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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7SDE | 23517 | 2021-11-01 | 2021-09-29 | 3.2 | 3.37 | — | 3.3 | 0.004 | 0.92 | 1.0 | 0.06 | 17.03 | 0.00 | 2.201 | 25.84 | 8.60 | 10.6 | 89.1 | 0.3 | -4.65 | 0.74 | 0.77 | 2.50 | 3.3 | 0.005 | 0.79 | 0.0 | 0.04 | 17.42 | 0.01 | 2.165 | 10.50 | 0.17 | 7.2 | 92.8 | 0.0 | -0.25 | 0.61 | 0.75 | 0.79 | 2.41 | 5734 | 726 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VH3 | 31985 | 2021-11-02 | 2021-09-20 | 3.6 | 3.70 | — | 3.7 | 0.005 | 1.09 | 0.0 | 0.06 | 11.49 | 0.01 | 2.257 | 7.95 | 0.90 | 8.5 | 91.0 | 0.4 | -4.84 | 0.68 | 0.69 | 1.85 | 3.6 | 0.011 | 1.13 | 1.0 | 0.04 | 15.52 | 0.00 | 2.190 | 13.24 | 0.21 | 7.6 | 92.3 | 0.1 | -1.20 | 1.67 | 0.70 | 0.73 | 1.24 | 12749 | 1612 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VH1 | 31983 | 2021-11-02 | 2021-09-20 | 4.2 | 4.15 | — | 4.0 | 0.009 | 1.32 | 0.0 | 0.07 | 12.24 | 0.01 | 2.222 | 5.93 | 0.74 | 11.9 | 87.8 | 0.2 | -5.32 | 0.79 | 0.75 | — | 4.0 | 0.003 | 0.74 | 0.0 | 0.04 | 12.82 | 0.00 | 2.155 | 11.51 | 0.00 | 8.3 | 91.7 | 0.0 | -1.77 | 3.34 | 0.79 | 0.76 | — | 13156 | 1661 | 2 | 0 | 2 | 0 | 0 | logfile |
✔ | 7VGQ | 31975 | 2021-11-02 | 2021-09-18 | 4.0 | 4.26 | — | 4.2 | 0.009 | 1.27 | 2.0 | 0.07 | 12.16 | 0.01 | 2.211 | 7.11 | 0.74 | 13.9 | 85.9 | 0.2 | -5.44 | 0.71 | 0.75 | — | 4.2 | 0.004 | 0.75 | 0.0 | 0.04 | 15.07 | 0.01 | 2.128 | 9.16 | 0.20 | 7.4 | 92.5 | 0.1 | -2.07 | 0.72 | 0.70 | 0.76 | — | 13156 | 1661 | 2 | 0 | 2 | 0 | 0 | logfile |
✘ | 7PQE | 13591 | 2021-11-02 | 2021-09-17 | 3.7 | 3.72 | — | 3.6 | 0.006 | 0.68 | 0.0 | 0.04 | 13.13 | 0.00 | 2.107 | 12.28 | 0.09 | 5.6 | 94.4 | 0.0 | -1.09 | 0.81 | 0.82 | 2.85 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10746 | 1365 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 7VG3 | 31964 | 2021-11-01 | 2021-09-14 | 3.73 | 3.86 | — | 3.8 | 0.006 | 1.15 | 2.0 | 0.06 | 12.99 | 0.01 | 1.935 | 7.51 | 5.13 | 10.8 | 88.7 | 0.6 | -4.51 | 0.80 | 0.84 | 3.10 | 3.8 | 0.004 | 0.74 | 0.0 | 0.04 | 14.84 | 0.01 | 2.270 | 9.83 | 0.39 | 9.2 | 90.8 | 0.0 | -1.16 | 1.09 | 0.79 | 0.84 | 1.75 | 8118 | 860 | 4 | 62 | 3 | 0 | 0 | logfile |
✘ | 7PPo | 13583 | 2021-11-02 | 2021-09-14 | 2.91 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10991 | 1382 | 5 | 0 | 3 | 0 | 1 | logfile |
