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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6ZLG | 11265 | 2022-04-08 | 2020-06-30 | 3.0 | 3.18 | — | 3.1 | 0.003 | 0.44 | 0.0 | 0.03 | 16.50 | 0.00 | 2.180 | 7.60 | 4.15 | 0.1 | 99.9 | 0.0 | 1.26 | 0.80 | 0.87 | 2.98 | 3.1 | 0.003 | 0.39 | 0.0 | 0.03 | 17.79 | 0.00 | 2.131 | 6.39 | 3.02 | 1.5 | 98.5 | 0.0 | 5.23 | 1.17 | 0.81 | 0.89 | 2.69 | 33008 | 4072 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MGM | 23829 | 2022-04-07 | 2021-04-12 | 3.1 | 3.35 | 3.11 | 3.0 | 0.004 | 0.55 | 0.0 | 0.04 | 14.02 | 0.00 | 1.874 | 5.80 | 0.04 | 2.4 | 97.6 | 0.0 | 0.78 | 0.87 | 0.89 | 2.62 | 3.0 | 0.002 | 0.43 | 0.0 | 0.04 | 14.90 | 0.00 | 1.981 | 5.68 | 0.07 | 1.8 | 98.2 | 0.0 | 1.66 | 0.21 | 0.87 | 0.90 | 2.25 | 24079 | 2964 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 6ZNH | 11311 | 2022-04-05 | 2020-07-06 | 3.6 | 3.61 | 3.56 | 3.6 | 0.006 | 0.84 | 0.0 | 0.04 | 13.44 | 0.00 | 2.160 | 4.03 | 3.03 | 2.6 | 97.4 | 0.0 | 0.52 | 0.57 | 0.83 | 1.42 | 3.6 | 0.002 | 0.44 | 0.0 | 0.03 | 15.61 | 0.00 | 2.229 | 4.24 | 0.20 | 1.4 | 98.6 | 0.0 | 4.86 | 1.15 | 0.57 | 0.82 | 1.34 | 14191 | 1817 | 23 | 0 | 0 | 0 | 0 | logfile |
✔ | 6QPi | 4614 | 2022-04-04 | 2019-02-14 | 3.3 | 3.37 | 2.73 | 3.4 | 0.005 | 0.70 | 0.0 | 0.04 | 6.59 | 0.01 | 2.432 | 2.09 | 0.00 | 1.4 | 98.6 | 0.0 | -3.02 | 0.39 | 0.62 | — | 3.3 | 0.002 | 0.44 | 0.0 | 0.04 | 4.28 | 0.00 | 2.462 | 1.49 | 0.00 | 2.8 | 97.2 | 0.0 | 2.25 | 1.20 | 0.41 | 0.62 | — | 2288 | 462 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PXE | 13700 | 2022-04-07 | 2021-10-08 | 2.38 | 2.90 | 2.41 | 2.7 | 0.005 | 0.73 | 0.0 | 0.04 | 16.55 | 0.00 | 2.151 | 5.31 | 1.94 | 1.0 | 99.0 | 0.0 | 1.17 | 0.79 | 0.87 | 3.74 | 2.7 | 0.002 | 0.44 | 0.0 | 0.04 | 16.04 | 0.00 | 2.159 | 5.05 | 2.20 | 1.2 | 98.8 | 0.0 | 1.73 | 0.33 | 0.79 | 0.89 | 4.24 | 28928 | 3540 | 12 | 0 | 36 | 136 | 0 | logfile |
✔ | 6PXM | 20521 | 2022-04-08 | 2019-07-26 | 2.1 | 2.33 | 2.32 | 2.4 | 0.008 | 0.71 | 0.0 | 0.04 | 16.03 | 0.00 | 2.392 | 1.60 | 0.00 | 0.6 | 99.4 | 0.0 | -3.44 | 0.79 | 0.89 | 5.35 | 2.3 | 0.002 | 0.44 | 0.0 | 0.03 | 17.75 | 0.00 | 2.211 | 4.41 | 0.14 | 1.8 | 98.2 | 0.0 | 5.26 | 1.48 | 0.79 | 0.90 | 3.80 | 32736 | 4080 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SFJ | 25079 | 2022-04-04 | 2021-10-04 | 2.74 | 3.33 | — | 3.4 | 0.007 | 0.97 | 0.0 | 0.04 | 18.56 | 0.01 | 2.308 | 3.87 | 1.28 | 2.5 | 97.5 | 0.0 | 2.20 | 0.62 | 0.78 | 3.51 | 3.4 | 0.002 | 0.45 | 0.0 | 0.04 | 17.44 | 0.00 | 2.219 | 5.02 | 0.85 | 3.2 | 96.8 | 0.0 | 2.48 | 0.47 | 0.57 | 0.77 | 3.02 | 7377 | 852 | 9 | 0 | 24 | 3 | 0 | logfile |
