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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6oCE | 20017 | 2023-12-09 | 2019-03-23 | 4.9 | 4.11 | — | 4.0 | 0.006 | 0.73 | 0.0 | 0.04 | 8.07 | 0.01 | 1.868 | 8.56 | 0.00 | 9.9 | 90.1 | 0.0 | -4.37 | 0.45 | 0.60 | — | 4.0 | 0.003 | 0.76 | 0.0 | 0.04 | 12.52 | 0.01 | 2.176 | 12.97 | 0.00 | 12.3 | 87.7 | 0.0 | -2.82 | 1.19 | 0.46 | 0.63 | — | 11228 | 1378 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Q0J | 20550 | 2023-12-08 | 2019-08-01 | 4.9 | 4.69 | — | 4.1 | 0.012 | 1.53 | 3.0 | 0.09 | 8.72 | 0.00 | 2.229 | 2.10 | 0.00 | 5.4 | 93.3 | 1.3 | -2.84 | 0.74 | 0.63 | — | 4.2 | 0.002 | 0.67 | 0.0 | 0.04 | 8.51 | 0.00 | 1.946 | 5.63 | 0.00 | 6.2 | 93.4 | 0.4 | 0.10 | 1.61 | 0.85 | 0.79 | — | 8213 | 1633 | 8 | 0 | 6 | 0 | 0 | logfile |
✔ | 7KPW | 22990 | 2023-12-07 | 2020-11-12 | 4.9 | 5.04 | 4.74 | 4.9 | 0.009 | 1.54 | 4.0 | 0.10 | 1.89 | 0.01 | 2.279 | 3.61 | 0.00 | 3.9 | 94.9 | 1.2 | 4.09 | 0.75 | 0.67 | — | 4.9 | 0.003 | 0.73 | 0.0 | 0.04 | 5.85 | 0.00 | 2.148 | 2.79 | 0.00 | 11.5 | 87.9 | 0.6 | -0.50 | 2.04 | 0.82 | 0.82 | — | 4313 | 865 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ELE | 31182 | 2023-12-09 | 2021-04-09 | 4.9 | 8.62 | — | 7.5 | 0.007 | 1.16 | 0.0 | 0.06 | 21.16 | 0.01 | 2.210 | 17.86 | 8.44 | 9.1 | 90.1 | 0.8 | -3.55 | 0.87 | 0.71 | — | 7.5 | 0.004 | 0.77 | 0.0 | 0.04 | 18.23 | 0.00 | 2.016 | 31.77 | 0.10 | 9.8 | 90.0 | 0.2 | -1.69 | 1.68 | 0.88 | 0.77 | — | 10733 | 1137 | 2 | 83 | 0 | 0 | 0 | logfile |
✔ | 7PD4 | 13330 | 2023-12-08 | 2021-08-04 | 4.9 | 4.13 | — | 7.8 | 0.005 | 0.87 | 0.0 | 0.05 | 14.59 | 0.00 | 2.035 | 38.59 | 0.00 | 11.7 | 88.3 | 0.0 | -4.80 | 0.73 | 0.72 | — | 7.8 | 0.003 | 0.78 | 0.0 | 0.04 | 13.56 | 0.00 | 2.126 | 18.85 | 0.00 | 5.8 | 94.2 | 0.0 | -0.39 | 1.28 | 0.73 | 0.73 | — | 6676 | 842 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 3iZK | 5247 | 2023-12-08 | 2010-10-29 | 4.9 | 4.48 | — | 7.1 | 0.014 | 1.48 | 16.0 | 0.08 | 12.45 | 0.02 | 2.461 | 2.38 | 0.77 | 2.0 | 97.5 | 0.4 | -1.62 | 0.65 | 0.48 | — | 6.9 | 0.003 | 0.75 | 0.0 | 0.04 | 13.81 | 0.00 | 2.233 | 21.48 | 0.00 | 2.7 | 97.3 | 0.0 | -0.42 | 1.96 | 0.75 | 0.55 | — | 58448 | 7856 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EXQ | 28659 | 2023-12-08 | 