The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8H9K | 34570 | 2025-02-11 | 2022-10-25 | 3.51 | 3.83 | 3.65 | 3.7 | 0.006 | 0.91 | 0.0 | 0.05 | 15.47 | 0.01 | 2.169 | 13.42 | 0.00 | 5.8 | 94.2 | 0.0 | -2.34 | 0.39 | 0.77 | 1.95 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3381 | 421 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 8EKE | 28200 | 2025-02-11 | 2022-09-20 | 3.36 | 3.79 | 3.34 | 3.7 | 0.002 | 0.45 | 0.0 | 0.04 | 10.50 | 0.00 | 2.313 | 5.20 | 2.71 | 2.5 | 97.2 | 0.3 | -0.29 | 0.78 | 0.72 | 2.45 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4681 | 610 | 2 | 0 | 0 | 0 | 0 | logfile |
✘ | 8J26 | 35945 | 2025-02-11 | 2023-04-14 | 3.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5406 | 427 | 6 | 90 | 1 | 0 | 0 | logfile |
✘ | 8H87 | 34531 | 2025-02-12 | 2022-10-21 | 2.53 | 2.73 | 2.50 | 2.7 | 0.011 | 1.55 | 0.0 | 0.08 | 18.83 | 0.02 | 2.300 | 4.49 | 0.91 | 2.3 | 97.7 | 0.0 | -1.32 | 0.58 | 0.79 | 4.94 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7083 | 777 | 6 | 0 | 48 | 147 | 0 | logfile |
✘ | 8EX5 | 28651 | 2025-02-10 | 2022-10-24 | 3.47 | 3.76 | 3.31 | 3.7 | 0.004 | 0.71 | 0.0 | 0.04 | 12.11 | 0.00 | 2.141 | 9.78 | 0.00 | 2.2 | 97.8 | 0.0 | 0.88 | 0.48 | 0.70 | 2.43 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3177 | 414 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 7SP1 | 25364 | 2025-02-11 | 2021-11-02 | 3.4 | 3.65 | — | 3.9 | 0.006 | 1.29 | 0.0 | 0.07 | 19.39 | 0.01 | 2.288 | 11.67 | 0.00 | 2.9 | 97.1 | 0.0 | -2.42 | 0.41 | 0.72 | 4.86 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4343 | 540 | 17 | 20 | 0 | 0 | 0 | logfile |
✘ | 8CHB | 16659 | 2025-02-13 | 2023-02-07 | 3.14 | 3.61 | 3.17 | 3.5 | 0.012 | 1.75 | 2.0 | 0.09 | 15.26 | 0.01 | 2.512 | 3.80 | 1.64 | 3.6 | 96.4 | 0.0 | -1.52 | 0.72 | 0.77 | 2.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8916 | 1158 | 2 | 0 | 0 | 0 | 0 | logfile |
✘ | 6VCC | 21148 | 2025-02-12 | 2019-12-20 | 3.6 | 3.10 | 3.54 | 3.5 | 0.004 | 0.66 | 0.0 | 0.05 | 12.50 | 0.01 | 2.253 | 4.58 | 0.00 | 3.6 | 96.4 | 0.0 | -4.54 | 0.53 | 0.68 | 2.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7572 | 936 | 12 | 0 | 0 | 0 | 0 | logfile |
✘ | 8BQV | 16188 | 2025-02-12 | 2023-01-18 | 2.0 | 1.96 | 1.89 | 1.9 | 0.008 | 1.01 | 0.0 | 0.07 | 8.75 | 0.00 | 0.000 | 15.13 | 0.00 | 6.8 | 93.2 | 0.0 | -2.59 | 0.54 | 0.77 | 8.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8595 | 1155 | 45 | 0 | 105 | 120 | 0 | logfile |
✘ | 8CE7 | 16600 | 2025-02-14 | 2023-02-01 | 2.7 | 2.34 | 2.46 | 2.7 | 0.010 | 1.47 | 12.0 | 0.09 | 13.19 | 0.01 | 0.000 | 16.57 | 3.33 | 9.0 | 91.0 | 0.0 | -3.63 | 0.44 | 0.73 | 6.36 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10512 | 1512 | 24 | 0 | 0 | 0 | 0 | logfile |
