The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 5MM2 | 3528 | 2022-04-04 | 2016-12-08 | 2.7 | 12.53 | 1.51 | — | 0.011 | 1.29 | 0.0 | 0.07 | 10.78 | 0.01 | 1.325 | 19.72 | 0.54 | 12.1 | 87.0 | 0.8 | -3.96 | -0.08 | -0.03 | 0.63 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6605 | 854 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 6MiX | 9132 | 2022-04-09 | 2018-09-20 | 3.6 | 4.57 | — | 14.0 | 0.007 | 1.18 | 0.0 | 0.07 | 16.40 | 0.01 | 2.212 | 9.79 | 2.30 | 14.6 | 85.0 | 0.4 | -5.69 | -0.03 | 0.00 | 0.22 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 43120 | 5348 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 5A7U | 3079 | 2022-04-04 | 2015-07-10 | 4.8 | 3.82 | — | 4.6 | 0.020 | 3.41 | 3.0 | 0.25 | 21.78 | 0.08 | 2.651 | 28.57 | 25.00 | 24.0 | 72.0 | 4.0 | -6.05 | -0.01 | 0.31 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 455 | 27 | 1 | 0 | 1 | 0 | 231 | logfile |
✘ | 7oJH | 12951 | 2022-04-04 | 2021-05-15 | 3.1 | 2.57 | 4.80 | 20.0 | 0.011 | 0.90 | 0.0 | 0.05 | 11.01 | 0.00 | 2.239 | 2.98 | 0.52 | 2.9 | 97.1 | 0.0 | 0.37 | 0.00 | 0.00 | -0.81 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8999 | 1138 | 4 | 0 | 5 | 0 | 0 | logfile |
✘ | 5AJ0 | 2875 | 2022-04-21 | 2015-02-19 | 3.5 | 11.12 | — | — | 0.011 | 1.61 | 31.0 | 0.09 | 16.14 | 0.01 | 0.414 | 42.84 | 8.00 | 5.7 | 89.8 | 4.5 | 0.77 | 0.00 | 0.00 | 0.09 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 218559 | 11738 | 106 | 5776 | 355 | 0 | 0 | logfile |
✘ | 5X1G | 6701 | 2022-04-04 | 2017-01-25 | 4.5 | 7.89 | — | 37.0 | 0.008 | 1.42 | 0.0 | 0.05 | 10.05 | 0.01 | 2.345 | 27.78 | 0.00 | 6.9 | 93.1 | 0.0 | -2.75 | 0.00 | 0.01 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 155 | 31 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5M6S | 3451 | 2022-04-04 | 2016-10-25 | 4.8 | 5.27 | — | 6.5 | 0.005 | 0.84 | 0.0 | 0.04 | 27.97 | 0.00 | 2.447 | 23.24 | 44.05 | 7.3 | 89.6 | 3.1 | -5.37 | 0.01 | 0.04 | — | 5.3 | 0.003 | 0.66 | 0.0 | 0.03 | 19.58 | 0.00 | 1.949 | 10.68 | 0.00 | 6.2 | 93.8 | 0.0 | 2.28 | 2.49 | 0.03 | 0.06 | — | 1593 | 98 | 1 | 0 | 0 | 0 | 793 | logfile |
