The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7BP3 | 30143 | 2023-02-17 | 2020-03-21 | 3.8 | 4.06 | — | 4.1 | 0.007 | 1.05 | 0.0 | 0.06 | 16.16 | 0.01 | 2.235 | 6.34 | 0.00 | 7.4 | 92.6 | 0.0 | -4.77 | 0.48 | 0.75 | 0.86 | 4.1 | 0.004 | 0.88 | 0.0 | 0.05 | 17.93 | 0.00 | 2.102 | 16.43 | 0.31 | 6.3 | 93.7 | 0.0 | -0.15 | 1.32 | 0.49 | 0.74 | 1.21 | 6080 | 788 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7BX8 | 30236 | 2023-02-22 | 2020-04-17 | 3.6 | 3.87 | 3.75 | 3.8 | 0.008 | 1.31 | 0.0 | 0.08 | 13.92 | 0.01 | 2.299 | 10.31 | 1.37 | 11.6 | 88.4 | 0.1 | -4.54 | 0.66 | 0.80 | 1.62 | 3.8 | 0.004 | 0.78 | 0.0 | 0.04 | 15.22 | 0.00 | 2.141 | 12.69 | 0.93 | 7.0 | 93.0 | 0.0 | -1.05 | 1.74 | 0.67 | 0.83 | 1.55 | 16304 | 2232 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6NBH | 0411 | 2023-02-19 | 2018-12-07 | 3.5 | 4.06 | — | 4.0 | 0.005 | 0.86 | 0.0 | 0.05 | 8.34 | 0.00 | 2.357 | 1.79 | 0.20 | 2.6 | 97.4 | 0.0 | -1.51 | 0.62 | 0.76 | 1.73 | 4.0 | 0.003 | 0.72 | 0.0 | 0.04 | 15.72 | 0.00 | 2.193 | 11.77 | 0.51 | 2.7 | 97.3 | 0.0 | 0.46 | 2.20 | 0.58 | 0.74 | 1.66 | 9502 | 1159 | 7 | 0 | 10 | 0 | 0 | logfile |
✔ | 7VGJ | 31971 | 2023-02-20 | 2021-09-16 | 3.98 | 3.67 | — | 3.5 | 0.007 | 0.91 | 0.0 | 0.05 | 15.32 | 0.01 | 2.160 | 26.07 | 0.48 | 16.4 | 83.6 | 0.0 | -3.55 | 0.62 | 0.78 | 2.06 | 3.5 | 0.003 | 0.71 | 0.0 | 0.04 | 16.65 | 0.00 | 2.182 | 15.76 | 0.40 | 10.9 | 89.1 | 0.0 | -1.97 | 0.44 | 0.61 | 0.77 | 1.69 | 11460 | 1414 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 6V6D | 21071 | 2023-02-20 | 2019-12-05 | 3.77 | 3.87 | — | 3.8 | 0.005 | 0.95 | 0.0 | 0.06 | 13.31 | 0.01 | 2.280 | 6.03 | 0.00 | 2.0 | 98.0 | 0.0 | -2.17 | 0.63 | 0.85 | 3.10 | 3.8 | 0.003 | 0.69 | 0.0 | 0.04 | 16.07 | 0.00 | 2.153 | 6.45 | 0.30 | 2.1 | 97.9 | 0.0 | 1.50 | 0.66 | 0.63 | 0.85 | 2.95 | 11739 | 1463 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XEW | 33161 | 2023-02-23 | 2022-03-31 | 2.59 | 3.02 | 2.88 | 3.0 | 0.003 | 0.70 | 0.0 | 0.04 | 13.28 | 0.01 | 2.210 | 10.97 | 1.10 | 5.5 | 94.0 | 0.5 | 0.26 | 0.75 | 0.85 | 2.67 | 3.0 | 0.003 | 0.67 | 0.0 | 0.04 | 16.08 | 0.00 | 2.306 | 7.85 | 2.80 | 4.1 | 95.8 | 0.2 | 1.06 | 0.46 | 0.73 | 0.86 | 2.29 | 19988 | 2456 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6NBi | 0412 | 2023-02-19 | 2018-12-07 | 4.0 | 4.43 | — | 4.3 | 0.005 | 0.88 | 0.0 | 0.05 | 8.85 | 0.00 | 2.337 | 2.35 | 0.31 | 2.8 | 97.2 | 0.0 | -1.70 | 0.62 | 0.74 | — | 4.3 | 0.003 | 0.79 | 0.0 | 0.04 | 16.22 | 0.00 | 2.115 | 18.96 | 0.72 | 2.7 | 97.3 | 0.0 | -0.13 | 2.54 | 0.64 | 0.78 | — | 9195 | 1141 | 7 | 0 | 3 | 0 | 0 | logfile |
