The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6K0B | 9900 | 2023-02-25 | 2019-05-05 | 4.3 | 4.49 | — | 4.2 | 0.003 | 0.78 | 0.0 | 0.04 | 14.21 | 0.01 | 2.011 | 5.73 | 0.66 | 6.1 | 93.9 | 0.0 | -3.67 | 0.84 | 0.69 | — | 4.2 | 0.003 | 0.67 | 0.0 | 0.04 | 15.27 | 0.01 | 2.109 | 20.53 | 0.00 | 6.6 | 93.4 | 0.0 | -0.69 | 1.79 | 0.88 | 0.79 | — | 25908 | 1376 | 16 | 682 | 2 | 0 | 0 | logfile |
✔ | 7NT6 | 12584 | 2023-02-25 | 2021-03-09 | 4.3 | 4.34 | 3.99 | 3.3 | 0.012 | 2.07 | 0.0 | 0.15 | 8.75 | 0.01 | 2.119 | 1.13 | 0.00 | 4.0 | 95.6 | 0.3 | -2.44 | 0.72 | 0.76 | — | 3.3 | 0.002 | 0.62 | 0.0 | 0.05 | 8.09 | 0.00 | 2.161 | 2.67 | 0.00 | 4.4 | 95.6 | 0.0 | 1.97 | 0.64 | 0.71 | 0.71 | — | 24128 | 5582 | 17 | 90 | 0 | 0 | 0 | logfile |
✔ | 7NV0 | 12601 | 2023-02-19 | 2021-03-15 | 3.4 | 2.96 | — | 2.9 | 0.011 | 1.13 | 0.0 | 0.06 | 19.63 | 0.01 | 2.205 | 8.09 | 1.30 | 8.1 | 91.9 | 0.0 | -4.56 | 0.60 | 0.68 | 2.36 | 2.9 | 0.003 | 0.68 | 0.0 | 0.04 | 20.46 | 0.00 | 1.491 | 12.21 | 0.54 | 2.2 | 97.8 | 0.0 | -0.94 | 0.71 | 0.58 | 0.69 | 1.64 | 9928 | 1180 | 7 | 53 | 1 | 0 | 0 | logfile |
✔ | 7R19 | 14235 | 2023-02-25 | 2022-02-02 | 3.3 | 3.69 | 3.53 | 3.6 | 0.003 | 0.56 | 0.0 | 0.04 | 11.35 | 0.01 | 2.179 | 4.01 | 0.18 | 2.1 | 97.9 | 0.0 | 0.42 | 0.82 | 0.83 | 2.64 | 3.6 | 0.003 | 0.57 | 0.0 | 0.04 | 13.63 | 0.00 | 2.240 | 5.53 | 0.14 | 3.3 | 96.7 | 0.0 | 0.04 | 0.52 | 0.85 | 0.86 | 2.46 | 25388 | 3178 | 10 | 0 | 38 | 0 | 0 | logfile |
✔ | 7E0F | 30931 | 2023-02-16 | 2021-01-27 | 3.02 | 3.18 | — | 3.5 | 0.016 | 0.99 | 0.0 | 0.07 | 15.88 | 0.00 | 2.341 | 9.76 | 0.00 | 12.8 | 87.2 | 0.0 | -5.10 | 0.39 | 0.81 | 5.04 | 3.4 | 0.004 | 0.64 | 0.0 | 0.05 | 16.57 | 0.00 | 2.397 | 4.15 | 0.49 | 7.8 | 92.2 | 0.0 | -3.39 | 1.23 | 0.39 | 0.80 | 3.92 | 2022 | 294 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DR6 | 30824 | 2023-02-23 | 2020-12-26 | 4.1 | 4.22 | — | 4.2 | 0.002 | 0.55 | 0.0 | 0.04 | 7.81 | 0.00 | 2.196 | 10.04 | 0.12 | 4.9 | 94.9 | 0.1 | -2.74 | 0.68 | 0.63 | — | 4.2 | 0.004 | 0.77 | 0.0 | 0.05 | 13.22 | 0.00 | 2.079 | 15.90 | 0.06 | 3.7 | 96.2 | 0.0 | 0.18 | 2.26 | 0.73 | 0.72 | — | 59957 | 7661 | 35 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Z2G | 14465 | 2023-02-18 | 2022-02-26 | 3.65 | 3.52 | 3.63 | 3.6 | 0.007 | 0.73 | 1.0 | 0.05 | 17.04 | 0.02 | 2.324 | 8.01 | 0.24 | 3.9 | 96.1 | 0.0 | -0.62 | 0.63 | 0.76 | 2.35 | 3.6 | 0.003 | 0.69 | 0.0 | 0.04 | 18.39 | 0.01 | 2.142 | 9.04 | 0.12 | 3.7 | 96.3 | 0.0 | -0.35 | 0.39 | 0.63 | 0.76 | 2.15 | 8406 | 943 | 4 | 36 | 1 | 0 | 0 | logfile |
