Table showing results for October 2021

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7A6A	11668	2021-10-06	2020-08-25	1.15	1.13	—	1.2	0.018	1.71	24.0	0.16	14.70	0.01	1.857	3.78	3.03	1.2	98.8	0.0	2.45	0.47	0.61	9.02	1.2	0.002	0.56	0.0	0.04	15.27	0.00	2.248	2.86	1.82	1.8	98.2	0.0	4.70	0.46	0.69	0.81	8.90	41613	4152	72	0	32	4621	0	logfile
✔	7K3V	22657	2021-10-07	2020-09-14	1.34	1.44	—	1.4	0.005	0.79	0.0	0.04	14.68	0.00	0.211	2.71	0.00	1.2	98.8	0.0	3.60	0.69	0.78	8.90	1.4	0.004	0.73	0.0	0.04	14.87	0.00	1.997	1.97	0.00	1.2	98.8	0.0	3.91	0.32	0.72	0.82	8.91	38406	4128	72	0	334	2672	0	logfile
✔	7oUG	13076	2021-10-04	2021-06-11	3.1	2.33	3.12	1.7	0.005	0.73	0.0	0.04	17.64	0.01	1.769	5.56	0.14	2.4	97.6	0.0	0.28	0.78	0.75	2.41	1.5	0.007	0.93	0.0	0.04	19.55	0.01	1.687	12.28	0.41	2.1	97.9	0.0	0.00	0.65	0.78	0.78	2.14	15090	1664	16	80	10	8	0	logfile
✔	7M4W	23668	2021-10-06	2021-03-22	2.55	1.74	—	1.6	0.008	0.57	0.0	0.05	15.01	0.01	1.760	3.05	0.02	2.8	97.0	0.2	1.38	0.77	0.74	3.81	1.5	0.009	1.00	0.0	0.05	16.39	0.01	1.651	5.30	2.58	3.8	96.1	0.2	-0.01	0.92	0.80	0.78	3.83	137923	5518	76	4373	195	797	0	logfile
✔	7M4Y	23670	2021-10-06	2021-03-22	2.5	1.72	—	1.5	0.008	0.60	2.0	0.05	16.30	0.02	1.783	3.39	2.14	2.5	97.3	0.2	1.41	0.77	0.73	3.74	1.5	0.007	0.91	0.0	0.05	16.57	0.01	1.638	4.89	3.37	3.3	96.6	0.1	0.19	1.25	0.81	0.79	3.77	139817	5511	80	4453	200	1044	0	logfile
✔	7K3W	22658	2021-10-07	2020-09-14	1.36	1.48	—	1.5	0.005	0.76	0.0	0.04	14.50	0.00	1.934	2.97	0.00	1.8	98.2	0.0	3.35	0.73	0.80	9.05	1.5	0.003	0.64	0.0	0.04	14.89	0.00	2.035	2.19	0.00	1.8	98.2	0.0	4.31	0.17	0.74	0.80	9.20	39086	4128	72	0	382	2680	0	logfile
✔	7M4X	23669	2021-10-06	2021-03-22	2.66	1.75	—	1.6	0.008	0.57	0.0	0.05	15.13	0.01	1.789	3.60	0.00	2.5	97.4	0.1	1.32	0.77	0.73	3.46	1.6	0.009	1.00	0.0	0.05	16.50	0.01	1.583	5.67	2.60	3.8	96.0	0.1	0.03	0.40	0.81	0.79	3.33	139446	5528	73	4453	194	552	0	logfile
✔	7oUF	13075	2021-10-04	2021-06-11	3.0	2.26	3.09	1.7	0.005	0.57	0.0	0.04	17.33	0.00	1.686	6.05	0.14	1.8	98.2	0.0	0.10	0.78	0.75	3.06	1.6	0.010	1.13	0.0	0.04	19.83	0.01	1.785	13.39	1.58	2.1	97.9	0.0	0.20	1.77	0.79	0.79	2.67	15094	1664	16	80	10	12	0	logfile
✔	7o6E	12738	2021-10-06	2021-04-10	2.1	1.78	2.15	1.6	0.017	1.10	0.0	0.07	18.13	0.01	2.110	3.49	0.00	2.3	97.7	0.0	2.10	0.87	0.88	6.02	1.6	0.004	0.49	0.0	0.03	18.22	0.01	2.202	3.30	0.69	1.0	99.0	0.0	4.35	0.28	0.88	0.89	5.30	35304	4248	48	0	0	1392	0	logfile
✔	7L1Q	23115	2021-10-05	2020-12-15	3.4	2.29	—	2.0	0.008	1.29	6.0	0.07	14.92	0.01	1.807	2.65	2.54	3.7	96.1	0.2	-0.80	0.72	0.67	1.56	1.6	0.005	0.87	0.0	0.05	18.12	0.01	1.833	17.31	1.09	5.6	94.4	0.0	-0.64	2.09	0.73	0.73	1.73	24204	3118	13	0	13	0	0	logfile
