958 | 2024-02-16 | 2022-07-30 | 3.14 | 3.40 | 3.24 | 3.4 | 0.003 | 0.65 | 0.0 | 0.04 | 18.05 | 0.01 | 2.130 | 6.93 | 1.04 | 10.6 | 89.4 | 0.1 | -4.51 | 0.77 | 0.84 | 2.55 | 3.4 | 0.003 | 0.64 | 0.0 | 0.04 | 18.46 | 0.00 | 2.136 | 6.30 | 2.75 | 11.5 | 88.5 | 0.0 | -2.01 | 1.16 | 0.78 | 0.87 | 2.40 | 13848 | 1536 | 3 | 66 | 0 | 0 | 0 | logfile |
✔ | 6PWF | 20507 | 2024-03-16 | 2019-07-22 | 4.07 | 4.13 | — | 4.1 | 0.009 | 1.01 | 0.0 | 0.06 | 26.98 | 0.01 | 2.066 | 6.15 | 0.11 | 9.8 | 90.2 | 0.0 | -6.10 | 0.64 | 0.76 | — | 4.1 | 0.004 | 0.66 | 0.0 | 0.04 | 26.90 | 0.00 | 2.060 | 11.29 | 0.00 | 6.9 | 93.1 | 0.0 | -2.60 | 1.13 | 0.64 | 0.76 | — | 15197 | 1208 | 11 | 292 | 0 | 0 | 0 | logfile |
✔ | 6PWF | 20507 | 2023-06-18 | 2019-07-22 | 4.07 | 4.13 | — | 4.1 | 0.009 | 1.01 | 0.0 | 0.06 | 26.91 | 0.01 | 2.066 | 6.15 | 0.11 | 9.8 | 90.2 | 0.0 | -6.10 | 0.64 | 0.76 | — | 4.1 | 0.003 | 0.65 | 0.0 | 0.04 | 27.03 | 0.00 | 2.125 | 11.76 | 0.11 | 5.0 | 95.0 | 0.0 | -2.42 | 1.16 | 0.64 | 0.75 | — | 15197 | 1208 | 11 | 292 | 0 | 0 | 0 | logfile |
✔ | 6PWF | 20507 | 2023-07-07 | 2019-07-22 | 4.07 | 4.13 | — | 4.1 | 0.009 | 1.01 | 0.0 | 0.06 | 26.91 | 0.01 | 2.066 | 6.15 | 0.11 | 9.8 | 90.2 | 0.0 | -6.10 | 0.64 | 0.76 | — | 4.1 | 0.003 | 0.65 | 0.0 | 0.04 | 27.03 | 0.00 | 2.125 | 11.76 | 0.11 | 5.0 | 95.0 | 0.0 | -2.42 | 1.16 | 0.64 | 0.75 | — | 15197 | 1208 | 11 | 292 | 0 | 0 | 0 | logfile |
✔ | 6PWF | 20507 | 2023-08-13 | 2019-07-22 | 4.07 | 4.13 | — | 4.1 | 0.009 | 1.01 | 0.0 | 0.06 | 26.91 | 0.01 | 2.066 | 6.15 | 0.11 | 9.8 | 90.2 | 0.0 | -6.10 | 0.64 | 0.76 | — | 4.1 | 0.003 | 0.65 | 0.0 | 0.04 | 27.03 | 0.00 | 2.125 | 11.76 | 0.11 | 5.0 | 95.0 | 0.0 | -2.42 | 1.16 | 0.64 | 0.75 | — | 15197 | 1208 | 11 | 292 | 0 | 0 | 0 | logfile |
✔ | 6PWF | 20507 | 2023-10-07 | 2019-07-22 | 4.07 | 4.13 | — | 4.1 | 0.009 | 1.01 | 0.0 | 0.06 | 26.91 | 0.01 | 2.066 | 6.15 | 0.11 | 9.8 | 90.2 | 0.0 | -6.10 | 0.64 | 0.76 | — | 4.1 | 0.003 | 0.66 | 0.0 | 0.04 | 27.01 | 0.00 | 2.070 | 11.68 | 0.00 | 5.7 | 94.3 | 0.0 | -2.28 | 1.15 | 0.64 | 0.75 | — | 15197 | 1208 | 11 | 292 | 0 | 0 | 0 | logfile |
✔ | 7CGE | 30355 | 2024-02-16 | 2020-07-01 | 2.9 | 3.03 | — | 3.0 | 0.011 | 1.49 | 0.0 | 0.06 | 20.89 | 0.01 | 2.198 | 4.85 | 0.95 | 11.2 | 88.2 | 0.6 | -5.74 | 0.77 | 0.86 | 2.99 | 3.0 | 0.003 | 0.87 | 1.0 | 0.04 | 17.98 | 0.00 | 2.018 | 6.79 | 2.43 | 9.4 | 90.5 | 0.1 | -0.45 | 0.56 | 0.78 | 0.88 | 2.20 | 16406 | 2092 | 16 | 0 | 12 | 0 | 0 | logfile |