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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7S8B | 24892 | 2024-03-18 | 2021-09-17 | 2.43 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21124 | 2448 | 8 | 0 | 46 | 0 | 0 | logfile |
✘ | 5GW4 | 9540 | 2024-03-12 | 2016-09-08 | 4.7 | 4.89 | — | 4.8 | 0.001 | 0.42 | 0.0 | 0.04 | 7.26 | 0.00 | 2.187 | 6.49 | 0.00 | 4.3 | 95.6 | 0.1 | -3.58 | 0.77 | 0.66 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 64544 | 8446 | 16 | 0 | 0 | 0 | 0 | logfile |
✘ | 6V8X | 21111 | 2024-03-19 | 2019-12-12 | 3.0 | 3.33 | — | 3.2 | 0.017 | 1.48 | 9.0 | 0.08 | 15.17 | 0.01 | 2.180 | 4.31 | 0.23 | 8.5 | 90.6 | 0.9 | -3.90 | 0.82 | 0.77 | 2.66 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24825 | 2997 | 54 | 0 | 105 | 0 | 0 | logfile |
✘ | 7EJ1 | 31148 | 2024-03-18 | 2021-04-01 | 3.2 | 3.37 | — | 3.3 | 0.011 | 1.03 | 0.0 | 0.06 | 16.48 | 0.01 | 2.243 | 6.80 | 0.00 | 4.8 | 95.0 | 0.1 | -5.79 | 0.83 | 0.86 | 3.00 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21236 | 2740 | 12 | 0 | 4 | 0 | 0 | logfile |
✘ | 6WJV | 21701 | 2024-03-18 | 2020-04-14 | 3.5 | 3.60 | — | 3.5 | 0.009 | 1.66 | 1.0 | 0.08 | 15.51 | 0.01 | 1.466 | 5.97 | 0.05 | 7.2 | 92.8 | 0.0 | -5.50 | 0.75 | 0.66 | 0.87 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19593 | 2567 | 5 | 0 | 1 | 0 | 0 | logfile |
✘ | 7YZP | 14393 | 2024-03-17 | 2022-02-21 | 4.0 | 4.15 | 4.02 | 4.0 | 0.003 | 0.62 | 1.0 | 0.04 | 17.72 | 0.00 | 1.593 | 8.32 | 0.00 | 4.2 | 95.8 | 0.0 | 0.73 | 0.83 | 0.78 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14107 | 1633 | 9 | 59 | 8 | 0 | 0 | logfile |
✘ | 6PM5 | 20388 | 2024-03-16 | 2019-07-01 | 3.1 | 3.38 | — | 3.4 | 0.002 | 0.49 | 0.0 | 0.06 | 11.10 | 0.00 | 2.275 | 4.99 | 0.00 | 2.4 | 97.6 | 0.0 | -4.42 | 0.52 | 0.78 | 3.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13975 | 1735 | 15 | 0 | 15 | 0 | 0 | logfile |
✘ | 7WWU | 32873 | 2024-03-19 | 2022-02-14 | 3.5 | 3.60 | — | 3.5 | 0.003 | 0.60 | 0.0 | 0.04 | 15.51 | 0.00 | 2.159 | 9.10 | 0.11 | 8.8 | 91.2 | 0.0 | -1.71 | 0.74 | 0.78 | 2.33 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18864 | 2400 | 10 | 50 | 0 | 0 | 0 | logfile |
✘ | 7NUR | 12600 | 2024-03-11 | 2021-03-13 | 3.125 | 3.29 | — | 3.3 | 0.007 | 0.77 | 0.0 | 0.05 | 14.31 | 0.01 | 2.174 | 5.26 | 0.11 | 7.7 | 92.0 | 0.3 | -4.11 | 0.77 | 0.87 | 3.09 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8245 | 1044 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 7WTG | 32785 | 2024-03-10 | 2022-02-04 | 3.8 | 3.93 | — | 3.9 | 0.006 | 1.20 | 0.0 | 0.07 | 14.44 | 0.01 | 2.297 | 4.61 | 0.00 | 9.1 | 90.9 | 0.0 | -2.94 | 0.67 | 0.73 | 2.60 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3318 | 425 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7XL3 | 33271 | 2024-03-20 | 2022-04-21 | 3.13 | 3.20 | — | 3.2 | 0.002 | 0.39 | 0.0 | 0.04 | 12.03 | 0.00 | 2.263 | 4.77 | 1.08 | 2.9 | 97.1 | 0.0 | -4.73 | 0.73 | 0.79 | 2.68 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25700 | 3480 | 8 | 0 | 3 | 0 | 0 | logfile |
✘ | 6ZY9 | 11555 | 2024-03-16 | 2020-07-30 | 3.3 | 3.42 | — | 3.5 | 0.004 | 0.81 | 0.0 | 0.05 | 13.73 | 0.01 | 2.174 | 2.45 | 0.25 | 4.7 | 95.3 | 0.0 | -5.76 | 0.62 | 0.71 | 1.14 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14973 | 1985 | 14 | 0 | 4 | 0 | 0 | logfile |
✘ | 6oMB | 20124 | 2024-03-18 | 2019-04-18 | 3.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21815 | 2775 | 11 | 0 | 48 | 0 | 0 | logfile |
✘ | 6DG7 | 7882 | 2024-03-17 | 2018-05-17 | 3.32 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16720 | 1955 | 29 | 0 | 40 | 5 | 0 | logfile |
✘ | 6ioL | 9696 | 2024-03-25 | 2018-10-30 | 3.76 | 3.62 | 3.77 | 3.8 | 0.005 | 0.97 | 0.0 | 0.06 | 10.77 | 0.01 | 2.201 | 5.12 | 0.33 | 5.6 | 94.4 | 0.0 | -4.06 | 0.63 | 0.80 | 2.11 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 49077 | 6450 | 12 | 0 | 0 | 0 | 0 | logfile |
✘ | 7EDA | 31062 | 2024-03-19 | 2021-03-15 | 2.78 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22843 | 2567 | 32 | 0 | 67 | 16 | 0 | logfile |
✘ | 6DG8 | 7883 | 2024-03-17 | 2018-05-17 | 3.89 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16715 | 1955 | 24 | 0 | 40 | 0 | 0 | logfile |
✘ | 7R5M | 14331 | 2024-03-15 | 2022-02-11 | 3.3 | 3.09 | 3.20 | 3.2 | 0.006 | 0.94 | 0.0 | 0.06 | 14.64 | 0.00 | 2.411 | 1.26 | 0.80 | 4.6 | 95.4 | 0.0 | -0.79 | 0.70 | 0.80 | 2.46 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11295 | 1491 | 9 | 0 | 0 | 0 | 0 | logfile |
✘ | 3JCU | 6617 | 2024-03-16 | 2016-03-10 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 75994 | 7648 | 76 | 0 | 322 | 0 | 0 | logfile |
✘ | 6ZGK | 11209 | 2024-03-15 | 2020-06-18 | 3.6 | 3.77 | 3.64 | 3.8 | 0.006 | 0.68 | 0.0 | 0.05 | 12.30 | 0.01 | 2.111 | 7.47 | 0.00 | 6.6 | 93.4 | 0.0 | -0.58 | 0.50 | 0.54 | 1.42 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11630 | 1535 | 5 | 0 | 0 | 0 | 0 | logfile |