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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7oTP | 13064 | 2023-11-20 | 2021-06-10 | 3.4 | 3.69 | — | 3.6 | 0.007 | 0.87 | 0.0 | 0.05 | 14.56 | 0.01 | 2.017 | 14.76 | 0.16 | 8.6 | 91.2 | 0.2 | -1.62 | 0.80 | 0.80 | 1.68 | 3.6 | 0.003 | 0.70 | 0.0 | 0.04 | 15.93 | 0.00 | 1.972 | 10.80 | 0.28 | 6.4 | 93.6 | 0.0 | -0.56 | 1.37 | 0.80 | 0.81 | 1.25 | 29039 | 3636 | 1 | 0 | 23 | 0 | 0 | logfile |
✘ | 6TAY | 10430 | 2023-11-21 | 2019-10-31 | 3.2 | 2.55 | — | 2.9 | 0.011 | 1.15 | 0.0 | 0.06 | 11.27 | 0.01 | 2.066 | 4.61 | 0.28 | 8.9 | 91.0 | 0.1 | -3.72 | 0.86 | 0.82 | 3.85 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35241 | 4350 | 1 | 0 | 71 | 0 | 0 | logfile |
✔ | 7oTY | 13069 | 2023-11-20 | 2021-06-10 | 2.96 | 3.20 | — | 3.1 | 0.013 | 1.08 | 1.0 | 0.06 | 14.42 | 0.01 | 1.177 | 19.52 | 0.75 | 10.1 | 89.7 | 0.2 | -2.22 | 0.75 | 0.78 | 1.93 | 3.2 | 0.003 | 0.71 | 0.0 | 0.04 | 16.53 | 0.00 | 2.173 | 11.20 | 1.28 | 6.9 | 93.0 | 0.0 | -0.31 | 0.50 | 0.76 | 0.79 | 1.47 | 29034 | 3636 | 1 | 0 | 21 | 0 | 0 | logfile |
✔ | 7oP1 | 13011 | 2023-11-14 | 2021-05-28 | 3.7 | 3.77 | — | 3.6 | 0.004 | 1.16 | 0.0 | 0.04 | 13.67 | 0.00 | 1.848 | 7.11 | 0.00 | 4.7 | 95.3 | 0.0 | -0.69 | 0.69 | 0.87 | 2.43 | 3.6 | 0.003 | 0.55 | 0.0 | 0.04 | 14.97 | 0.00 | 1.681 | 5.18 | 0.10 | 3.8 | 96.2 | 0.0 | 0.47 | 0.30 | 0.70 | 0.86 | 1.63 | 8744 | 1098 | 1 | 0 | 3 | 0 | 0 | logfile |
✔ | 8H8B | 34541 | 2023-11-14 | 2022-10-22 | 3.16 | 3.37 | 3.20 | 3.3 | 0.001 | 0.46 | 0.0 | 0.04 | 13.00 | 0.00 | 2.226 | 6.42 | 0.67 | 6.3 | 93.7 | 0.0 | -2.99 | 0.70 | 0.76 | 2.74 | 3.3 | 0.003 | 0.62 | 0.0 | 0.04 | 15.26 | 0.00 | 2.256 | 6.60 | 0.34 | 9.5 | 90.5 | 0.0 | -1.76 | 0.61 | 0.74 | 0.85 | 3.67 | 8344 | 1027 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oTM | 13062 | 2023-11-20 | 2021-06-10 | 3.33 | 3.97 | — | 3.7 | 0.008 | 0.93 | 1.0 | 0.05 | 14.51 | 0.01 | 2.071 | 16.56 | 0.28 | 9.2 | 90.6 | 0.2 | -1.79 | 0.82 | 0.77 | 1.32 | 3.7 | 0.003 | 0.70 | 0.0 | 0.04 | 15.94 | 0.00 | 2.146 | 11.32 | 0.16 | 6.4 | 93.6 | 0.0 | -0.53 | 1.41 | 0.84 | 0.80 | 0.80 | 29040 | 3636 | 1 | 0 | 21 | 0 | 0 | logfile |
✘ | 7FBS | 31519 | 2023-11-14 | 2021-07-12 | 3.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9274 | 1118 | 1 | 0 | 17 | 0 | 0 | logfile |
