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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7oTo | 13063 | 2023-02-19 | 2021-06-10 | 3.4 | 2.27 | — | 1.3 | 0.013 | 1.84 | 0.0 | 0.11 | 15.17 | 0.01 | 1.799 | 3.86 | 0.00 | 1.5 | 98.5 | 0.0 | 2.59 | 0.76 | 0.74 | 1.63 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10333 | 1313 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7N5D | 24186 | 2023-02-23 | 2021-06-05 | 2.8 | 2.25 | — | 1.3 | 0.023 | 1.52 | 0.0 | 0.09 | 9.91 | 0.01 | 2.378 | 0.32 | 0.00 | 1.1 | 98.9 | 0.0 | 1.83 | 0.84 | 0.83 | 4.14 | 1.3 | 0.003 | 0.64 | 0.0 | 0.04 | 16.00 | 0.00 | 2.173 | 6.93 | 1.62 | 1.9 | 98.1 | 0.0 | 2.44 | 0.66 | 0.82 | 0.82 | 3.20 | 20593 | 2612 | 14 | 0 | 7 | 0 | 0 | logfile |
✔ | 7USM | 26739 | 2023-02-20 | 2022-04-25 | 2.7 | 2.25 | — | 1.5 | 0.003 | 0.61 | 0.0 | 0.04 | 12.70 | 0.01 | 2.109 | 6.35 | 0.00 | 3.9 | 96.1 | 0.0 | -0.89 | 0.72 | 0.68 | 2.45 | 1.6 | 0.004 | 0.72 | 0.0 | 0.05 | 16.20 | 0.00 | 2.103 | 9.89 | 1.60 | 4.2 | 95.8 | 0.0 | -0.64 | 0.47 | 0.74 | 0.72 | 2.37 | 11893 | 1521 | 5 | 0 | 15 | 0 | 0 | logfile |
✔ | 7UDS | 26458 | 2023-02-22 | 2022-03-20 | 3.1 | 2.25 | 3.26 | 1.5 | 0.004 | 0.65 | 0.0 | 0.04 | 13.86 | 0.00 | 2.015 | 10.59 | 0.00 | 4.8 | 95.2 | 0.0 | -0.23 | 0.73 | 0.69 | 2.60 | 1.5 | 0.004 | 0.67 | 0.0 | 0.05 | 15.81 | 0.00 | 2.107 | 10.89 | 0.22 | 4.8 | 95.2 | 0.0 | -0.34 | 0.28 | 0.75 | 0.73 | 2.28 | 17032 | 2094 | 32 | 0 | 53 | 0 | 0 | logfile |
✔ | 7SiL | 25143 | 2023-02-20 | 2021-10-14 | 2.7 | 1.97 | — | 1.5 | 0.004 | 0.68 | 0.0 | 0.05 | 13.57 | 0.00 | 2.160 | 6.65 | 0.15 | 2.1 | 97.9 | 0.0 | 0.60 | 0.75 | 0.72 | 3.10 | 1.6 | 0.004 | 0.60 | 0.0 | 0.04 | 15.99 | 0.00 | 2.177 | 8.17 | 1.70 | 3.0 | 97.0 | 0.0 | 0.52 | 0.39 | 0.77 | 0.78 | 2.92 | 12924 | 1564 | 8 | 0 | 34 | 0 | 0 | logfile |
✔ | 7MDW | 23782 | 2023-02-17 | 2021-04-06 | 3.58 | 2.25 | 3.45 | 1.5 | 0.002 | 0.54 | 0.0 | 0.04 | 12.63 | 0.00 | 2.293 | 8.46 | 0.00 | 6.5 | 93.5 | 0.0 | -1.58 | 0.52 | 0.44 | 1.65 | 1.5 | 0.004 | 0.68 | 0.0 | 0.05 | 14.76 | 0.00 | 2.170 | 17.08 | 0.28 | 11.9 | 88.1 | 0.0 | -3.01 | 1.34 | 0.56 | 0.49 | 1.78 | 3392 | 435 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 7R40 | 14250 | 2023-02-27 | 2022-02-08 | 2.9 | 2.41 | 2.92 | 1.5 | 0.003 | 0.71 | 0.0 | 0.05 | 13.90 | 0.01 | 2.324 | 4.76 | 0.00 | 4.8 | 95.2 | 0.0 | -2.66 | 0.68 | 0.63 | 1.24 | 1.6 | 0.004 | 0.75 | 0.0 | 0.05 | 16.28 | 0.00 | 2.142 | 15.18 | 2.53 | 5.9 | 94.1 | 0.0 | -1.37 | 0.70 | 0.72 | 0.69 | 1.57 | 30615 | 3840 | 24 | 0 | 51 | 0 | 0 | logfile |
