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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8HEZ | 34705 | 2024-07-18 | 2022-11-09 | 2.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4739 | 611 | 3 | 0 | 3 | 4 | 0 | logfile |
✘ | 8D1B | 27121 | 2024-07-19 | 2022-05-27 | 3.57 | 3.85 | 3.45 | 3.8 | 0.006 | 1.09 | 0.0 | 0.05 | 14.42 | 0.01 | 2.084 | 19.71 | 0.28 | 24.1 | 75.9 | 0.0 | -6.32 | 0.76 | 0.81 | 2.61 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6724 | 874 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 8GW7 | 34304 | 2024-07-19 | 2022-09-16 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7524 | 945 | 6 | 0 | 9 | 0 | 0 | logfile |
✘ | 7TFS | 25879 | 2024-07-20 | 2022-01-07 | 4.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11382 | 1414 | 14 | 0 | 28 | 0 | 0 | logfile |
✘ | 6XXE | 10648 | 2024-07-20 | 2020-01-27 | 3.49 | 2.31 | — | 3.3 | 0.007 | 1.09 | 0.0 | 0.06 | 11.82 | 0.00 | 2.471 | 6.11 | 2.27 | 11.0 | 89.0 | 0.0 | -4.99 | 0.62 | 0.57 | 3.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12816 | 1776 | 16 | 0 | 0 | 0 | 0 | logfile |
✘ | 3A5X | 1641 | 2024-07-18 | 2009-08-13 | 4.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -4.41 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3616 | 494 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 8JVH | 36674 | 2024-07-20 | 2023-06-28 | 3.19 | 3.79 | 3.33 | 3.7 | 0.005 | 0.78 | 0.0 | 0.05 | 9.56 | 0.00 | 2.195 | 2.24 | 0.18 | 8.6 | 91.4 | 0.0 | -4.48 | 0.65 | 0.74 | 1.98 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9699 | 1205 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 6PDT | 20309 | 2024-07-26 | 2019-06-19 | 3.8 | 3.95 | — | 3.9 | 0.022 | 2.06 | 0.0 | 0.10 | 11.59 | 0.01 | 1.771 | 0.92 | 0.00 | 1.9 | 97.7 | 0.4 | 0.40 | 0.73 | 0.73 | 1.74 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 31364 | 2000 | 8 | 0 | 12 | 0 | 15636 | logfile |
✘ | 8B3o | 15831 | 2024-07-23 | 2022-09-16 | 2.97 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -3.91 | — | — | 2.05 | — | — | — | — | — | — | — | — | — | — | — | — | — | 3.08 | — | — | — | 1.34 | 20475 | 2720 | 45 | 0 | 0 | 0 | 0 | logfile |
✘ | 6NEF | 9357 | 2024-07-25 | 2018-12-17 | 3.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29457 | 3663 | 18 | 0 | 63 | 0 | 0 | logfile |
✘ | 8QXo | 18734 | 2024-07-21 | 2023-10-24 | 3.43 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14291 | 1747 | 8 | 0 | 14 | 0 | 0 | logfile |
✘ | 8P4o | 17421 | 2024-07-26 | 2023-05-23 | 3.04 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 34605 | 4712 | 29 | 0 | 28 | 21 | 0 | logfile |
✘ | 8JPo | 36485 | 2024-07-20 | 2023-06-12 | 3.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11476 | 1466 | 4 | 0 | 8 | 0 | 0 | logfile |
✘ | 8TDW | 41175 | 2024-07-20 | 2023-07-05 | 3.04 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11359 | 1830 | 8 | 12 | 2 | 0 | 0 | logfile |
✘ | 8SS9 | 40748 | 2024-07-22 | 2023-05-08 | 2.72 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16319 | 1986 | 12 | 0 | 26 | 15 | 0 | logfile |
✘ | 8JV6 | 36669 | 2024-07-19 | 2023-06-27 | 3.43 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7458 | 948 | 6 | 0 | 15 | 0 | 0 | logfile |
✘ | 8HB0 | 34610 | 2024-07-18 | 2022-10-27 | 2.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4778 | 615 | 3 | 0 | 3 | 4 | 0 | logfile |
✘ | 8HG7 | 34737 | 2024-07-18 | 2022-11-14 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4808 | 619 | 3 | 0 | 3 | 2 | 0 | logfile |
✘ | 7P7L | 13239 | 2024-07-27 | 2021-07-19 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37587 | 4710 | 24 | 0 | 32 | 0 | 0 | logfile |
✘ | 6LN6 | 0925 | 2024-07-19 | 2019-12-28 | 2.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7836 | 1010 | 2 | 0 | 4 | 0 | 0 | logfile |