✘ | 8EMR | 28262 | 2025-02-12 | 2022-09-28 | 2.92 | 3.25 | 2.98 | 3.2 | 0.003 | 0.62 | 0.0 | 0.05 | 14.91 | 0.00 | 2.263 | 5.06 | 0.12 | 4.4 | 95.6 | 0.0 | -0.58 | 0.74 | 0.79 | 2.30 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7685 | 952 | 4 | 0 | 6 | 0 | 0 | logfile |
✘ | 7U16 | 26279 | 2025-02-11 | 2022-02-19 | 2.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3456 | 405 | 6 | 0 | 12 | 0 | 0 | logfile |
✘ | 6K42 | 9912 | 2025-02-13 | 2019-05-23 | 4.1 | 4.04 | — | 4.1 | 0.005 | 0.82 | 0.0 | 0.05 | 9.24 | 0.01 | 2.288 | 4.50 | 0.31 | 5.4 | 94.6 | 0.0 | -4.37 | 0.60 | 0.63 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8816 | 1116 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 8V6U | 42999 | 2025-02-12 | 2023-12-03 | 3.0 | 2.35 | — | 3.0 | 0.011 | 1.67 | 3.0 | 0.09 | 14.06 | 0.01 | 1.999 | 1.24 | 1.31 | 4.1 | 95.8 | 0.1 | 0.40 | 0.83 | 0.79 | 4.50 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8211 | 1090 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 8VBA | 43118 | 2025-02-13 | 2023-12-12 | 3.29 | 3.69 | 3.34 | 3.8 | 0.010 | 1.31 | 0.0 | 0.12 | 12.48 | 0.00 | 2.200 | 14.87 | 0.51 | 4.6 | 94.9 | 0.5 | -0.19 | 0.67 | 0.76 | 3.60 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9416 | 1260 | 4 | 0 | 39 | 0 | 0 | logfile |
✘ | 8DNX | 27583 | 2025-02-11 | 2022-07-12 | 2.98 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4342 | 549 | 8 | 0 | 1 | 0 | 71 | logfile |
✘ | 7RL4 | 24514 | 2025-02-11 | 2021-07-23 | 2.86 | 2.50 | — | 3.1 | 0.015 | 1.16 | 0.0 | 0.07 | 16.04 | 0.01 | 2.535 | 12.04 | 0.00 | 12.5 | 87.5 | 0.0 | -4.62 | 0.39 | 0.82 | 4.55 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4620 | 680 | 20 | 0 | 0 | 0 | 0 | logfile |
✘ | 7YH6 | 33820 | 2025-02-11 | 2022-07-12 | 3.4 | 3.90 | 3.35 | 3.7 | 0.005 | 0.64 | 0.0 | 0.05 | 13.19 | 0.00 | 2.161 | 8.14 | 0.00 | 7.1 | 92.7 | 0.2 | -0.87 | 0.66 | 0.86 | 3.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3343 | 430 | 4 | 0 | 1 | 0 | 0 | logfile |
✘ | 7ZRZ | 14923 | 2025-02-12 | 2022-05-05 | 3.09 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -0.27 | — | — | 2.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | 0.13 | — | — | — | 1.82 | 6580 | 617 | 5 | 77 | 0 | 0 | 0 | logfile |
✘ | 8H7Z | 34526 | 2025-02-11 | 2022-10-21 | 3.07 | 3.23 | 3.02 | 3.2 | 0.003 | 0.63 | 0.0 | 0.04 | 12.59 | 0.00 | 2.210 | 6.35 | 0.00 | 3.4 | 96.6 | 0.0 | -0.04 | 0.60 | 0.72 | 2.56 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4885 | 631 | 3 | 0 | 0 | 0 | 0 | logfile |