✔ | 7WXG | 32878 | 2023-11-13 | 2022-02-14 | 4.2 | 4.21 | 3.56 | 4.2 | 0.012 | 1.07 | 0.0 | 0.05 | 14.22 | 0.00 | 2.184 | 12.87 | 0.29 | 10.7 | 89.3 | 0.0 | -5.16 | 0.51 | 0.80 | — | 4.2 | 0.002 | 0.66 | 0.0 | 0.04 | 14.08 | 0.00 | 2.324 | 9.54 | 0.00 | 5.8 | 94.2 | 0.0 | -0.37 | 1.29 | 0.51 | 0.78 | — | 3295 | 430 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7V0X | 26952 | 2023-11-13 | 2022-05-11 | 3.0 | 2.83 | 2.92 | 2.9 | 0.002 | 0.63 | 0.0 | 0.04 | 19.06 | 0.01 | 2.211 | 6.52 | 5.05 | 4.0 | 96.0 | 0.0 | 0.72 | 0.61 | 0.88 | 3.78 | 2.9 | 0.002 | 0.53 | 0.0 | 0.04 | 19.08 | 0.00 | 2.176 | 7.23 | 4.38 | 4.9 | 95.1 | 0.0 | 1.77 | 0.47 | 0.60 | 0.88 | 3.17 | 2818 | 375 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N74 | 24219 | 2023-11-14 | 2021-06-09 | 2.8 | 3.52 | 2.84 | 3.3 | 0.006 | 0.89 | 0.0 | 0.10 | 12.93 | 0.01 | 1.844 | 7.52 | 0.00 | 2.2 | 97.8 | 0.0 | 0.74 | 0.75 | 0.84 | 3.27 | 3.3 | 0.002 | 0.57 | 0.0 | 0.04 | 14.64 | 0.00 | 2.167 | 4.93 | 2.06 | 1.9 | 98.1 | 0.0 | 2.39 | 0.54 | 0.68 | 0.82 | 2.46 | 7859 | 1036 | 1 | 0 | 4 | 3 | 0 | logfile |
✔ | 6XMS | 22262 | 2023-11-14 | 2020-06-30 | 3.4 | 4.03 | 3.50 | 3.8 | 0.006 | 1.18 | 0.0 | 0.04 | 12.68 | 0.00 | 1.862 | 6.08 | 0.00 | 4.6 | 95.4 | 0.0 | -2.39 | 0.74 | 0.87 | 2.45 | 3.8 | 0.004 | 0.60 | 0.0 | 0.04 | 14.23 | 0.00 | 1.797 | 5.19 | 0.11 | 4.7 | 95.3 | 0.0 | 0.03 | 0.36 | 0.74 | 0.89 | 1.89 | 8389 | 1091 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7P03 | 13142 | 2023-11-18 | 2021-06-29 | 3.45 | 3.78 | — | 3.7 | 0.006 | 0.68 | 0.0 | 0.04 | 13.86 | 0.00 | 1.801 | 6.52 | 0.00 | 5.4 | 94.6 | 0.0 | -0.70 | 0.62 | 0.71 | 1.37 | 3.7 | 0.004 | 0.57 | 0.0 | 0.04 | 15.79 | 0.00 | 1.838 | 7.61 | 0.17 | 4.4 | 95.6 | 0.0 | 0.48 | 0.89 | 0.64 | 0.78 | 1.93 | 21149 | 1333 | 1 | 0 | 0 | 0 | 10498 | logfile |
✔ | 7XGR | 33187 | 2023-11-13 | 2022-04-06 | 2.6 | 3.38 | 2.47 | 3.2 | 0.004 | 0.71 | 0.0 | 0.04 | 18.88 | 0.00 | 2.259 | 8.70 | 2.17 | 6.3 | 93.7 | 0.0 | -0.28 | 0.52 | 0.75 | 2.35 | 3.2 | 0.002 | 0.61 | 0.0 | 0.03 | 19.07 | 0.00 | 2.203 | 7.19 | 1.96 | 5.8 | 94.2 | 0.0 | 2.24 | 1.25 | 0.55 | 0.83 | 2.09 | 4340 | 546 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oTV | 13067 | 2023-11-20 | 2021-06-10 | 3.24 | 3.53 | — | 3.4 | 0.012 | 0.79 | 0.0 | 0.10 | 14.61 | 0.01 | 2.090 | 10.98 | 0.34 | 8.5 | 91.4 | 0.1 | -1.18 | 0.71 | 0.65 | 0.82 | 3.4 | 0.003 | 0.73 | 0.0 | 0.04 | 16.70 | 0.00 | 2.146 | 10.78 | 0.25 | 5.8 | 94.1 | 0.1 | -0.43 | 0.90 | 0.77 | 0.77 | 0.88 | 29041 | 3636 | 1 | 0 | 21 | 0 | 0 | logfile |