✔ | 7N5E | 24187 | 2023-02-22 | 2021-06-05 | 2.8 | 2.16 | 2.68 | 1.5 | 0.023 | 1.54 | 0.0 | 0.09 | 10.26 | 0.01 | 2.378 | 0.36 | 0.00 | 1.2 | 98.8 | 0.0 | 1.87 | 0.80 | 0.80 | 4.07 | 1.9 | 0.003 | 0.58 | 0.0 | 0.04 | 16.11 | 0.00 | 2.127 | 6.31 | 1.10 | 1.8 | 98.2 | 0.0 | 2.74 | 0.58 | 0.78 | 0.79 | 3.16 | 17915 | 2176 | 14 | 0 | 7 | 0 | 0 | logfile |
✔ | 7UAF | 26423 | 2023-02-22 | 2022-03-12 | 2.4 | 2.07 | 3.04 | 1.6 | 0.012 | 1.80 | 13.0 | 0.10 | 13.79 | 0.02 | 1.783 | 1.19 | 0.16 | 3.1 | 96.9 | 0.0 | -0.18 | 0.80 | 0.80 | 5.45 | 1.6 | 0.003 | 0.60 | 0.0 | 0.04 | 17.00 | 0.00 | 1.994 | 6.71 | 2.16 | 3.6 | 96.4 | 0.0 | 0.15 | 1.19 | 0.83 | 0.83 | 4.11 | 17864 | 2131 | 22 | 0 | 58 | 0 | 0 | logfile |
✔ | 7SiM | 25144 | 2023-02-20 | 2021-10-14 | 2.7 | 2.00 | — | 1.6 | 0.005 | 0.69 | 0.0 | 0.05 | 13.44 | 0.00 | 2.302 | 7.90 | 0.07 | 1.7 | 98.3 | 0.0 | 0.36 | 0.74 | 0.72 | 3.19 | 1.7 | 0.003 | 0.53 | 0.0 | 0.04 | 15.81 | 0.00 | 2.187 | 8.61 | 1.11 | 1.6 | 98.4 | 0.0 | 0.58 | 0.93 | 0.76 | 0.78 | 3.17 | 12826 | 1564 | 8 | 0 | 28 | 0 | 0 | logfile |
✔ | 7XJG | 33226 | 2023-02-20 | 2022-04-17 | 2.51 | 2.02 | 2.63 | 1.6 | 0.005 | 0.71 | 0.0 | 0.05 | 22.26 | 0.01 | 1.962 | 7.64 | 3.44 | 4.1 | 95.9 | 0.0 | -0.23 | 0.76 | 0.76 | 2.80 | 1.6 | 0.004 | 0.57 | 0.0 | 0.04 | 21.98 | 0.00 | 2.113 | 7.40 | 4.28 | 3.9 | 96.1 | 0.0 | 0.70 | 0.25 | 0.79 | 0.79 | 2.46 | 13167 | 1066 | 12 | 216 | 2 | 0 | 0 | logfile |
✔ | 7UWN | 26837 | 2023-02-19 | 2022-05-03 | 3.01 | 2.26 | 3.04 | 1.6 | 0.004 | 0.62 | 0.0 | 0.04 | 16.48 | 0.00 | 2.105 | 14.51 | 2.21 | 6.1 | 93.9 | 0.0 | -1.09 | 0.66 | 0.63 | 1.06 | 1.5 | 0.003 | 0.62 | 0.0 | 0.04 | 16.58 | 0.00 | 2.124 | 14.56 | 0.26 | 6.0 | 94.0 | 0.0 | -1.06 | 0.32 | 0.66 | 0.63 | 0.79 | 10602 | 1325 | 12 | 0 | 11 | 0 | 0 | logfile |
✔ | 7M4U | 23666 | 2023-02-21 | 2021-03-22 | 2.71 | 1.78 | — | 1.6 | 0.006 | 0.58 | 2.0 | 0.04 | 14.94 | 0.02 | 1.771 | 4.42 | 0.20 | 3.1 | 96.7 | 0.2 | 1.08 | 0.79 | 0.76 | 3.70 | 1.6 | 0.004 | 0.76 | 0.0 | 0.04 | 16.09 | 0.01 | 1.732 | 5.99 | 2.36 | 3.6 | 96.2 | 0.2 | 0.59 | 1.72 | 0.82 | 0.81 | 3.40 | 51764 | 2386 | 27 | 1528 | 84 | 191 | 0 | logfile |