✔ | 5MSH | 3565 | 2022-04-04 | 2017-01-04 | 4.25 | 3.96 | — | 20.0 | 0.014 | 1.56 | 0.0 | 0.07 | 9.56 | 0.01 | 2.323 | 3.07 | 0.00 | 6.1 | 92.5 | 1.5 | -0.93 | 0.01 | 0.02 | — | 3.7 | 0.009 | 1.40 | 0.0 | 0.05 | 13.33 | 0.01 | 2.113 | 15.72 | 0.00 | 6.4 | 93.4 | 0.2 | -0.82 | 2.65 | 0.04 | 0.13 | — | 4287 | 551 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6EK0 | 3883 | 2022-04-21 | 2017-09-24 | 2.9 | 3.27 | — | 40.0 | 0.012 | 1.13 | 0.0 | 0.06 | 16.18 | 0.03 | 0.883 | 4.04 | 0.81 | 9.4 | 90.4 | 0.3 | -5.00 | 0.02 | 0.00 | 0.01 | 3.2 | 0.005 | 1.01 | 0.0 | 0.04 | 18.19 | 0.01 | 1.000 | 22.19 | 3.38 | 10.8 | 89.1 | 0.1 | -3.11 | 0.96 | 0.13 | 0.18 | 0.11 | 219596 | 11719 | 128 | 5864 | 412 | 61 | 0 | logfile |
✘ | 7A5K | 11646 | 2022-04-11 | 2020-08-21 | 3.7 | 3.12 | 3.69 | 40.0 | 0.014 | 1.28 | 3.0 | 0.06 | 17.54 | 0.01 | 1.211 | 7.11 | 0.05 | 10.7 | 88.9 | 0.3 | -4.20 | 0.03 | 0.00 | 0.14 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 171126 | 14163 | 108 | 2644 | 165 | 0 | 0 | logfile |
✔ | 6KKR | 0701 | 2022-04-04 | 2019-07-27 | 2.9 | 2.91 | — | 20.0 | 0.008 | 1.10 | 0.0 | 0.06 | 10.99 | 0.01 | 2.348 | 3.23 | 0.23 | 3.9 | 96.1 | 0.0 | -3.53 | 0.05 | 0.00 | -0.07 | 2.8 | 0.003 | 0.77 | 0.0 | 0.04 | 13.11 | 0.00 | 2.105 | 13.45 | 2.15 | 4.1 | 95.9 | 0.0 | 0.35 | 1.64 | 0.12 | 0.11 | 0.38 | 8416 | 1074 | 4 | 0 | 24 | 0 | 0 | logfile |
✔ | 5NV3 | 3699 | 2022-04-08 | 2017-05-03 | 3.39 | 3.43 | — | 3.4 | 0.007 | 1.21 | 2.0 | 0.07 | 14.58 | 0.00 | 2.164 | 3.27 | 0.94 | 5.6 | 94.2 | 0.2 | -2.82 | 0.09 | 0.16 | 3.78 | 3.4 | 0.020 | 1.19 | 0.0 | 0.04 | 16.57 | 0.00 | 1.942 | 8.64 | 0.15 | 3.4 | 96.6 | 0.0 | -0.40 | 1.63 | 0.59 | 0.75 | 3.92 | 37816 | 4768 | 24 | 0 | 16 | 0 | 0 | logfile |
✔ | 7LJ3 | 23388 | 2022-04-07 | 2021-01-28 | 2.9 | 2.92 | — | 3.4 | 0.005 | 0.72 | 0.0 | 0.04 | 17.12 | 0.00 | 1.041 | 27.61 | 3.30 | 3.6 | 96.0 | 0.4 | 0.29 | 0.10 | 0.23 | -0.14 | 2.9 | 0.010 | 0.89 | 0.0 | 0.03 | 19.65 | 0.01 | 1.899 | 9.09 | 4.21 | 5.0 | 94.9 | 0.2 | 2.05 | 1.40 | 0.22 | 0.78 | 1.86 | 25714 | 2564 | 12 | 225 | 0 | 0 | 0 | logfile |
✘ | 6KKT | 0702 | 2022-04-04 | 2019-07-27 | 2.9 | 2.94 | — | 7.1 | 0.010 | 1.15 | 0.0 | 0.06 | 11.12 | 0.01 | 2.343 | 4.35 | 0.34 | 3.6 | 96.4 | 0.0 | -3.62 | 0.12 | 0.00 | 0.17 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8416 | 1074 | 4 | 0 | 24 | 0 | 0 | logfile |