✔ | 7VG2 | 31963 | 2021-11-01 | 2021-09-14 | 3.1 | 2.73 | — | 3.0 | 0.016 | 1.43 | 1.0 | 0.09 | 12.86 | 0.01 | 1.822 | 17.56 | 1.74 | 8.0 | 91.8 | 0.2 | -3.84 | 0.72 | 0.79 | 3.83 | 3.0 | 0.004 | 0.67 | 0.0 | 0.04 | 14.08 | 0.01 | 2.163 | 14.49 | 0.27 | 6.9 | 93.1 | 0.0 | 0.00 | 1.24 | 0.72 | 0.79 | 2.22 | 8203 | 845 | 4 | 71 | 3 | 0 | 0 | logfile |
✔ | 7S66 | 24851 | 2021-11-03 | 2021-09-13 | 2.8 | 3.06 | 2.88 | 3.1 | 0.013 | 1.34 | 0.0 | 0.06 | 10.54 | 0.01 | 1.770 | 2.28 | 0.00 | 1.4 | 98.6 | 0.0 | 0.50 | 0.75 | 0.83 | 3.82 | 3.0 | 0.004 | 0.54 | 0.0 | 0.04 | 16.37 | 0.00 | 1.940 | 5.64 | 2.29 | 1.8 | 98.2 | 0.0 | 0.93 | 1.37 | 0.75 | 0.86 | 3.51 | 23242 | 2910 | 12 | 0 | 24 | 0 | 0 | logfile |
✔ | 7S67 | 24852 | 2021-11-03 | 2021-09-13 | 3.8 | 3.64 | 3.80 | 3.9 | 0.013 | 1.39 | 0.0 | 0.07 | 11.90 | 0.01 | 1.815 | 5.58 | 0.00 | 1.5 | 98.5 | 0.0 | 0.25 | 0.70 | 0.73 | 2.10 | 3.8 | 0.004 | 0.76 | 0.0 | 0.05 | 16.27 | 0.01 | 1.977 | 14.79 | 0.78 | 2.6 | 97.4 | 0.0 | -0.13 | 2.77 | 0.71 | 0.80 | 1.45 | 23058 | 2892 | 12 | 0 | 24 | 0 | 0 | logfile |
✔ | 7S65 | 24850 | 2021-11-03 | 2021-09-13 | 3.2 | 3.04 | 3.23 | 3.3 | 0.014 | 1.46 | 0.0 | 0.07 | 11.66 | 0.01 | 1.385 | 8.25 | 0.26 | 2.0 | 98.0 | 0.0 | 0.19 | 0.64 | 0.74 | 3.55 | 3.2 | 0.012 | 0.89 | 0.0 | 0.04 | 15.78 | 0.01 | 1.895 | 10.39 | 0.35 | 2.7 | 97.3 | 0.0 | 0.25 | 0.70 | 0.66 | 0.79 | 3.13 | 22049 | 2760 | 12 | 0 | 24 | 0 | 0 | logfile |
✔ | 7PMY | 13544 | 2021-11-02 | 2021-09-04 | 3.8 | 4.01 | 3.75 | 3.9 | 0.002 | 0.46 | 0.0 | 0.04 | 9.15 | 0.00 | 2.008 | 5.14 | 1.40 | 2.0 | 97.9 | 0.2 | 0.55 | 0.66 | 0.79 | 2.91 | 3.9 | 0.005 | 0.59 | 0.0 | 0.04 | 12.34 | 0.00 | 1.955 | 8.00 | 0.18 | 3.8 | 96.2 | 0.0 | 0.89 | 0.82 | 0.65 | 0.80 | 1.82 | 10499 | 659 | 2 | 0 | 0 | 0 | 5276 | logfile |
✔ | 7PN1 | 13545 | 2021-11-02 | 2021-09-04 | 3.9 | 4.15 | 3.83 | 4.0 | 0.002 | 0.57 | 0.0 | 0.04 | 12.95 | 0.00 | 2.053 | 6.26 | 0.00 | 2.8 | 97.2 | 0.0 | 1.31 | 0.61 | 0.80 | 1.17 | 4.0 | 0.008 | 1.19 | 0.0 | 0.04 | 14.95 | 0.01 | 1.932 | 9.35 | 0.18 | 2.2 | 97.8 | 0.0 | 1.43 | 0.99 | 0.61 | 0.80 | 0.84 | 10384 | 657 | 1 | 0 | 0 | 0 | 5237 | logfile |
✔ | 7PMW | 13542 | 2021-11-02 | 2021-09-03 | 4.1 | 4.24 | 4.05 | 4.1 | 0.002 | 0.47 | 1.0 | 0.04 | 9.25 | 0.00 | 2.047 | 8.47 | 0.91 | 2.8 | 97.2 | 0.0 | 0.56 | 0.58 | 0.75 | — | 4.1 | 0.004 | 0.57 | 0.0 | 0.04 | 11.62 | 0.00 | 1.995 | 11.04 | 0.00 | 4.3 | 95.7 | 0.0 | 0.80 | 1.21 | 0.58 | 0.76 | — | 10153 | 643 | 2 | 0 | 0 | 0 | 5123 | logfile |
