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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7RRA | 24657 | 2023-11-14 | 2021-08-09 | 4.4 | 4.79 | — | 3.5 | 0.003 | 0.59 | 0.0 | 0.04 | 13.75 | 0.00 | 2.261 | 9.42 | 0.00 | 3.0 | 97.0 | 0.0 | 1.98 | 0.62 | 0.57 | — | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 13.95 | 0.00 | 2.142 | 14.85 | 0.00 | 4.1 | 95.9 | 0.0 | 1.58 | 1.89 | 0.65 | 0.62 | — | 9608 | 1204 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JTK | 22475 | 2023-11-18 | 2020-08-17 | 3.2 | 3.51 | — | 3.2 | 0.005 | 0.75 | 2.0 | 0.05 | 13.43 | 0.00 | 1.951 | 9.29 | 0.51 | 3.2 | 96.8 | 0.0 | -0.30 | 0.80 | 0.74 | 2.43 | 3.2 | 0.003 | 0.57 | 0.0 | 0.04 | 15.07 | 0.00 | 2.124 | 8.03 | 0.20 | 3.3 | 96.7 | 0.0 | 0.61 | 0.36 | 0.88 | 0.85 | 2.08 | 72807 | 9482 | 43 | 0 | 38 | 0 | 0 | logfile |
✔ | 6DBo | 7846 | 2023-11-16 | 2018-05-03 | 4.4 | 4.68 | — | 4.4 | 0.009 | 1.35 | 0.0 | 0.07 | 22.20 | 0.01 | 1.874 | 25.40 | 0.00 | 6.8 | 92.4 | 0.7 | -4.15 | 0.86 | 0.82 | — | 4.4 | 0.004 | 0.79 | 0.0 | 0.04 | 19.79 | 0.00 | 2.027 | 22.33 | 0.06 | 5.5 | 94.5 | 0.0 | -1.20 | 1.57 | 0.87 | 0.84 | — | 16820 | 1786 | 10 | 128 | 6 | 0 | 0 | logfile |
✘ | 7E0J | 30934 | 2023-11-14 | 2021-01-28 | 3.13 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8140 | 672 | 6 | 0 | 56 | 0 | 0 | logfile |
✘ | 8EAJ | 27978 | 2023-11-20 | 2022-08-29 | 2.45 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 28500 | 3534 | 18 | 11 | 16 | 15 | 0 | logfile |
✔ | 7XLT | 33286 | 2023-11-13 | 2022-04-22 | 4.4 | 4.55 | 4.45 | 4.3 | 0.004 | 0.89 | 0.0 | 0.05 | 16.27 | 0.01 | 2.288 | 8.02 | 0.79 | 6.8 | 93.2 | 0.0 | -2.19 | 0.68 | 0.59 | — | 4.3 | 0.005 | 0.81 | 0.0 | 0.04 | 14.19 | 0.01 | 2.037 | 32.09 | 0.00 | 10.8 | 89.2 | 0.0 | -2.87 | 1.77 | 0.75 | 0.73 | — | 4985 | 431 | 4 | 80 | 0 | 0 | 0 | logfile |
✔ | 6KFG | 9972 | 2023-11-18 | 2019-07-07 | 3.8 | 3.91 | — | 3.9 | 0.007 | 0.77 | 0.0 | 0.05 | 14.04 | 0.00 | 2.148 | 13.10 | 0.67 | 11.5 | 88.5 | 0.0 | -4.38 | 0.63 | 0.82 | 1.64 | 3.9 | 0.005 | 0.78 | 0.0 | 0.04 | 16.41 | 0.00 | 2.166 | 13.65 | 1.09 | 8.9 | 91.1 | 0.0 | -0.56 | 1.36 | 0.63 | 0.82 | 1.37 | 22264 | 2704 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LX5 | 23566 | 2023-11-13 | 2021-03-03 | 3.44 | 3.85 | 3.41 | 3.9 | 0.005 | 0.62 | 0.0 | 0.04 | 10.10 | 0.00 | 2.198 | 4.72 | 0.00 | 3.4 | 96.6 | 0.0 | -0.46 | 0.71 | 0.81 | 3.26 | 3.9 | 0.003 | 0.74 | 0.0 | 0.04 | 15.48 | 0.00 | 2.191 | 10.91 | 1.08 | 2.9 | 97.1 | 0.0 | -0.18 | 1.43 | 0.70 | 0.81 | 3.17 | 3485 | 448 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6M5V | 30094 | 2023-11-15 | 2020-03-11 | 4.5 | 4.75 | — | 4.6 | 0.007 | 0.86 | 1.0 | 0.05 | 16.07 | 0.00 | 2.209 | 18.28 | 5.50 | 9.0 | 90.9 | 0.2 | -3.04 | 0.56 | 0.57 | — | 4.6 | 0.003 | 0.77 | 0.0 | 0.04 | 13.66 | 0.00 | 2.149 | 20.95 | 0.00 | 8.3 | 91.7 | 0.0 | -0.40 | 2.40 | 0.63 | 0.74 | — | 10549 | 1359 | 5 | 0 | 5 | 0 | 0 | logfile |
✔ | 7XJK | 33230 | 2023-11-14 | 2022-04-18 | 3.3 | 3.56 | 3.42 | 3.5 | 0.005 | 0.65 | 0.0 | 0.04 | 13.52 | 0.01 | 2.172 | 11.97 | 0.00 | 2.7 | 97.3 | 0.0 | 0.32 | 0.64 | 0.77 | 2.84 | 3.6 | 0.003 | 0.58 | 0.0 | 0.04 | 15.69 | 0.00 | 2.163 | 10.24 | 0.34 | 3.0 | 97.0 | 0.0 | 0.89 | 0.35 | 0.64 | 0.79 | 2.31 | 8570 | 1139 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MTD | 23983 | 2023-11-17 | 2021-05-13 | 3.5 | 2.75 | 3.50 | 3.5 | 0.007 | 0.89 | 0.0 | 0.06 | 9.53 | 0.01 | 2.308 | 2.25 | 0.15 | 6.5 | 93.5 | 0.0 | -4.05 | 0.71 | 0.81 | 2.91 | 3.4 | 0.003 | 0.62 | 0.0 | 0.04 | 14.06 | 0.00 | 2.203 | 5.04 | 0.10 | 4.6 | 95.3 | 0.1 | -0.64 | 1.12 | 0.72 | 0.81 | 2.52 | 18833 | 2348 | 20 | 0 | 41 | 0 | 0 | logfile |
✔ | 7X2D | 32965 | 2023-11-15 | 2022-02-25 | 3.3 | 3.43 | — | 3.5 | 0.005 | 0.84 | 1.0 | 0.05 | 14.43 | 0.01 | 1.860 | 12.03 | 0.57 | 3.0 | 97.0 | 0.0 | -0.46 | 0.64 | 0.79 | 2.37 | 3.5 | 0.002 | 0.57 | 0.0 | 0.04 | 16.00 | 0.00 | 2.106 | 9.39 | 0.45 | 2.0 | 98.0 | 0.0 | 1.17 | 1.18 | 0.63 | 0.82 | 2.16 | 8203 | 1032 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 7P16 | 13157 | 2023-11-13 | 2021-07-01 | 4.3 | 4.40 | 3.53 | 4.3 | 0.004 | 0.73 | 0.0 | 0.04 | 15.07 | 0.00 | 2.178 | 7.56 | 0.00 | 2.5 | 97.5 | 0.0 | -0.08 | 0.65 | 0.77 | — | 4.3 | 0.003 | 0.67 | 0.0 | 0.04 | 14.47 | 0.00 | 2.185 | 11.13 | 0.00 | 3.7 | 96.3 | 0.0 | 0.83 | 1.45 | 0.64 | 0.76 | — | 3621 | 444 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 8AYN | 15717 | 2023-11-16 | 2022-09-02 | 2.8 | 2.38 | 2.63 | 2.8 | 0.013 | 1.23 | 0.0 | 0.05 | 15.14 | 0.00 | 2.003 | 5.50 | 0.00 | 3.9 | 96.1 | 0.0 | 0.76 | 0.68 | 0.80 | 3.90 | 2.8 | 0.006 | 0.64 | 0.0 | 0.04 | 16.36 | 0.00 | 2.151 | 6.65 | 1.91 | 2.8 | 97.2 | 0.0 | 0.58 | 1.17 | 0.64 | 0.81 | 3.62 | 15748 | 1998 | 12 | 0 | 28 | 0 | 0 | logfile |