✘ | 5YWP | 6855 | 2022-04-06 | 2017-11-29 | 4.6 | 5.26 | — | 20.0 | 0.005 | 0.98 | 0.0 | 0.05 | 9.48 | 0.01 | 2.023 | 48.26 | 0.00 | 7.3 | 92.1 | 0.6 | -3.63 | 0.12 | 0.02 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19561 | 2588 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 5M5H | 4155 | 2022-04-04 | 2016-10-21 | 4.5 | 2.29 | — | 2.2 | 0.007 | 1.50 | 0.0 | 0.08 | 12.37 | 0.01 | 2.186 | 39.89 | 0.00 | 8.7 | 88.9 | 2.4 | -5.94 | 0.14 | 0.14 | — | 2.1 | 0.004 | 0.94 | 0.0 | 0.05 | 12.39 | 0.01 | 2.260 | 21.55 | 0.00 | 7.9 | 92.1 | 0.0 | -1.85 | 2.19 | 0.15 | 0.14 | — | 1086 | 132 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6KFK | 9974 | 2022-04-05 | 2019-07-08 | 4.1 | 4.28 | — | 15.0 | 0.015 | 1.99 | 0.0 | 0.08 | 10.94 | 0.01 | 1.444 | 20.13 | 0.00 | 8.2 | 89.5 | 2.2 | -1.03 | 0.14 | 0.06 | — | 4.2 | 0.004 | 0.96 | 0.0 | 0.05 | 12.82 | 0.00 | 2.072 | 21.12 | 0.00 | 8.3 | 90.8 | 0.9 | -1.45 | 2.85 | 0.24 | 0.31 | — | 65076 | 8844 | 22 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Q97 | 4476 | 2022-04-16 | 2018-12-17 | 3.9 | 3.69 | — | 20.0 | 0.011 | 1.20 | 0.0 | 0.16 | 18.93 | 0.02 | 1.320 | 6.98 | 0.38 | 10.1 | 89.8 | 0.1 | -5.34 | 0.15 | 0.01 | 0.22 | 3.6 | 0.008 | 1.00 | 0.0 | 0.05 | 20.31 | 0.01 | 0.925 | 23.58 | 0.12 | 10.6 | 89.4 | 0.0 | -3.47 | 2.14 | 0.26 | 0.21 | 0.31 | 156609 | 6124 | 72 | 5051 | 441 | 2 | 0 | logfile |
✔ | 6RED | 4850 | 2022-04-08 | 2019-04-12 | 3.0 | 3.22 | 3.14 | 27.0 | 0.012 | 1.04 | 0.0 | 0.06 | 14.48 | 0.01 | 2.140 | 5.83 | 0.31 | 4.7 | 95.2 | 0.1 | -3.86 | 0.16 | 0.02 | 0.19 | 27.0 | 0.008 | 0.95 | 1.0 | 0.04 | 16.14 | 0.01 | 1.576 | 21.90 | 2.38 | 4.8 | 95.0 | 0.2 | -1.22 | 0.93 | 0.24 | 0.15 | 0.26 | 33899 | 4503 | 25 | 0 | 10 | 0 | 0 | logfile |
✔ | 6FLQ | 4275 | 2022-04-07 | 2018-01-26 | 3.6 | 3.93 | 3.76 | 40.0 | 0.016 | 1.33 | 0.0 | 0.07 | 14.73 | 0.01 | 1.897 | 5.97 | 1.40 | 10.8 | 89.1 | 0.1 | -4.32 | 0.16 | 0.02 | 0.21 | 3.6 | 0.008 | 1.04 | 1.0 | 0.04 | 16.84 | 0.01 | 1.605 | 17.69 | 0.04 | 8.4 | 91.5 | 0.1 | -1.51 | 1.95 | 0.24 | 0.17 | 0.16 | 30201 | 3868 | 10 | 91 | 3 | 0 | 0 | logfile |