✔ | 7PMX | 13543 | 2021-11-02 | 2021-09-03 | 3.5 | 3.85 | 3.50 | 3.7 | 0.003 | 0.54 | 0.0 | 0.04 | 10.52 | 0.00 | 2.134 | 6.34 | 2.13 | 3.2 | 96.8 | 0.0 | 0.60 | 0.61 | 0.80 | 1.97 | 3.7 | 0.003 | 0.57 | 0.0 | 0.04 | 13.10 | 0.00 | 2.069 | 9.22 | 0.35 | 4.9 | 95.1 | 0.0 | 1.16 | 1.02 | 0.61 | 0.79 | 1.48 | 10417 | 659 | 2 | 0 | 0 | 0 | 5253 | logfile |
✔ | 7S1W | 24806 | 2021-11-24 | 2021-09-02 | 3.09 | 3.45 | — | 3.4 | 0.011 | 0.89 | 0.0 | 0.05 | 9.15 | 0.01 | 2.104 | 12.21 | 0.22 | 1.5 | 98.5 | 0.0 | -1.53 | 0.77 | 0.86 | 5.52 | 3.4 | 0.005 | 0.64 | 0.0 | 0.04 | 13.97 | 0.00 | 2.112 | 9.15 | 0.43 | 2.2 | 97.8 | 0.0 | -0.22 | 0.63 | 0.76 | 0.87 | 4.89 | 248700 | 31200 | 120 | 0 | 60 | 0 | 0 | logfile |
✔ | 7S0D | 24787 | 2021-11-04 | 2021-08-30 | 3.5 | 3.80 | — | 3.7 | 0.005 | 0.88 | 2.0 | 0.05 | 13.46 | 0.01 | 1.969 | 18.29 | 0.13 | 6.0 | 93.4 | 0.6 | -0.74 | 0.66 | 0.78 | 1.75 | 3.7 | 0.010 | 1.07 | 2.0 | 0.05 | 15.51 | 0.01 | 2.058 | 15.22 | 0.30 | 5.9 | 93.9 | 0.1 | -0.52 | 0.57 | 0.67 | 0.80 | 1.65 | 33623 | 4383 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 7S0E | 24788 | 2021-11-01 | 2021-08-30 | 4.9 | 4.98 | — | 4.8 | 0.004 | 0.87 | 0.0 | 0.05 | 13.44 | 0.01 | 1.886 | 21.60 | 1.22 | 8.1 | 91.3 | 0.7 | -1.76 | 0.77 | 0.67 | — | 4.8 | 0.003 | 0.74 | 0.0 | 0.05 | 13.06 | 0.00 | 2.128 | 19.30 | 0.00 | 8.5 | 91.3 | 0.2 | -1.68 | 1.27 | 0.78 | 0.72 | — | 8248 | 1076 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7S0C | 24786 | 2021-11-04 | 2021-08-30 | 3.25 | 3.47 | — | 3.5 | 0.012 | 0.92 | 2.0 | 0.06 | 13.34 | 0.01 | 1.762 | 13.58 | 0.19 | 5.1 | 94.7 | 0.2 | -0.32 | 0.69 | 0.81 | 2.60 | 3.4 | 0.013 | 0.89 | 1.0 | 0.05 | 14.23 | 0.01 | 1.801 | 12.22 | 0.19 | 3.5 | 96.4 | 0.2 | 0.34 | 0.92 | 0.68 | 0.78 | 2.30 | 29598 | 3818 | 16 | 0 | 31 | 0 | 0 | logfile |
✔ | 7RZ9 | 24755 | 2021-11-04 | 2021-08-27 | 4.15 | 3.58 | — | 4.1 | 0.007 | 0.98 | 0.0 | 0.05 | 10.41 | 0.01 | 2.264 | 3.39 | 0.26 | 5.6 | 94.4 | 0.0 | -5.15 | 0.68 | 0.80 | — | 4.1 | 0.003 | 0.63 | 0.0 | 0.04 | 13.21 | 0.00 | 2.179 | 9.80 | 0.07 | 3.9 | 96.1 | 0.0 | -0.39 | 1.46 | 0.70 | 0.79 | — | 27934 | 3550 | 4 | 0 | 0 | 0 | 0 | logfile |