✔ | 7ooA | 13008 | 2022-04-05 | 2021-05-27 | 2.7 | 2.63 | 2.63 | 2.6 | 0.006 | 0.73 | 0.0 | 0.05 | 15.29 | 0.00 | 2.256 | 5.81 | 0.00 | 0.4 | 99.6 | 0.0 | 2.71 | 0.71 | 0.86 | 4.30 | 2.6 | 0.002 | 0.45 | 0.0 | 0.04 | 16.94 | 0.00 | 2.220 | 5.75 | 1.15 | 1.3 | 98.7 | 0.0 | 1.77 | 1.12 | 0.71 | 0.87 | 3.94 | 15610 | 1834 | 14 | 0 | 35 | 0 | 0 | logfile |
✔ | 7MQH | 23947 | 2022-04-07 | 2021-05-05 | 3.1 | 3.00 | 3.04 | 3.2 | 0.007 | 0.81 | 0.0 | 0.06 | 12.35 | 0.00 | 2.350 | 2.29 | 0.00 | 1.0 | 99.0 | 0.0 | 0.95 | 0.79 | 0.86 | 5.69 | 3.2 | 0.002 | 0.45 | 0.0 | 0.04 | 13.57 | 0.00 | 2.290 | 4.18 | 0.66 | 1.9 | 98.1 | 0.0 | 1.09 | 0.37 | 0.82 | 0.88 | 5.19 | 12736 | 1640 | 16 | 16 | 0 | 0 | 0 | logfile |
✔ | 7LGU | 23329 | 2022-04-05 | 2021-01-21 | 2.3 | 2.77 | — | 2.7 | 0.003 | 0.93 | 0.0 | 0.04 | 14.18 | 0.00 | 2.197 | 8.08 | 1.15 | 1.6 | 98.4 | 0.0 | 1.41 | 0.64 | 0.84 | 5.76 | 2.7 | 0.002 | 0.45 | 0.0 | 0.04 | 14.54 | 0.00 | 2.136 | 5.06 | 0.71 | 1.8 | 98.2 | 0.0 | 1.55 | 0.22 | 0.64 | 0.85 | 5.47 | 11597 | 1360 | 6 | 0 | 110 | 111 | 0 | logfile |
✔ | 7K0N | 22604 | 2022-04-06 | 2020-09-04 | 3.1 | 3.55 | — | 3.5 | 0.004 | 0.69 | 0.0 | 0.04 | 13.94 | 0.00 | 2.227 | 6.22 | 0.32 | 2.5 | 97.5 | 0.0 | 0.72 | 0.73 | 0.82 | 2.88 | 3.5 | 0.002 | 0.46 | 0.0 | 0.04 | 15.15 | 0.00 | 2.254 | 5.63 | 0.05 | 1.9 | 98.1 | 0.0 | 1.24 | 0.34 | 0.73 | 0.83 | 2.55 | 18470 | 2340 | 14 | 0 | 18 | 0 | 0 | logfile |
✔ | 6MRT | 9212 | 2022-04-04 | 2018-10-15 | 2.8 | 2.93 | — | 2.9 | 0.008 | 0.90 | 0.0 | 0.05 | 10.67 | 0.01 | 2.260 | 1.61 | 0.82 | 1.1 | 98.9 | 0.0 | -1.27 | 0.70 | 0.84 | 3.77 | 2.9 | 0.003 | 0.46 | 0.0 | 0.03 | 15.43 | 0.00 | 2.226 | 3.14 | 1.29 | 0.5 | 99.5 | 0.0 | 5.71 | 3.08 | 0.73 | 0.87 | 2.07 | 26868 | 3420 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7S6D | 24875 | 2022-04-05 | 2021-09-13 | 3.1 | 3.82 | — | 3.4 | 0.005 | 0.71 | 0.0 | 0.04 | 13.49 | 0.00 | 2.083 | 3.29 | 0.00 | 3.4 | 96.6 | 0.0 | -0.10 | 0.86 | 0.81 | 3.05 | 3.4 | 0.002 | 0.46 | 0.0 | 0.04 | 14.12 | 0.00 | 2.020 | 5.54 | 0.00 | 3.4 | 96.6 | 0.0 | 0.42 | 1.12 | 0.86 | 0.83 | 2.96 | 46193 | 3112 | 8 | 0 | 1 | 0 | 22846 | logfile |
