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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7LC9 | 23270 | 2023-12-07 | 2021-01-10 | 3.2 | 3.25 | — | 3.1 | 0.004 | 0.72 | 0.0 | 0.05 | 17.46 | 0.00 | 1.884 | 31.60 | 18.58 | 13.4 | 86.6 | 0.0 | -4.15 | 0.71 | 0.77 | -0.84 | 3.1 | 0.003 | 0.67 | 0.0 | 0.05 | 16.66 | 0.00 | 2.060 | 26.52 | 1.18 | 10.8 | 89.2 | 0.0 | -3.54 | 0.68 | 0.68 | 0.78 | 0.44 | 3497 | 525 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RJU | 4906 | 2023-12-07 | 2019-04-29 | 3.2 | 4.49 | 2.14 | 10.0 | 0.007 | 0.93 | 0.0 | 0.05 | 15.36 | 0.00 | 2.423 | 4.52 | 0.00 | 11.6 | 88.4 | 0.0 | -7.10 | 0.22 | -0.01 | -0.80 | 3.9 | 0.003 | 0.71 | 0.0 | 0.03 | 16.08 | 0.00 | 2.061 | 8.55 | 1.01 | 6.2 | 93.8 | 0.0 | -1.13 | 1.35 | 0.28 | 0.06 | -0.23 | 1992 | 131 | 1 | 0 | 0 | 0 | 997 | logfile |
✔ | 7N8N | 24238 | 2023-12-09 | 2021-06-15 | 3.89 | 5.26 | — | 4.4 | 0.006 | 0.85 | 0.0 | 0.04 | 27.93 | 0.01 | 2.035 | 27.61 | 0.00 | 9.6 | 90.4 | 0.0 | -1.71 | 0.87 | 0.78 | -0.56 | 4.4 | 0.005 | 0.75 | 0.0 | 0.04 | 28.79 | 0.01 | 2.129 | 24.94 | 0.00 | 7.7 | 92.0 | 0.3 | -1.10 | 0.76 | 0.88 | 0.80 | -0.33 | 11121 | 798 | 6 | 250 | 0 | 0 | 0 | logfile |
✔ | 7KU5 | 23034 | 2023-12-07 | 2020-11-24 | 3.76 | 3.63 | — | 3.9 | 0.006 | 1.29 | 0.0 | 0.07 | 14.85 | 0.01 | 2.420 | 3.63 | 0.00 | 12.8 | 87.2 | 0.0 | -5.41 | 0.23 | 0.65 | -0.48 | 3.9 | 0.002 | 0.72 | 0.0 | 0.04 | 15.66 | 0.01 | 2.252 | 10.89 | 0.00 | 9.3 | 90.7 | 0.0 | -1.34 | 1.18 | 0.24 | 0.69 | 2.46 | 750 | 88 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 8EFP | 28087 | 2023-12-07 | 2022-09-08 | 3.8 | 4.73 | 3.90 | 4.0 | 0.006 | 1.46 | 7.0 | 0.09 | 18.61 | 0.01 | 1.908 | 33.65 | 3.07 | 13.3 | 86.7 | 0.0 | -4.26 | 0.82 | 0.62 | -0.42 | 4.0 | 0.003 | 0.86 | 0.0 | 0.04 | 18.75 | 0.00 | 2.083 | 23.79 | 0.38 | 9.6 | 90.4 | 0.0 | -2.53 | 0.88 | 0.84 | 0.73 | -0.29 | 4705 | 594 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DWi | 27755 | 2023-12-07 | 2022-08-01 | 3.4 | 4.06 | 3.58 | 4.1 | 0.003 | 0.63 | 0.0 | 0.04 | 13.02 | 0.01 | 2.258 | 7.44 | 0.00 | 5.0 | 95.0 | 0.0 | 0.29 | 0.28 | 0.33 | -0.40 | 4.0 | 0.003 | 0.74 | 0.0 | 0.04 | 16.17 | 0.01 | 2.113 | 11.24 | 0.64 | 5.0 | 95.0 | 0.0 | -0.32 | 1.76 | 0.49 | 0.73 | 1.52 | 3192 | 424 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TMC | 25995 | 2023-12-07 | 2022-01-19 | 3.25 | 3.24 | 2.95 | 4.2 | 0.005 | 0.72 | 0.0 | 0.07 | 18.02 | 0.01 | 2.152 | 13.78 | 0.00 | 9.5 | 90.5 | 0.0 | -4.08 | 0.21 | 0.31 | -0.39 | 3.5 | 0.004 | 0.86 | 0.0 | 0.07 | 15.93 | 0.01 | 2.160 | 18.47 | 0.26 | 11.5 | 88.5 | 0.0 | -4.08 | 1.96 | 0.35 | 0.75 | 2.88 | 3426 | 405 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 8iDC | 35363 | 2023-12-09 | 2023-02-12 | 3.9 | 5.12 | 3.90 | 3.9 | 0.004 | 1.02 | 0.0 | 0.05 | 10.68 | 0.01 | 2.221 | 5.95 | 0.00 | 6.9 | 92.9 | 0.2 | -3.33 | 0.77 | 0.83 | -0.28 | 3.9 | 0.003 | 0.73 | 0.0 | 0.04 | 12.00 | 0.00 | 2.101 | 15.09 | 0.11 | 5.8 | 94.1 | 0.1 | -1.20 | 0.37 | 0.76 | 0.83 | 0.81 | 9701 | 1342 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8A1R | 15084 | 2023-12-08 | 2022-06-01 | 3.6 | 5.63 | 3.62 | 3.4 | 0.011 | 0.86 | 0.0 | 0.06 | 16.56 | 0.00 | 2.097 | 11.72 | 0.00 | 5.2 | 94.8 | 0.0 | -0.06 | 0.91 | 0.75 | -0.28 | 3.5 | 0.003 | 0.70 | 1.0 | 0.05 | 16.27 | 0.00 | 2.166 | 19.65 | 0.10 | 6.8 | 93.2 | 0.0 | -0.39 | 0.62 | 0.95 | 0.86 | -0.05 | 9286 | 1186 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7FG3 | 31577 | 2023-12-08 | 2021-07-25 | 3.9 | 3.62 | — | 4.0 | 0.006 | 1.13 | 0.0 | 0.06 | 14.47 | 0.01 | 1.929 | 37.29 | 0.00 | 18.5 | 80.8 | 0.7 | -4.60 | 0.22 | 0.47 | -0.27 | 4.0 | 0.004 | 0.92 | 0.0 | 0.05 | 16.64 | 0.01 | 2.088 | 24.71 | 0.10 | 15.3 | 84.1 | 0.5 | -3.68 | 0.78 | 0.23 | 0.45 | 0.35 | 9054 | 1166 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CTG | 26989 | 2023-12-07 | 2022-05-14 | 3.8 | 3.16 | 3.72 | 3.3 | 0.004 | 0.98 | 0.0 | 0.05 | 7.62 | 0.01 | 2.113 | 12.33 | 6.90 | 9.7 | 88.5 | 1.8 | -3.04 | 0.57 | 0.35 | -0.17 | 2.3 | 0.004 | 0.91 | 0.0 | 0.04 | 7.56 | 0.00 | 2.231 | 7.59 | 1.15 | 15.0 | 84.8 | 0.2 | -3.09 | 2.07 | 0.60 | 0.45 | 1.92 | 5100 | 1006 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 6CU8 | 7619 | 2023-12-07 | 2018-03-23 | 3.6 | 3.65 | — | 4.2 | 0.004 | 0.73 | 0.0 | 0.06 | 7.75 | 0.00 | 2.412 | 6.41 | 0.00 | 5.1 | 94.9 | 0.0 | -2.86 | 0.45 | 0.73 | -0.16 | 4.2 | 0.003 | 0.71 | 0.0 | 0.05 | 13.21 | 0.00 | 2.161 | 12.65 | 0.65 | 10.0 | 90.0 | 0.0 | -3.04 | 1.78 | 0.42 | 0.72 | 2.87 | 2880 | 410 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VZF | 32227 | 2023-12-07 | 2021-11-16 | 2.95 | 2.71 | — | 3.0 | 0.009 | 1.06 | 0.0 | 0.06 | 16.23 | 0.01 | 1.971 | 38.45 | 0.00 | 26.5 | 73.5 | 0.0 | -5.56 | 0.30 | 0.43 | -0.13 | 2.8 | 0.005 | 0.93 | 0.0 | 0.05 | 18.70 | 0.00 | 2.192 | 14.23 | 5.32 | 20.2 | 79.8 | 0.0 | -4.30 | 1.92 | 0.37 | 0.63 | -0.01 | 2628 | 363 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8E55 | 27903 | 2023-12-09 | 2022-08-19 | 3.85 | 4.07 | 3.34 | 4.0 | 0.007 | 0.67 | 0.0 | 0.03 | 12.36 | 0.00 | 2.252 | 3.39 | 0.50 | 2.5 | 97.5 | 0.0 | 1.17 | 0.66 | 0.60 | -0.11 | 4.0 | 0.003 | 0.57 | 0.0 | 0.03 | 16.19 | 0.00 | 2.253 | 11.37 | 0.00 | 1.7 | 98.3 | 0.0 | 4.14 | 1.16 | 0.69 | 0.71 | -0.11 | 12176 | 780 | 4 | 0 | 0 | 0 | 6104 | logfile |
