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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8D9N | 27267 | 2023-02-18 | 2022-06-10 | 4.4 | 4.74 | 3.88 | 34.0 | 0.003 | 0.60 | 0.0 | 0.04 | 13.21 | 0.00 | 2.107 | 2.77 | 0.38 | 5.8 | 94.2 | 0.0 | -0.81 | 0.28 | -0.07 | — | 20.0 | 0.002 | 0.66 | 0.0 | 0.04 | 13.34 | 0.00 | 2.212 | 4.39 | 0.00 | 4.6 | 95.4 | 0.0 | 0.37 | 0.56 | 0.40 | -0.02 | — | 7186 | 902 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6M71 | 11007 | 2023-02-18 | 2020-03-16 | 2.9 | 3.22 | 3.22 | 51.0 | 0.003 | 0.59 | 0.0 | 0.04 | 13.42 | 0.00 | 1.966 | 8.99 | 0.00 | 4.2 | 95.8 | 0.0 | -3.06 | 0.04 | 0.02 | 0.33 | 3.1 | 0.004 | 0.73 | 0.0 | 0.04 | 15.84 | 0.00 | 2.163 | 13.70 | 3.17 | 5.0 | 95.0 | 0.0 | -0.20 | 1.62 | 0.06 | 0.05 | -0.05 | 8614 | 1085 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RJU | 4906 | 2023-02-16 | 2019-04-29 | 3.2 | 4.49 | 2.14 | 10.0 | 0.007 | 0.93 | 0.0 | 0.05 | 15.36 | 0.00 | 2.423 | 4.52 | 0.00 | 11.6 | 88.4 | 0.0 | -7.10 | 0.22 | -0.01 | -0.80 | 9.8 | 0.003 | 0.63 | 0.0 | 0.03 | 15.97 | 0.00 | 2.424 | 6.03 | 0.00 | 6.2 | 93.8 | 0.0 | -0.13 | 1.31 | 0.27 | 0.05 | 0.48 | 1992 | 131 | 1 | 0 | 0 | 0 | 997 | logfile |
✔ | 5M6S | 3451 | 2023-02-16 | 2016-10-25 | 4.8 | 5.27 | — | 6.5 | 0.005 | 0.84 | 0.0 | 0.04 | 27.97 | 0.00 | 2.447 | 23.24 | 44.05 | 7.3 | 89.6 | 3.1 | -5.37 | 0.01 | 0.04 | — | 5.6 | 0.003 | 0.63 | 0.0 | 0.03 | 18.81 | 0.00 | 1.995 | 10.68 | 0.00 | 6.2 | 93.8 | 0.0 | 2.64 | 2.46 | 0.03 | 0.08 | — | 1593 | 98 | 1 | 0 | 0 | 0 | 793 | logfile |
✔ | 7EFo | 31087 | 2023-02-18 | 2021-03-22 | 3.85 | 4.26 | — | 38.0 | 0.010 | 1.20 | 1.0 | 0.15 | 17.15 | 0.01 | 2.071 | 58.70 | 6.18 | 7.1 | 92.8 | 0.1 | -2.21 | 0.11 | 0.02 | -0.28 | 4.2 | 0.003 | 0.76 | 0.0 | 0.04 | 17.43 | 0.00 | 2.154 | 18.19 | 0.39 | 6.0 | 94.0 | 0.0 | -1.06 | 2.12 | 0.15 | 0.09 | 0.19 | 7306 | 916 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 6VYB | 22748 | 2023-02-24 | 2020-02-25 | 3.2 | 3.61 | 4.19 | 10.0 | 0.014 | 1.36 | 1.0 | 0.09 | 10.35 | 0.01 | 2.299 | 0.53 | 0.13 | 2.4 | 97.5 | 0.1 | 0.50 | -0.01 | -0.01 | 0.12 | 3.4 | 0.003 | 0.66 | 0.0 | 0.05 | 12.68 | 0.00 | 2.123 | 10.83 | 0.09 | 4.0 | 96.0 | 0.1 | -0.55 | 1.03 | 0.03 | 0.09 | 0.43 | 22365 | 2875 | 18 | 0 | 59 | 0 | 0 | logfile |