✔	7P13	13154	2021-10-04	2021-07-01	2.29	1.96	2.28	1.7	0.016	1.06	0.0	0.07	14.07	0.01	2.430	5.24	0.00	3.3	96.7	0.0	2.06	0.82	0.87	4.22	1.6	0.003	0.48	0.0	0.03	17.14	0.00	2.005	14.47	1.59	2.4	97.6	0.0	5.03	0.51	0.83	0.87	3.65	13727	1743	7	0	0	0	154	logfile
✔	6W6P	21562	2021-10-06	2020-03-17	2.9	2.21	—	1.7	0.010	1.07	0.0	0.06	16.55	0.01	1.989	6.41	16.52	12.1	87.6	0.3	-4.00	0.77	0.84	2.96	1.7	0.006	0.83	0.0	0.05	16.36	0.01	1.976	6.03	8.53	9.6	90.3	0.1	-2.00	1.60	0.78	0.86	2.67	133554	5058	51	4378	4	0	0	logfile
✔	7KBB	22788	2021-10-03	2020-10-01	4.02	2.37	4.07	2.0	0.006	1.16	0.0	0.06	14.88	0.01	2.073	14.42	1.58	5.4	94.1	0.5	-1.59	0.57	0.58	—	1.7	0.010	1.22	0.0	0.05	14.74	0.01	2.165	21.55	0.00	8.1	91.9	0.0	-0.95	0.72	0.59	0.60	—	6422	812	7	0	0	0	0	logfile
✔	7K00	22586	2021-10-10	2020-09-02	1.98	1.72	—	1.9	0.007	0.97	3.0	0.05	15.24	0.02	1.588	7.33	6.32	3.9	96.0	0.1	-1.76	0.69	0.83	5.00	1.8	0.006	0.86	1.0	0.04	15.28	0.01	1.814	8.24	3.08	4.0	96.0	0.0	0.03	0.87	0.71	0.86	4.97	149338	5585	117	4555	331	7248	0	logfile
✔	7C7S	30301	2021-10-03	2020-05-26	2.9	2.38	—	1.8	0.006	0.77	0.0	0.14	13.76	0.01	2.153	7.81	0.00	3.7	96.3	0.0	-2.62	0.83	0.80	2.82	1.8	0.006	0.86	0.0	0.04	15.86	0.01	2.170	8.59	3.14	4.1	95.9	0.0	-0.28	0.59	0.84	0.82	2.85	10915	1355	4	0	9	0	0	logfile
✔	7L1S	23117	2021-10-05	2020-12-15	3.6	2.22	—	2.3	0.011	1.81	37.0	0.12	14.05	0.01	2.011	4.35	4.07	3.3	96.6	0.2	-0.43	0.62	0.68	1.03	1.8	0.005	0.87	0.0	0.05	17.96	0.01	1.820	18.21	0.78	4.3	95.7	0.0	-0.18	1.73	0.66	0.69	0.77	24176	3118	12	0	11	0	0	logfile
✔	7M3G	23654	2021-10-04	2021-03-18	2.5	2.29	—	1.8	0.007	1.00	14.0	0.06	16.87	0.01	2.281	2.21	0.93	3.0	97.0	0.0	-2.02	0.84	0.85	3.70	1.8	0.005	0.66	14.0	0.04	17.32	0.01	2.174	4.08	2.72	3.9	96.1	0.0	-0.10	0.33	0.85	0.86	3.49	13298	1627	11	0	41	0	0	logfile
✔	7A5V	11657	2021-10-05	2020-08-22	1.7	1.73	1.69	1.8	0.014	1.65	0.0	0.09	13.53	0.02	0.000	2.30	0.48	2.2	97.8	0.0	-0.05	0.61	0.79	6.90	1.8	0.003	0.68	0.0	0.05	14.15	0.00	0.000	5.41	0.43	0.8	99.2	0.0	1.72	0.92	0.72	0.85	6.39	21155	2275	30	0	85	1015	0	logfile
✔	7N1X	24126	2021-10-05	2021-05-28	4.0	2.34	—	1.8	0.013	1.88	13.0	0.14	14.66	0.01	1.484	9.71	1.97	8.1	91.3	0.6	-2.39	0.80	0.69	—	1.8	0.004	0.78	0.0	0.05	16.39	0.01	2.119	14.29	0.63	4.8	95.2	0.0	-1.07	2.00	0.80	0.69	—	26810	3257	35	0	95	0	0	logfile
✔	6TAX	10429	2021-10-06	2019-10-31	3.2	2.63	—	1.9	0.009	1.13	0.0	0.06	11.18	0.01	2.065	5.47	0.46	9.5	90.3	0.2	-4.10	0.88	0.80	3.18	1.9	0.003	0.67	0.0	0.04	13.77	0.00	2.020	9.13	0.13	7.5	92.5	0.0	0.05	1.92	0.88	0.81	1.88	35235	4349	1	0	71	0	0	logfile

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