2022-10-25 | 4.9 | 5.40 | 5.55 | 6.0 | 0.020 | 1.74 | 0.0 | 0.10 | 10.28 | 0.01 | 2.002 | 1.81 | 0.00 | 2.5 | 97.3 | 0.2 | 0.34 | 0.52 | 0.45 | — | 6.0 | 0.003 | 0.74 | 0.0 | 0.04 | 12.89 | 0.00 | 2.068 | 17.98 | 0.00 | 5.3 | 94.5 | 0.2 | -0.50 | 2.54 | 0.58 | 0.63 | — | 9304 | 1108 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8HiA | 34813 | 2023-12-08 | 2022-11-19 | 4.9 | 4.49 | 2.13 | 9.6 | 0.001 | 0.36 | 0.0 | 0.05 | 15.83 | 0.00 | 2.251 | 1.11 | 2.86 | 12.1 | 87.6 | 0.2 | -4.39 | 0.47 | 0.07 | — | 9.3 | 0.006 | 0.76 | 0.0 | 0.05 | 13.94 | 0.01 | 2.113 | 35.97 | 4.76 | 9.5 | 90.5 | 0.0 | -6.92 | 12.60 | 0.69 | 0.30 | — | 7200 | 460 | 20 | 0 | 0 | 0 | 3660 | logfile |
✔ | 8DS6 | 27684 | 2023-12-09 | 2022-07-21 | 4.9 | 4.18 | 4.54 | 3.7 | 0.012 | 1.43 | 0.0 | 0.06 | 10.65 | 0.01 | 2.494 | 0.39 | 0.00 | 1.4 | 98.6 | 0.0 | 1.06 | 0.85 | 0.67 | — | 3.7 | 0.003 | 0.58 | 0.0 | 0.04 | 11.48 | 0.01 | 2.242 | 9.67 | 0.00 | 2.1 | 97.9 | 0.0 | 1.82 | 1.11 | 0.85 | 0.63 | — | 10135 | 669 | 2 | 0 | 0 | 0 | 5107 | logfile |
✔ | 7P2Q | 13172 | 2023-12-07 | 2021-07-06 | 4.9 | 4.54 | — | 4.3 | 0.004 | 0.84 | 0.0 | 0.05 | 9.06 | 0.01 | 2.264 | 4.17 | 0.00 | 5.0 | 95.0 | 0.0 | -3.09 | 0.77 | 0.72 | — | 4.3 | 0.003 | 0.77 | 0.0 | 0.04 | 12.69 | 0.00 | 2.167 | 12.63 | 0.00 | 5.4 | 94.6 | 0.0 | -0.58 | 1.66 | 0.80 | 0.74 | — | 4780 | 587 | 5 | 0 | 5 | 0 | 0 | logfile |
✔ | 8A5Y | 15199 | 2023-12-08 | 2022-06-16 | 4.9 | 5.07 | 4.78 | 4.9 | 0.004 | 0.88 | 4.0 | 0.05 | 13.25 | 0.00 | 1.998 | 18.51 | 0.05 | 3.9 | 95.8 | 0.4 | 0.86 | 0.85 | 0.76 | — | 4.9 | 0.004 | 0.72 | 0.0 | 0.04 | 13.57 | 0.00 | 2.062 | 18.06 | 0.02 | 4.7 | 95.1 | 0.2 | 0.46 | 0.68 | 0.86 | 0.78 | — | 57866 | 7213 | 18 | 0 | 3 | 0 | 0 | logfile |
✔ | 6VAB | 21135 | 2023-12-07 | 2019-12-17 | 4.9 | 6.51 | — | 6.8 | 0.005 | 0.91 | 0.0 | 0.06 | 8.70 | 0.01 | 2.264 | 14.98 | 0.00 | 6.8 | 93.2 | 0.0 | -3.84 | 0.71 | 0.69 | — | 6.6 | 0.004 | 0.69 | 0.0 | 0.04 | 4.96 | 0.00 | 2.132 | 7.42 | 0.00 | 8.6 | 91.4 | 0.0 | -0.31 | 2.71 | 0.73 | 0.69 | — | 4642 | 938 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7P2P | 13171 | 2023-12-07 | 2021-07-06 | 4.9 | 4.40 | 5.09 | 4.3 | 0.005 | 1.10 | 0.0 | 0.07 | 11.50 | 0.01 | 2.325 | 4.27 | 0.19 | 8.1 | 91.9 | 0.0 | -3.94 | 0.76 | 0.66 | — | 4.2 | 0.003 | 0.80 | 0.0 | 0.05 | 12.90 | 0.00 | 2.167 | 16.98 | 0.19 | 8.1 | 91.9 | 0.0 | -1.73 | 1.08 | 0.78 | 0.72 | — | 4783 | 587 | 5 | 0 | 5 | 0 | 0 | logfile |