✔ | 7N70 | 24214 | 2023-11-14 | 2021-06-09 | 2.8 | 3.43 | 2.92 | 3.3 | 0.005 | 0.73 | 0.0 | 0.05 | 13.21 | 0.01 | 2.109 | 7.93 | 0.00 | 1.6 | 98.4 | 0.0 | 0.27 | 0.74 | 0.85 | 2.88 | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 15.15 | 0.00 | 1.920 | 7.56 | 1.15 | 1.5 | 98.5 | 0.0 | 1.67 | 0.46 | 0.63 | 0.78 | 2.06 | 7953 | 1032 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7JGD | 22323 | 2023-11-17 | 2020-07-19 | 3.38 | 3.68 | — | 3.6 | 0.002 | 0.43 | 0.0 | 0.05 | 12.94 | 0.00 | 2.123 | 11.45 | 0.00 | 3.9 | 96.1 | 0.0 | 1.18 | 0.61 | 0.66 | 2.22 | 3.6 | 0.003 | 0.53 | 0.0 | 0.05 | 14.82 | 0.00 | 2.054 | 14.21 | 0.08 | 7.3 | 92.7 | 0.0 | 0.43 | 0.52 | 0.63 | 0.71 | 1.77 | 20292 | 1435 | 1 | 0 | 0 | 0 | 8505 | logfile |
✘ | 7PQ5 | 13587 | 2023-11-14 | 2021-09-16 | 3.17 | 3.58 | 3.09 | 3.4 | 0.005 | 0.85 | 0.0 | 0.05 | 15.55 | 0.01 | 2.255 | 3.50 | 2.82 | 4.5 | 95.3 | 0.2 | -0.13 | 0.85 | 0.87 | 5.15 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8512 | 1047 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N78 | 24223 | 2023-11-14 | 2021-06-09 | 3.0 | 3.81 | 3.01 | 3.5 | 0.010 | 0.96 | 0.0 | 0.06 | 12.83 | 0.01 | 1.930 | 8.14 | 0.00 | 2.6 | 97.4 | 0.0 | -1.34 | 0.71 | 0.83 | 3.03 | 3.5 | 0.003 | 0.61 | 0.0 | 0.04 | 13.79 | 0.00 | 2.008 | 6.24 | 1.09 | 1.9 | 98.1 | 0.0 | 2.24 | 0.43 | 0.64 | 0.76 | 1.67 | 7669 | 1030 | 1 | 0 | 11 | 3 | 0 | logfile |
✔ | 7N5F | 24188 | 2023-11-13 | 2021-06-05 | 2.7 | 2.27 | 2.74 | 2.0 | 0.023 | 1.50 | 0.0 | 0.10 | 9.99 | 0.01 | 2.468 | 0.16 | 0.00 | 1.3 | 98.7 | 0.0 | 1.68 | 0.36 | 0.75 | 3.32 | 1.7 | 0.003 | 0.57 | 0.0 | 0.04 | 17.55 | 0.00 | 2.307 | 7.74 | 1.59 | 1.6 | 98.4 | 0.0 | 2.51 | 0.79 | 0.36 | 0.78 | 3.13 | 3037 | 386 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7XD3 | 33134 | 2023-11-14 | 2022-03-26 | 4.05 | 4.16 | — | 3.8 | 0.003 | 0.62 | 0.0 | 0.04 | 16.04 | 0.00 | 1.960 | 1.21 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.85 | 0.74 | — | 3.9 | 0.007 | 0.80 | 0.0 | 0.04 | 17.33 | 0.01 | 1.680 | 17.06 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.79 | 0.87 | 0.82 | — | 9062 | 0 | 1 | 423 | 28 | 0 | 0 | logfile |