✔ | 8EDL | 28035 | 2023-12-07 | 2022-09-05 | 3.7 | 3.30 | 3.60 | 3.1 | 0.002 | 0.52 | 0.0 | 0.03 | 11.07 | 0.00 | 2.307 | 6.09 | 0.00 | 2.1 | 97.7 | 0.3 | 2.83 | 0.62 | 0.61 | -0.09 | 3.1 | 0.002 | 0.56 | 0.0 | 0.03 | 13.69 | 0.00 | 2.346 | 6.09 | 0.00 | 3.1 | 96.9 | 0.0 | 3.49 | 1.16 | 0.68 | 0.73 | 2.92 | 2470 | 395 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UHB | 26511 | 2023-12-07 | 2022-03-26 | 3.0 | 3.17 | 2.97 | 3.2 | 0.011 | 1.36 | 3.0 | 0.12 | 9.73 | 0.00 | 2.562 | 5.08 | 1.42 | 3.0 | 96.6 | 0.4 | -0.52 | 0.52 | 0.54 | -0.09 | 3.1 | 0.003 | 0.63 | 0.0 | 0.04 | 16.40 | 0.00 | 2.267 | 9.91 | 2.37 | 3.8 | 96.2 | 0.0 | 0.48 | 2.43 | 0.69 | 0.83 | 3.55 | 2141 | 270 | 3 | 0 | 3 | 0 | 0 | logfile |
✔ | 6SXA | 10337 | 2023-12-08 | 2019-09-25 | 3.6 | 5.82 | 4.21 | 4.6 | 0.010 | 1.37 | 5.0 | 0.09 | 15.20 | 0.01 | 2.245 | 15.25 | 3.18 | 10.9 | 88.9 | 0.2 | -4.66 | 0.83 | 0.67 | -0.05 | 4.6 | 0.003 | 0.83 | 0.0 | 0.04 | 15.04 | 0.00 | 2.240 | 11.90 | 0.00 | 6.0 | 93.9 | 0.1 | -0.30 | 1.73 | 0.91 | 0.85 | 0.41 | 7014 | 943 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NZM | 12665 | 2023-12-08 | 2021-03-24 | 3.96 | 6.56 | 4.22 | 4.2 | 0.007 | 1.12 | 0.0 | 0.06 | 14.32 | 0.01 | 1.774 | 11.10 | 0.00 | 3.8 | 96.2 | 0.0 | -1.56 | 0.77 | 0.51 | -0.04 | 4.3 | 0.004 | 0.78 | 0.0 | 0.04 | 15.11 | 0.00 | 1.961 | 21.82 | 0.52 | 3.3 | 96.7 | 0.0 | 0.19 | 1.50 | 0.95 | 0.86 | 0.23 | 9109 | 1157 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 5VZL | 8749 | 2023-12-10 | 2017-05-29 | 3.9 | 4.38 | — | 19.0 | 0.006 | 0.96 | 0.0 | 0.05 | 16.65 | 0.01 | 2.216 | 7.72 | 0.25 | 8.4 | 91.6 | 0.0 | -4.13 | 0.31 | 0.03 | -0.03 | 17.0 | 0.003 | 0.74 | 0.0 | 0.04 | 17.73 | 0.00 | 1.252 | 15.90 | 0.42 | 5.9 | 94.1 | 0.0 | -1.58 | 1.24 | 0.38 | 0.19 | 0.44 | 13915 | 1451 | 3 | 115 | 1 | 0 | 0 | logfile |
✔ | 8ERL | 28554 | 2023-12-08 | 2022-10-12 | 3.9 | 4.58 | 3.40 | 4.1 | 0.005 | 1.28 | 0.0 | 0.07 | 15.42 | 0.01 | 2.296 | 4.84 | 0.27 | 9.5 | 90.5 | 0.0 | -3.82 | 0.86 | 0.76 | -0.02 | 4.1 | 0.003 | 0.78 | 0.0 | 0.04 | 15.62 | 0.00 | 2.101 | 21.34 | 0.27 | 9.5 | 90.5 | 0.0 | -2.63 | 1.05 | 0.87 | 0.78 | -0.50 | 6600 | 830 | 2 | 0 | 0 | 0 | 0 | logfile |