✘ | 6UPK | 20840 | 2023-12-10 | 2019-10-17 | 4.9 | 7.69 | 6.08 | 7.1 | 0.005 | 0.94 | 0.0 | 0.05 | 20.42 | 0.01 | 1.570 | 20.39 | 0.00 | 7.2 | 92.8 | 0.0 | -3.94 | 0.89 | 0.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13861 | 1314 | 10 | 144 | 54 | 0 | 0 | logfile |
✔ | 3J6F | 5896 | 2023-12-09 | 2014-02-19 | 4.9 | 4.97 | — | 4.9 | 0.021 | 2.64 | 64.0 | 0.14 | 14.01 | 0.01 | 2.069 | 5.57 | 0.14 | 3.1 | 96.3 | 0.6 | -1.05 | 0.62 | 0.66 | — | 4.9 | 0.003 | 0.75 | 0.0 | 0.05 | 14.43 | 0.01 | 1.807 | 20.81 | 0.06 | 2.9 | 97.1 | 0.0 | 0.36 | 2.79 | 0.68 | 0.81 | — | 60903 | 7686 | 45 | 9 | 18 | 36 | 0 | logfile |
✔ | 6R23 | 4708 | 2023-12-07 | 2019-03-15 | 4.9 | 4.57 | — | 4.6 | 0.006 | 1.07 | 0.0 | 0.05 | 16.56 | 0.01 | 2.332 | 7.52 | 0.00 | 7.9 | 92.1 | 0.0 | -4.61 | 0.60 | 0.75 | — | 4.6 | 0.003 | 0.61 | 0.0 | 0.04 | 16.41 | 0.00 | 2.466 | 11.77 | 0.00 | 9.0 | 91.0 | 0.0 | -0.07 | 3.42 | 0.60 | 0.74 | — | 1518 | 182 | 2 | 0 | 0 | 0 | 0 | logfile |
✘ | 6UXB | 20932 | 2023-12-09 | 2019-11-07 | 4.9 | 5.50 | — | 6.0 | 0.005 | 0.77 | 0.0 | 0.06 | 4.56 | 0.00 | 2.627 | 0.00 | 0.00 | 3.8 | 96.2 | 0.0 | -2.56 | 0.74 | 0.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10344 | 2104 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7BWA | 30231 | 2023-12-09 | 2020-04-14 | 4.9 | 5.10 | 4.70 | 4.8 | 0.004 | 0.77 | 0.0 | 0.05 | 15.31 | 0.00 | 1.970 | 41.05 | 0.00 | 13.4 | 86.6 | 0.0 | -4.15 | 0.80 | 0.64 | — | 4.8 | 0.003 | 0.74 | 0.0 | 0.05 | 14.14 | 0.00 | 2.136 | 19.42 | 0.00 | 7.9 | 92.1 | 0.0 | -2.97 | 1.69 | 0.79 | 0.60 | — | 11670 | 1444 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 4CE4 | 2490 | 2023-12-09 | 2013-11-08 | 4.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 65473 | 3572 | 40 | 1437 | 984 | 0 | 0 | logfile |
✔ | 6PWC | 20505 | 2023-12-07 | 2019-07-22 | 4.9 | 5.55 | — | 4.5 | 0.003 | 0.67 | 0.0 | 0.05 | 4.68 | 0.01 | 2.345 | 2.19 | 0.00 | 1.3 | 98.7 | 0.0 | -0.09 | 0.61 | 0.67 | — | 4.6 | 0.004 | 0.75 | 0.0 | 0.04 | 6.37 | 0.00 | 2.094 | 19.59 | 0.00 | 7.2 | 92.8 | 0.0 | -0.38 | 1.57 | 0.61 | 0.59 | — | 5879 | 1055 | 5 | 0 | 0 | 0 | 0 | logfile |