✔ | 7D7E | 30606 | 2023-02-21 | 2020-10-03 | 3.4 | 3.70 | — | 3.6 | 0.007 | 0.75 | 0.0 | 0.05 | 16.50 | 0.00 | 1.870 | 8.29 | 10.81 | 8.8 | 91.0 | 0.2 | -3.24 | 0.65 | 0.84 | 2.83 | 3.6 | 0.003 | 0.61 | 0.0 | 0.04 | 16.14 | 0.00 | 2.168 | 5.23 | 0.42 | 6.0 | 94.0 | 0.0 | 0.16 | 1.21 | 0.75 | 0.89 | 2.51 | 15501 | 1878 | 8 | 0 | 13 | 0 | 0 | logfile |
✔ | 6iRA | 9714 | 2023-02-24 | 2018-11-12 | 4.5 | 5.18 | — | 5.1 | 0.009 | 1.42 | 13.0 | 0.07 | 8.45 | 0.01 | 1.413 | 20.24 | 0.12 | 10.0 | 89.1 | 0.9 | -3.53 | 0.60 | 0.69 | — | 5.1 | 0.004 | 0.81 | 0.0 | 0.05 | 12.47 | 0.00 | 2.118 | 21.30 | 0.08 | 8.8 | 90.9 | 0.3 | -1.42 | 2.19 | 0.61 | 0.73 | — | 23932 | 3080 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Q3G | 13791 | 2023-02-23 | 2021-10-27 | 3.5 | 4.05 | 3.44 | 3.7 | 0.004 | 0.64 | 0.0 | 0.05 | 13.01 | 0.00 | 2.142 | 10.52 | 0.00 | 6.6 | 93.4 | 0.0 | -0.94 | 0.71 | 0.71 | 3.02 | 3.7 | 0.004 | 0.64 | 0.0 | 0.04 | 14.82 | 0.00 | 2.174 | 10.58 | 0.10 | 6.1 | 93.9 | 0.0 | -0.19 | 0.67 | 0.77 | 0.85 | 2.76 | 19570 | 2585 | 10 | 0 | 5 | 0 | 0 | logfile |
✔ | 7ZGo | 14709 | 2023-02-18 | 2022-04-04 | 2.55 | 2.04 | 2.53 | 2.6 | 0.008 | 1.24 | 0.0 | 0.06 | 16.84 | 0.00 | 2.170 | 9.40 | 0.00 | 3.4 | 96.6 | 0.0 | 1.35 | 0.50 | 0.76 | 3.14 | 2.6 | 0.002 | 0.50 | 0.0 | 0.04 | 16.48 | 0.00 | 2.254 | 8.96 | 0.52 | 3.1 | 96.9 | 0.0 | 2.18 | 1.09 | 0.53 | 0.79 | 3.51 | 7754 | 940 | 6 | 0 | 21 | 24 | 0 | logfile |
✔ | 6W5V | 21549 | 2023-02-22 | 2020-03-13 | 4.0 | 4.11 | — | 4.0 | 0.008 | 1.35 | 4.0 | 0.18 | 17.76 | 0.01 | 1.979 | 62.54 | 9.99 | 7.0 | 92.3 | 0.7 | -2.21 | 0.63 | 0.75 | — | 4.0 | 0.003 | 0.85 | 0.0 | 0.05 | 17.25 | 0.01 | 2.049 | 15.50 | 0.35 | 5.7 | 94.3 | 0.0 | -0.42 | 0.87 | 0.63 | 0.77 | — | 10586 | 1307 | 9 | 0 | 24 | 0 | 0 | logfile |
✔ | 7ZRD | 14911 | 2023-02-20 | 2022-05-04 | 3.3 | 3.45 | 3.22 | 3.4 | 0.004 | 0.81 | 0.0 | 0.05 | 15.86 | 0.01 | 2.272 | 5.42 | 0.00 | 4.1 | 95.9 | 0.0 | -0.83 | 0.70 | 0.84 | 1.89 | 3.4 | 0.004 | 0.56 | 0.0 | 0.04 | 16.03 | 0.00 | 2.168 | 9.28 | 0.26 | 4.0 | 96.0 | 0.0 | 0.91 | 0.36 | 0.69 | 0.86 | 2.02 | 11037 | 1452 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 6LRS | 0960 | 2023-02-27 | 2020-01-16 | 3.37 | 2.99 | — | 3.4 | 0.006 | 1.04 | 0.0 | 0.06 | 10.05 | 0.01 | 2.260 | 10.82 | 0.38 | 6.7 | 93.3 | 0.0 | -5.21 | 0.63 | 0.74 | 2.94 | 3.4 | 0.003 | 0.69 | 0.0 | 0.04 | 15.06 | 0.00 | 2.117 | 19.64 | 0.76 | 4.7 | 95.3 | 0.0 | -1.74 | 0.72 | 0.66 | 0.78 | 2.42 | 30156 | 3832 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XoY | 33363 | 2023-02-20 | 2022-05-01 | 4.25 | 4.23 | 4.31 | 4.3 | 0.006 | 0.73 | 0.0 | 0.05 | 12.51 | 0.00 | 2.255 | 45.15 | 8.23 | 10.2 | 88.7 | 1.2 | -2.66 | 0.80 | 0.81 | — | 4.3 | 0.003 | 0.72 | 0.0 | 0.04 | 11.97 | 0.01 | 2.081 | 12.49 | 0.00 | 8.4 | 91.6 | 0.1 | -1.07 | 0.85 | 0.81 | 0.83 | — | 13264 | 1832 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 7XER | 33158 | 2023-02-23 | 2022-03-31 | 2.47 | 2.87 | 2.81 | 2.9 | 0.003 | 0.74 | 0.0 | 0.04 | 13.01 | 0.00 | 2.219 | 12.08 | 0.23 | 5.3 | 94.5 | 0.2 | -0.04 | 0.73 | 0.82 | 2.14 | 2.9 | 0.004 | 0.61 | 0.0 | 0.04 | 16.27 | 0.00 | 2.174 | 8.26 | 1.47 | 3.9 | 95.9 | 0.2 | 0.87 | 1.51 | 0.72 | 0.85 | 2.11 | 20084 | 2456 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 7FHo | 31588 | 2023-02-23 | 2021-07-29 | 2.8 | 2.98 | — | 3.1 | 0.002 | 0.57 | 0.0 | 0.04 | 12.96 | 0.00 | 2.179 | 6.20 | 0.17 | 3.1 | 96.9 | 0.0 | 1.34 | 0.64 | 0.80 | 3.27 | 3.0 | 0.003 | 0.56 | 0.0 | 0.04 | 15.70 | 0.00 | 2.142 | 6.86 | 0.61 | 2.8 | 97.2 | 0.0 | 2.82 | 1.11 | 0.65 | 0.84 | 2.97 | 10648 | 1294 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 6M79 | 30128 | 2023-02-27 | 2020-03-18 | 3.1 | 3.20 | 3.11 | 3.2 | 0.008 | 0.75 | 0.0 | 0.05 | 14.66 | 0.00 | 2.067 | 5.52 | 3.99 | 3.9 | 96.1 | 0.0 | -0.35 | 0.74 | 0.80 | 2.93 | 3.2 | 0.005 | 0.65 | 0.0 | 0.04 | 15.56 | 0.00 | 2.134 | 5.39 | 0.44 | 3.3 | 96.7 | 0.0 | 0.58 | 0.51 | 0.75 | 0.85 | 3.03 | 15324 | 1842 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 6QM9 | 4592 | 2023-02-19 | 2019-02-01 | 3.6 | 3.72 | 3.65 | 3.7 | 0.005 | 0.89 | 0.0 | 0.05 | 15.52 | 0.01 | 2.275 | 3.74 | 0.00 | 3.2 | 96.8 | 0.0 | -6.09 | 0.74 | 0.84 | 2.64 | 3.7 | 0.003 | 0.66 | 0.0 | 0.04 | 16.73 | 0.00 | 2.167 | 8.54 | 0.52 | 3.5 | 96.5 | 0.0 | 0.54 | 0.56 | 0.75 | 0.84 | 1.82 | 10878 | 1346 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 6F07 | 4163 | 2023-02-19 | 2017-11-17 | 3.6 | 3.68 | — | 3.7 | 0.007 | 0.96 | 0.0 | 0.05 | 10.28 | 0.01 | 0.559 | 5.81 | 0.70 | 6.1 | 93.7 | 0.2 | -3.04 | 0.47 | 0.57 | 1.27 | 3.6 | 0.003 | 0.65 | 0.0 | 0.04 | 15.63 | 0.00 | 2.144 | 10.92 | 0.44 | 4.0 | 96.0 | 0.0 | 0.95 | 1.54 | 0.56 | 0.70 | 0.71 | 10149 | 1227 | 4 | 0 | 2 | 0 | 0 | logfile |