✔ | 7oo6 | 13006 | 2022-04-05 | 2021-05-26 | 3.1 | 2.92 | 2.88 | 3.0 | 0.005 | 0.63 | 0.0 | 0.05 | 10.97 | 0.00 | 2.327 | 9.05 | 0.00 | 1.5 | 98.5 | 0.0 | 2.48 | 0.63 | 0.80 | 2.67 | 3.0 | 0.003 | 0.46 | 0.0 | 0.04 | 13.94 | 0.00 | 2.358 | 7.46 | 0.20 | 1.3 | 98.7 | 0.0 | 2.23 | 1.13 | 0.65 | 0.83 | 2.25 | 14546 | 1827 | 14 | 0 | 14 | 0 | 0 | logfile |
✔ | 7JM9 | 22390 | 2022-04-09 | 2020-07-31 | 2.5 | 2.71 | 2.65 | 2.7 | 0.009 | 1.47 | 0.0 | 0.07 | 13.53 | 0.00 | 2.291 | 3.08 | 0.56 | 1.1 | 98.9 | 0.0 | 0.10 | 0.62 | 0.82 | 5.25 | 2.7 | 0.002 | 0.46 | 0.0 | 0.04 | 13.55 | 0.00 | 2.085 | 6.32 | 1.27 | 1.4 | 98.6 | 0.0 | 3.63 | 0.72 | 0.64 | 0.85 | 4.54 | 41136 | 2328 | 36 | 0 | 168 | 156 | 18876 | logfile |
✔ | 7JGG | 22326 | 2022-04-04 | 2020-07-19 | 4.88 | 8.00 | — | 7.7 | 0.002 | 0.46 | 0.0 | 0.03 | 13.22 | 0.00 | 1.988 | 54.13 | 0.00 | 3.3 | 96.5 | 0.2 | 1.67 | 0.66 | 0.64 | — | 7.5 | 0.002 | 0.46 | 0.0 | 0.03 | 12.61 | 0.00 | 1.976 | 80.22 | 0.00 | 4.5 | 95.5 | 0.0 | 1.72 | 1.70 | 0.67 | 0.69 | — | 4210 | 506 | 1 | 0 | 0 | 0 | 28 | logfile |
✔ | 6U6i | 20666 | 2022-04-08 | 2019-08-29 | 3.12 | 3.43 | — | 3.4 | 0.006 | 0.45 | 0.0 | 0.07 | 11.24 | 0.00 | 2.029 | 6.07 | 0.00 | 7.6 | 92.4 | 0.0 | -3.59 | 0.80 | 0.80 | 4.39 | 3.3 | 0.002 | 0.46 | 0.0 | 0.04 | 12.86 | 0.00 | 2.081 | 5.39 | 0.00 | 4.8 | 95.2 | 0.0 | 0.08 | 0.50 | 0.81 | 0.83 | 4.07 | 21701 | 1496 | 8 | 0 | 11 | 0 | 10337 | logfile |
✔ | 6MRU | 9213 | 2022-04-04 | 2018-10-15 | 3.2 | 3.31 | — | 3.3 | 0.005 | 0.73 | 0.0 | 0.04 | 10.16 | 0.01 | 2.297 | 2.27 | 0.82 | 1.4 | 98.6 | 0.0 | -1.59 | 0.72 | 0.83 | 3.34 | 3.3 | 0.002 | 0.46 | 0.0 | 0.03 | 13.26 | 0.00 | 2.192 | 3.53 | 0.00 | 0.6 | 99.4 | 0.0 | 5.66 | 3.08 | 0.75 | 0.86 | 1.81 | 29107 | 3705 | 13 | 0 | 0 | 0 | 0 | logfile |
✔ | 6X0V | 21985 | 2022-04-04 | 2020-05-17 | 4.5 | 4.37 | — | 4.4 | 0.003 | 0.62 | 1.0 | 0.04 | 11.58 | 0.00 | 2.285 | 15.16 | 4.48 | 3.5 | 96.0 | 0.5 | -2.45 | 0.40 | 0.74 | — | 4.4 | 0.002 | 0.46 | 0.0 | 0.04 | 13.09 | 0.00 | 2.230 | 19.17 | 0.00 | 6.0 | 94.0 | 0.0 | 2.59 | 1.22 | 0.40 | 0.75 | — | 1384 | 211 | 4 | 0 | 0 | 0 | 62 | logfile |
✔ | 7oNJ | 12996 | 2022-04-06 | 2021-05-25 | 2.3 | 2.52 | 2.24 | 2.5 | 0.011 | 0.97 | 0.0 | 0.06 | 18.45 | 0.00 | 2.155 | 8.48 | 0.47 | 0.8 | 99.2 | 0.0 | -0.25 | 0.76 | 0.88 | 5.16 | 2.5 | 0.003 | 0.46 | 0.0 | 0.04 | 18.21 | 0.00 | 2.171 | 7.75 | 0.47 | 0.8 | 99.2 | 0.0 | 2.22 | 1.55 | 0.76 | 0.89 | 4.35 | 16947 | 1834 | 21 | 0 | 63 | 266 | 0 | logfile |