✔ | 8CS9 | 26960 | 2023-02-23 | 2022-05-12 | 2.74 | 1.95 | — | 1.6 | 0.006 | 0.84 | 0.0 | 0.05 | 18.24 | 0.01 | 2.218 | 10.19 | 3.66 | 2.2 | 97.5 | 0.3 | 0.33 | 0.82 | 0.81 | 3.50 | 1.6 | 0.003 | 0.66 | 0.0 | 0.04 | 17.96 | 0.00 | 2.134 | 8.25 | 2.63 | 1.9 | 98.1 | 0.0 | 1.54 | 0.38 | 0.83 | 0.83 | 3.46 | 60944 | 7677 | 39 | 0 | 27 | 268 | 0 | logfile |
✔ | 7SEP | 25074 | 2023-02-18 | 2021-10-01 | 3.8 | 2.53 | 3.76 | 1.6 | 0.006 | 0.66 | 0.0 | 0.05 | 12.76 | 0.01 | 2.155 | 10.23 | 8.22 | 5.0 | 95.0 | 0.0 | -0.19 | 0.72 | 0.72 | 2.36 | 2.0 | 0.004 | 0.75 | 0.0 | 0.05 | 17.02 | 0.01 | 2.160 | 15.37 | 0.72 | 3.5 | 96.5 | 0.0 | -0.44 | 0.96 | 0.72 | 0.71 | 2.13 | 7641 | 930 | 2 | 0 | 0 | 0 | 0 | logfile |
✘ | 7P13 | 13154 | 2023-02-21 | 2021-07-01 | 2.29 | 1.96 | 2.28 | 1.7 | 0.016 | 1.06 | 0.0 | 0.07 | 14.07 | 0.01 | 2.430 | 5.24 | 0.00 | 3.3 | 96.7 | 0.0 | 2.06 | 0.82 | 0.87 | 4.22 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13727 | 1743 | 7 | 0 | 0 | 0 | 154 | logfile |
✔ | 7S8L | 24896 | 2023-02-18 | 2021-09-18 | 2.45 | 2.08 | 2.46 | 1.7 | 0.003 | 0.56 | 0.0 | 0.04 | 12.22 | 0.00 | 2.238 | 2.45 | 0.00 | 3.5 | 96.5 | 0.0 | 1.27 | 0.81 | 0.80 | 4.28 | 1.6 | 0.003 | 0.61 | 0.0 | 0.04 | 15.52 | 0.00 | 2.231 | 3.14 | 1.70 | 3.2 | 96.8 | 0.0 | 1.39 | 0.34 | 0.84 | 0.84 | 3.79 | 8177 | 1096 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7S3H | 24823 | 2023-02-19 | 2021-09-06 | 2.5 | 2.10 | 2.54 | 1.7 | 0.009 | 1.08 | 0.0 | 0.05 | 16.86 | 0.01 | 2.234 | 3.77 | 0.11 | 3.7 | 96.3 | 0.0 | -1.50 | 0.75 | 0.71 | 1.79 | 1.7 | 0.003 | 0.64 | 0.0 | 0.04 | 18.76 | 0.00 | 2.130 | 12.44 | 1.96 | 2.8 | 97.2 | 0.0 | -0.10 | 0.74 | 0.78 | 0.76 | 1.99 | 9966 | 1030 | 4 | 75 | 1 | 0 | 0 | logfile |
✔ | 7oUF | 13075 | 2023-02-21 | 2021-06-11 | 3.0 | 2.26 | 3.10 | 1.7 | 0.005 | 0.56 | 0.0 | 0.04 | 17.36 | 0.00 | 1.686 | 6.18 | 0.14 | 1.8 | 98.2 | 0.0 | 0.10 | 0.78 | 0.75 | 3.06 | 1.6 | 0.003 | 0.68 | 0.0 | 0.04 | 19.84 | 0.01 | 1.946 | 10.11 | 1.99 | 2.3 | 97.7 | 0.0 | 0.00 | 1.74 | 0.79 | 0.80 | 2.77 | 15094 | 1664 | 16 | 80 | 10 | 12 | 0 | logfile |
✔ | 7oUG | 13076 | 2023-02-21 | 2021-06-11 | 3.1 | 2.33 | 3.12 | 1.7 | 0.004 | 0.74 | 0.0 | 0.04 | 17.59 | 0.01 | 1.769 | 5.66 | 0.14 | 2.4 | 97.6 | 0.0 | 0.28 | 0.78 | 0.75 | 2.41 | 1.7 | 0.003 | 0.66 | 0.0 | 0.04 | 19.44 | 0.00 | 1.919 | 9.41 | 0.48 | 2.1 | 97.9 | 0.0 | 0.04 | 0.63 | 0.78 | 0.79 | 2.36 | 15090 | 1664 | 16 | 80 | 10 | 8 | 0 | logfile |