✔ | 6VXX | 24693 | 2023-02-24 | 2020-02-25 | 2.8 | 3.28 | 2.89 | 39.0 | 0.016 | 1.35 | 0.0 | 0.09 | 10.67 | 0.01 | 2.389 | 0.81 | 0.23 | 2.4 | 97.6 | 0.0 | 0.27 | 0.07 | 0.00 | 0.14 | 2.8 | 0.003 | 0.69 | 0.0 | 0.05 | 13.86 | 0.00 | 2.095 | 12.22 | 2.00 | 3.9 | 96.1 | 0.0 | -0.28 | 1.68 | 0.14 | 0.11 | 0.11 | 23694 | 2916 | 21 | 0 | 63 | 0 | 0 | logfile |
✔ | 6ZGE | 23580 | 2023-02-26 | 2020-06-18 | 2.6 | 2.72 | 2.67 | 20.0 | 0.009 | 0.91 | 0.0 | 0.06 | 12.46 | 0.01 | 2.344 | 2.22 | 0.73 | 4.7 | 95.2 | 0.1 | -0.97 | 0.06 | 0.00 | 0.14 | 20.0 | 0.005 | 0.78 | 0.0 | 0.05 | 13.62 | 0.00 | 2.128 | 9.50 | 1.01 | 4.8 | 95.2 | 0.0 | -0.90 | 0.80 | 0.12 | 0.12 | 0.37 | 26991 | 3294 | 39 | 0 | 81 | 48 | 0 | logfile |
✔ | 6UZZ | 33318 | 2023-02-21 | 2019-11-16 | 3.1 | 3.28 | 3.51 | 36.0 | 0.009 | 0.92 | 0.0 | 0.06 | 10.61 | 0.01 | 2.325 | 2.53 | 0.24 | 1.8 | 98.0 | 0.2 | -4.22 | 0.02 | 0.00 | 0.27 | 3.1 | 0.003 | 0.66 | 0.0 | 0.04 | 14.00 | 0.00 | 2.048 | 10.48 | 0.12 | 3.1 | 96.9 | 0.0 | 1.34 | 2.50 | 0.07 | 0.13 | -0.03 | 15832 | 1984 | 12 | 0 | 8 | 0 | 0 | logfile |
✔ | 6N4B | 0745 | 2023-02-18 | 2018-11-18 | 3.0 | 3.44 | — | 39.0 | 0.011 | 1.40 | 4.0 | 0.09 | 9.55 | 0.01 | 1.855 | 20.11 | 0.84 | 2.7 | 97.3 | 0.0 | -2.27 | 0.08 | 0.01 | 0.16 | 3.4 | 0.004 | 0.81 | 0.0 | 0.04 | 12.42 | 0.00 | 2.081 | 12.08 | 0.96 | 5.4 | 94.6 | 0.0 | -0.45 | 1.11 | 0.13 | 0.14 | 0.19 | 8453 | 1121 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 5LNK | 4481 | 2023-02-24 | 2016-08-04 | 3.9 | 3.95 | 17.72 | 71.0 | 0.007 | 1.05 | 0.0 | 1.04 | 10.85 | 0.01 | 2.038 | 25.42 | 0.32 | 12.6 | 86.9 | 0.5 | -4.85 | 0.01 | 0.00 | 0.13 | 40.0 | 0.009 | 1.71 | 0.0 | 0.31 | 13.69 | 0.01 | 1.425 | 16.41 | 0.33 | 10.3 | 89.5 | 0.3 | -1.27 | 0.81 | 0.05 | 0.14 | 0.19 | 63760 | 7918 | 61 | 0 | 144 | 0 | 0 | logfile |
✔ | 6CAJ | 23209 | 2023-02-25 | 2018-01-31 | 2.8 | 3.42 | — | 70.0 | 0.008 | 0.88 | 0.0 | 0.17 | 9.84 | 0.01 | 1.467 | 5.88 | 0.24 | 4.5 | 95.5 | 0.0 | -3.63 | 0.12 | 0.02 | -0.04 | 2.9 | 0.003 | 0.73 | 0.0 | 0.04 | 14.60 | 0.01 | 2.063 | 15.80 | 3.90 | 5.9 | 94.1 | 0.0 | -1.06 | 1.40 | 0.15 | 0.14 | 0.02 | 24295 | 3210 | 11 | 0 | 1 | 0 | 0 | logfile |
✔ | 7SC1 | 26879 | 2023-02-27 | 2021-09-26 | 3.2 | 3.82 | 3.39 | 20.0 | 0.006 | 0.60 | 0.0 | 0.05 | 14.85 | 0.00 | 2.169 | 10.07 | 0.06 | 4.0 | 96.0 | 0.0 | -0.55 | 0.14 | 0.01 | -0.05 | 3.3 | 0.003 | 0.66 | 0.0 | 0.05 | 16.70 | 0.00 | 2.082 | 13.14 | 0.37 | 3.8 | 96.2 | 0.0 | -0.67 | 0.87 | 0.20 | 0.14 | 0.03 | 29415 | 3705 | 12 | 0 | 45 | 0 | 0 | logfile |