✔ | 6XFA | 22168 | 2023-02-28 | 2020-06-15 | 3.6 | 3.70 | — | 3.6 | 0.006 | 0.66 | 0.0 | 0.05 | 14.34 | 0.00 | 2.205 | 5.84 | 0.57 | 8.0 | 92.0 | 0.0 | -3.71 | 0.81 | 0.85 | 2.34 | 3.7 | 0.004 | 0.67 | 0.0 | 0.04 | 15.69 | 0.00 | 2.248 | 6.06 | 0.26 | 6.3 | 93.7 | 0.0 | 0.03 | 1.23 | 0.79 | 0.86 | 1.86 | 31730 | 4060 | 20 | 0 | 20 | 0 | 0 | logfile |
✔ | 7TMQ | 25999 | 2023-02-28 | 2022-01-19 | 3.3 | 3.42 | — | 3.4 | 0.004 | 0.57 | 2.0 | 0.04 | 12.67 | 0.00 | 2.026 | 9.95 | 0.38 | 2.7 | 97.3 | 0.0 | 1.28 | 0.77 | 0.83 | 3.33 | 3.4 | 0.004 | 0.54 | 0.0 | 0.04 | 13.96 | 0.00 | 1.947 | 9.19 | 0.38 | 2.9 | 97.1 | 0.0 | 1.25 | 0.27 | 0.79 | 0.86 | 2.79 | 31642 | 4736 | 16 | 0 | 2 | 0 | 0 | logfile |
✔ | 6DV3 | 8914 | 2023-02-22 | 2018-06-22 | 4.1 | 4.29 | — | 4.3 | 0.008 | 1.19 | 0.0 | 0.06 | 12.83 | 0.01 | 1.837 | 8.62 | 5.67 | 5.2 | 94.8 | 0.0 | -4.68 | 0.63 | 0.69 | — | 4.3 | 0.003 | 0.72 | 0.0 | 0.05 | 12.62 | 0.00 | 2.023 | 10.79 | 0.02 | 3.7 | 96.3 | 0.0 | -1.65 | 0.84 | 0.63 | 0.82 | — | 57975 | 7500 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 7F8V | 31493 | 2023-02-17 | 2021-07-02 | 3.3 | 2.62 | — | 3.3 | 0.005 | 0.87 | 0.0 | 0.05 | 14.10 | 0.01 | 2.253 | 7.08 | 0.00 | 4.1 | 95.9 | 0.0 | -1.49 | 0.53 | 0.65 | 1.98 | 3.3 | 0.003 | 0.63 | 0.0 | 0.04 | 16.03 | 0.00 | 2.150 | 13.09 | 0.28 | 4.1 | 95.9 | 0.0 | -0.72 | 1.12 | 0.53 | 0.68 | 1.26 | 6601 | 848 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SVV | 25454 | 2023-02-24 | 2021-11-19 | 3.54 | 3.06 | 3.44 | 3.5 | 0.020 | 1.88 | 10.0 | 0.10 | 14.27 | 0.01 | 1.320 | 4.73 | 0.00 | 1.4 | 98.6 | 0.0 | -0.21 | 0.56 | 0.75 | 2.17 | 3.4 | 0.003 | 0.55 | 0.0 | 0.04 | 18.07 | 0.00 | 1.922 | 5.10 | 0.21 | 3.3 | 96.7 | 0.0 | 1.44 | 1.61 | 0.61 | 0.82 | 1.70 | 23046 | 2710 | 32 | 38 | 20 | 0 | 0 | logfile |
✔ | 7KGi | 22871 | 2023-02-24 | 2020-10-16 | 3.34 | 3.13 | — | 3.2 | 0.005 | 0.81 | 2.0 | 0.05 | 14.36 | 0.01 | 2.021 | 7.63 | 0.82 | 1.9 | 98.1 | 0.0 | 1.36 | 0.64 | 0.77 | 2.19 | 3.1 | 0.005 | 0.66 | 0.0 | 0.04 | 16.28 | 0.00 | 2.165 | 9.66 | 0.47 | 2.1 | 97.9 | 0.0 | 1.17 | 0.44 | 0.67 | 0.82 | 2.04 | 23533 | 3060 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 7R8C | 24315 | 2023-02-18 | 2021-06-26 | 3.7 | 4.19 | — | 4.1 | 0.002 | 0.49 | 0.0 | 0.04 | 12.82 | 0.00 | 2.073 | 6.73 | 0.21 | 4.8 | 95.2 | 0.0 | -1.63 | 0.68 | 0.85 | 1.76 | 4.1 | 0.002 | 0.66 | 0.0 | 0.04 | 14.79 | 0.00 | 2.156 | 8.76 | 0.21 | 5.1 | 94.9 | 0.0 | 1.17 | 1.05 | 0.71 | 0.87 | 1.83 | 8538 | 1090 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N38 | 9341 | 2023-02-25 | 2018-11-14 | 3.7 | 3.82 | — | 3.8 | 0.013 | 1.29 | 0.0 | 0.08 | 10.00 | 0.01 | 2.216 | 1.17 | 0.31 | 2.7 | 97.2 | 0.1 | 0.10 | 0.78 | 0.79 | 2.54 | 3.7 | 0.002 | 0.65 | 0.0 | 0.04 | 14.39 | 0.00 | 2.192 | 6.42 | 0.16 | 2.2 | 97.8 | 0.0 | 0.89 | 0.83 | 0.81 | 0.83 | 2.23 | 24456 | 3098 | 11 | 0 | 39 | 0 | 0 | logfile |
✔ | 7AWA | 11928 | 2023-02-17 | 2020-11-06 | 3.5 | 3.83 | — | 3.6 | 0.003 | 0.64 | 0.0 | 0.04 | 14.22 | 0.00 | 2.126 | 6.77 | 0.00 | 5.8 | 94.2 | 0.0 | -2.52 | 0.57 | 0.81 | 2.14 | 3.7 | 0.002 | 0.52 | 0.0 | 0.04 | 15.06 | 0.00 | 2.163 | 6.96 | 0.00 | 3.7 | 96.3 | 0.0 | -0.59 | 1.17 | 0.54 | 0.80 | 1.51 | 5310 | 328 | 1 | 0 | 0 | 0 | 2703 | logfile |
✔ | 6ZGF | 11204 | 2023-02-25 | 2020-06-18 | 3.1 | 3.27 | 3.13 | 3.2 | 0.007 | 0.84 | 0.0 | 0.07 | 13.24 | 0.02 | 2.112 | 5.22 | 0.76 | 6.5 | 93.5 | 0.0 | -2.49 | 0.80 | 0.85 | 3.88 | 3.2 | 0.003 | 0.58 | 0.0 | 0.04 | 14.58 | 0.00 | 2.217 | 4.64 | 0.18 | 5.7 | 94.3 | 0.0 | -1.33 | 0.37 | 0.79 | 0.87 | 3.41 | 26163 | 3180 | 36 | 0 | 93 | 0 | 0 | logfile |
✔ | 7R17 | 14233 | 2023-02-24 | 2022-02-02 | 3.7 | 4.04 | 3.84 | 3.9 | 0.003 | 0.50 | 0.0 | 0.04 | 12.77 | 0.01 | 2.221 | 5.15 | 0.50 | 3.1 | 96.9 | 0.0 | 0.37 | 0.83 | 0.83 | 2.01 | 3.9 | 0.002 | 0.51 | 0.0 | 0.04 | 14.34 | 0.00 | 2.136 | 7.04 | 0.12 | 3.1 | 96.9 | 0.0 | 0.63 | 0.42 | 0.82 | 0.82 | 1.45 | 23626 | 2981 | 7 | 0 | 22 | 0 | 0 | logfile |
✔ | 7oRJ | 13039 | 2023-02-22 | 2021-06-06 | 3.9 | 3.52 | — | 3.6 | 0.006 | 0.80 | 0.0 | 0.05 | 13.37 | 0.00 | 2.203 | 8.52 | 0.71 | 3.3 | 96.7 | 0.0 | 0.20 | 0.77 | 0.77 | 1.81 | 3.6 | 0.003 | 0.54 | 0.0 | 0.04 | 14.85 | 0.00 | 2.143 | 10.44 | 0.05 | 2.9 | 97.1 | 0.0 | 0.49 | 1.67 | 0.78 | 0.78 | 1.72 | 18197 | 2129 | 5 | 35 | 3 | 0 | 0 | logfile |
✔ | 6PLZ | 20381 | 2023-02-21 | 2019-07-01 | 3.0 | 3.68 | — | 3.5 | 0.006 | 0.94 | 0.0 | 0.06 | 9.68 | 0.01 | 2.338 | 4.40 | 0.00 | 5.3 | 94.7 | 0.0 | -5.25 | 0.60 | 0.85 | 4.29 | 3.5 | 0.003 | 0.64 | 0.0 | 0.05 | 15.71 | 0.00 | 2.123 | 9.40 | 2.65 | 3.0 | 97.0 | 0.0 | -0.63 | 1.07 | 0.54 | 0.83 | 3.25 | 14210 | 1725 | 15 | 0 | 20 | 0 | 0 | logfile |