✔ | 8AA2 | 15291 | 2023-11-22 | 2022-06-29 | 3.1 | 3.39 | 2.97 | 3.2 | 0.012 | 0.60 | 0.0 | 0.09 | 13.22 | 0.00 | 1.958 | 7.56 | 0.00 | 3.3 | 96.6 | 0.1 | 0.59 | 0.84 | 0.86 | 3.61 | 3.2 | 0.003 | 0.54 | 0.0 | 0.04 | 14.48 | 0.00 | 1.885 | 7.11 | 0.19 | 3.3 | 96.7 | 0.1 | -0.19 | 1.56 | 0.85 | 0.90 | 3.88 | 35942 | 4472 | 19 | 0 | 49 | 0 | 0 | logfile |
✘ | 7D5i | 30582 | 2023-11-13 | 2020-09-26 | 2.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6232 | 793 | 3 | 0 | 3 | 0 | 0 | logfile |
✔ | 7A4N | 11639 | 2023-11-18 | 2020-08-20 | 2.75 | 2.48 | — | 2.7 | 0.007 | 0.81 | 1.0 | 0.10 | 12.87 | 0.00 | 2.003 | 5.21 | 0.20 | 3.9 | 96.1 | 0.0 | -2.00 | 0.77 | 0.81 | 3.64 | 2.6 | 0.005 | 0.63 | 0.0 | 0.05 | 14.98 | 0.00 | 2.072 | 6.95 | 1.51 | 4.1 | 95.9 | 0.0 | -0.51 | 0.55 | 0.78 | 0.87 | 3.32 | 22809 | 2889 | 9 | 0 | 21 | 0 | 0 | logfile |
✔ | 7RAZ | 24390 | 2023-11-15 | 2021-07-05 | 3.4 | 4.46 | 3.18 | 3.9 | 0.004 | 0.87 | 0.0 | 0.04 | 13.50 | 0.00 | 2.201 | 11.69 | 0.00 | 2.3 | 97.7 | 0.0 | 1.13 | 0.79 | 0.85 | 2.19 | 3.9 | 0.004 | 0.72 | 0.0 | 0.04 | 14.04 | 0.00 | 2.113 | 14.03 | 0.45 | 2.5 | 97.5 | 0.0 | 1.10 | 0.40 | 0.79 | 0.87 | 2.20 | 10472 | 1330 | 14 | 0 | 7 | 0 | 0 | logfile |
✔ | 7F4i | 31453 | 2023-11-14 | 2021-06-18 | 3.1 | 3.87 | — | 3.5 | 0.009 | 1.21 | 0.0 | 0.06 | 11.96 | 0.01 | 2.169 | 1.75 | 0.00 | 4.3 | 95.7 | 0.0 | -0.38 | 0.67 | 0.82 | 3.32 | 3.5 | 0.004 | 0.71 | 0.0 | 0.04 | 14.94 | 0.00 | 2.222 | 10.12 | 0.47 | 2.2 | 97.8 | 0.0 | 1.37 | 2.50 | 0.66 | 0.83 | 2.24 | 8031 | 1030 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 7RPo | 24618 | 2023-11-15 | 2021-08-03 | 4.16 | 2.77 | — | 1.8 | 0.003 | 0.50 | 0.0 | 0.04 | 16.86 | 0.00 | 1.759 | 6.97 | 1.64 | 8.5 | 91.5 | 0.0 | -2.01 | 0.74 | 0.71 | — | 2.1 | 0.003 | 0.71 | 0.0 | 0.04 | 18.43 | 0.00 | 2.035 | 12.22 | 0.10 | 8.8 | 91.2 | 0.0 | -2.24 | 1.72 | 0.75 | 0.71 | — | 10602 | 1179 | 9 | 62 | 5 | 0 | 0 | logfile |