✔ | 8GWB | 34308 | 2023-02-24 | 2022-09-16 | 2.75 | 2.95 | 2.85 | 25.0 | 0.009 | 1.07 | 1.0 | 0.05 | 16.02 | 0.01 | 1.556 | 16.84 | 2.25 | 7.5 | 92.3 | 0.2 | -2.40 | 0.29 | 0.01 | 0.23 | 25.0 | 0.003 | 0.74 | 0.0 | 0.04 | 16.77 | 0.00 | 2.117 | 17.29 | 2.69 | 7.5 | 92.4 | 0.1 | -1.54 | 1.60 | 0.34 | 0.15 | 0.46 | 21879 | 2655 | 16 | 54 | 10 | 7 | 0 | logfile |
✔ | 7CHH | 30374 | 2023-02-26 | 2020-07-05 | 3.49 | 2.44 | — | 20.0 | 0.007 | 1.09 | 0.0 | 0.06 | 15.08 | 0.01 | 2.182 | 4.90 | 3.56 | 5.2 | 94.7 | 0.1 | -2.03 | 0.17 | 0.02 | 0.23 | 2.3 | 0.012 | 1.20 | 0.0 | 0.06 | 16.17 | 0.01 | 1.881 | 22.73 | 0.74 | 8.9 | 91.0 | 0.1 | -2.21 | 1.48 | 0.21 | 0.15 | 0.59 | 29029 | 3704 | 17 | 0 | 41 | 0 | 0 | logfile |
✔ | 5MSH | 3565 | 2023-02-17 | 2017-01-04 | 4.25 | 3.96 | — | 20.0 | 0.014 | 1.56 | 0.0 | 0.07 | 9.56 | 0.01 | 2.323 | 3.07 | 0.00 | 6.1 | 92.5 | 1.5 | -0.93 | 0.01 | 0.02 | — | 3.7 | 0.004 | 0.86 | 0.0 | 0.05 | 12.82 | 0.01 | 2.120 | 16.79 | 0.00 | 6.8 | 93.0 | 0.2 | -1.06 | 2.67 | 0.05 | 0.16 | — | 4287 | 551 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XMX | 33307 | 2023-02-26 | 2022-04-27 | 3.62 | 3.63 | 3.44 | 22.0 | 0.011 | 1.29 | 7.0 | 0.09 | 12.50 | 0.01 | 1.407 | 4.82 | 1.34 | 6.6 | 93.3 | 0.1 | -0.95 | 0.29 | 0.01 | 0.23 | 20.0 | 0.003 | 0.68 | 0.0 | 0.04 | 14.28 | 0.00 | 2.027 | 11.86 | 0.35 | 5.9 | 94.0 | 0.1 | -1.06 | 1.13 | 0.36 | 0.17 | 0.19 | 28727 | 3700 | 12 | 0 | 24 | 0 | 0 | logfile |
✔ | 8FD5 | 29002 | 2023-02-17 | 2022-12-02 | 4.57 | 4.19 | — | 10.0 | 0.016 | 2.15 | 4.0 | 0.13 | 13.14 | 0.02 | 2.541 | 0.16 | 0.29 | 3.8 | 96.2 | 0.0 | -1.38 | 0.28 | 0.02 | — | 3.5 | 0.004 | 0.81 | 0.0 | 0.04 | 13.27 | 0.01 | 2.112 | 15.37 | 0.00 | 6.2 | 93.8 | 0.0 | -1.75 | 1.59 | 0.40 | 0.17 | — | 3214 | 419 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7D77 | 32838 | 2023-02-18 | 2020-10-03 | 2.9 | 3.07 | — | 20.0 | 0.008 | 0.78 | 0.0 | 0.06 | 13.51 | 0.00 | 2.107 | 8.48 | 0.21 | 3.7 | 96.3 | 0.0 | -2.58 | 0.07 | 0.01 | 0.37 | 3.0 | 0.005 | 0.85 | 0.0 | 0.05 | 15.51 | 0.01 | 2.082 | 17.53 | 2.15 | 5.8 | 94.1 | 0.1 | -0.58 | 1.02 | 0.14 | 0.18 | 0.47 | 8785 | 1105 | 7 | 0 | 7 | 1 | 0 | logfile |
✔ | 6Z5U | 11082 | 2023-02-22 | 2020-05-27 | 3.9 | 4.52 | — | 38.0 | 0.021 | 1.88 | 10.0 | 0.11 | 11.91 | 0.01 | 0.901 | 4.89 | 1.69 | 2.0 | 97.7 | 0.3 | -0.47 | 0.18 | 0.03 | -0.06 | 4.5 | 0.003 | 0.75 | 0.0 | 0.04 | 14.67 | 0.00 | 1.976 | 13.04 | 0.15 | 5.4 | 94.5 | 0.0 | -0.66 | 1.65 | 0.30 | 0.18 | 0.61 | 17880 | 2334 | 14 | 0 | 4 | 0 | 0 | logfile |