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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6MG8 | 9111 | 2024-03-11 | 2018-09-13 | 3.6 | 3.81 | 3.42 | 3.7 | 0.006 | 0.75 | 0.0 | 0.06 | 12.86 | 0.00 | 2.157 | 8.79 | 0.00 | 8.0 | 92.0 | 0.0 | -3.49 | 0.71 | 0.81 | 2.44 | 3.7 | 0.004 | 0.69 | 0.0 | 0.04 | 14.13 | 0.00 | 2.179 | 9.60 | 4.20 | 7.4 | 92.6 | 0.0 | -0.20 | 0.44 | 0.72 | 0.81 | 2.53 | 7034 | 985 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 6EVY | 3963 | 2024-03-24 | 2017-11-03 | 4.4 | 4.44 | — | 4.4 | 0.006 | 0.91 | 0.0 | 0.05 | 11.40 | 0.01 | 2.046 | 4.67 | 0.00 | 4.7 | 95.3 | 0.0 | -4.55 | 0.82 | 0.85 | — | 4.4 | 0.003 | 0.64 | 0.0 | 0.04 | 13.76 | 0.00 | 1.849 | 13.17 | 0.02 | 4.6 | 95.4 | 0.0 | -0.01 | 0.85 | 0.84 | 0.86 | — | 40890 | 5166 | 24 | 0 | 18 | 0 | 0 | logfile |
✔ | 7SF7 | 25076 | 2024-03-11 | 2021-10-03 | 2.9 | 2.36 | — | 2.2 | 0.005 | 0.78 | 0.0 | 0.05 | 12.92 | 0.00 | 2.234 | 6.27 | 0.56 | 7.5 | 92.5 | 0.0 | -1.73 | 0.75 | 0.74 | 2.07 | 2.2 | 0.003 | 0.61 | 0.0 | 0.04 | 15.71 | 0.00 | 2.167 | 7.39 | 3.10 | 8.6 | 91.4 | 0.0 | -1.17 | 0.49 | 0.77 | 0.78 | 1.53 | 6776 | 879 | 5 | 0 | 0 | 3 | 0 | logfile |
✔ | 7Z0L | 14427 | 2024-03-16 | 2022-02-23 | 4.0 | 4.43 | 4.11 | 4.3 | 0.005 | 0.95 | 0.0 | 0.06 | 15.67 | 0.01 | 2.223 | 7.63 | 0.65 | 5.5 | 94.5 | 0.0 | -0.67 | 0.58 | 0.49 | — | 4.4 | 0.003 | 0.67 | 0.0 | 0.04 | 15.03 | 0.00 | 2.059 | 12.52 | 2.84 | 3.7 | 96.3 | 0.0 | 0.36 | 0.94 | 0.59 | 0.52 | — | 13752 | 856 | 9 | 0 | 12 | 0 | 6713 | logfile |
✔ | 7TLY | 25990 | 2024-03-10 | 2022-01-19 | 3.0 | 3.01 | 2.93 | 3.0 | 0.010 | 1.32 | 2.0 | 0.08 | 12.98 | 0.00 | 2.556 | 1.69 | 0.00 | 2.5 | 97.5 | 0.0 | 0.36 | 0.64 | 0.76 | 4.98 | 3.0 | 0.003 | 0.60 | 0.0 | 0.04 | 13.34 | 0.01 | 2.213 | 4.05 | 2.46 | 2.0 | 98.0 | 0.0 | -1.14 | 1.03 | 0.68 | 0.83 | 5.07 | 3105 | 408 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7P8V | 13255 | 2024-03-10 | 2021-07-23 | 3.6 | 3.94 | — | 3.8 | 0.013 | 1.81 | 1.0 | 0.10 | 20.31 | 0.01 | 2.287 | 5.15 | 0.36 | 3.3 | 96.7 | 0.0 | -0.42 | 0.83 | 0.85 | 2.78 | 3.9 | 0.003 | 0.55 | 0.0 | 0.04 | 20.51 | 0.01 | 1.876 | 9.27 | 3.47 | 3.0 | 97.0 | 0.0 | -0.02 | 1.80 | 0.81 | 0.83 | 2.15 | 5988 | 662 | 6 | 35 | 4 | 0 | 0 | logfile |
✔ | 6EVX | 3962 | 2024-03-24 | 2017-11-03 | 4.2 | 4.39 | — | 4.4 | 0.005 | 0.79 | 0.0 | 0.05 | 11.49 | 0.01 | 1.671 | 4.01 | 0.00 | 4.3 | 95.7 | 0.0 | -4.77 | 0.82 | 0.81 | — | 4.4 | 0.003 | 0.65 | 0.0 | 0.04 | 14.24 | 0.00 | 1.944 | 13.02 | 0.05 | 4.2 | 95.8 | 0.0 | -0.77 | 1.69 | 0.84 | 0.83 | — | 40896 | 5166 | 24 | 6 | 18 | 0 | 0 | logfile |
✔ | 7RR0 | 24649 | 2024-03-10 | 2021-08-08 | 3.12 | 3.40 | — | 3.4 | 0.004 | 0.97 | 0.0 | 0.06 | 12.28 | 0.01 | 2.327 | 2.79 | 0.00 | 1.4 | 98.6 | 0.0 | 0.12 | 0.75 | 0.77 | 2.73 | 3.4 | 0.004 | 0.74 | 0.0 | 0.04 | 15.98 | 0.00 | 2.219 | 11.01 | 2.53 | 4.3 | 95.7 | 0.0 | 0.10 | 1.25 | 0.77 | 0.80 | 2.95 | 3297 | 422 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 7SF8 | 25077 | 2024-03-11 | 2021-10-03 | 2.7 | 2.25 | — | 2.1 | 0.005 | 0.74 | 0.0 | 0.05 | 13.03 | 0.00 | 2.270 | 4.24 | 0.14 | 4.7 | 95.3 | 0.0 | 0.40 | 0.80 | 0.80 | 3.25 | 2.1 | 0.004 | 0.57 | 0.0 | 0.04 | 15.71 | 0.00 | 2.158 | 4.77 | 2.50 | 4.7 | 95.3 | 0.0 | 1.05 | 1.00 | 0.82 | 0.84 | 3.44 | 6661 | 860 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZYZ | 15029 | 2024-03-10 | 2022-05-25 | 2.47 | 2.56 | 2.40 | 2.2 | 0.007 | 0.87 | 0.0 | 0.05 | 18.66 | 0.01 | 1.973 | 9.47 | 5.45 | 2.8 | 97.2 | 0.0 | -0.23 | 0.87 | 0.87 | 3.85 | 2.2 | 0.003 | 0.53 | 0.0 | 0.04 | 18.24 | 0.00 | 2.078 | 7.95 | 2.61 | 1.9 | 98.1 | 0.0 | 0.73 | 0.36 | 0.88 | 0.88 | 3.66 | 4349 | 541 | 1 | 0 | 2 | 38 | 0 | logfile |
✔ | 8DC2 | 27320 | 2024-03-11 | 2022-06-15 | 2.99 | 2.48 | 3.03 | 3.1 | 0.003 | 0.54 | 0.0 | 0.04 | 19.79 | 0.00 | 2.216 | 11.65 | 0.16 | 3.0 | 97.0 | 0.0 | 1.17 | 0.82 | 0.83 | 2.49 | 3.0 | 0.004 | 0.64 | 0.0 | 0.04 | 20.97 | 0.00 | 2.113 | 12.09 | 2.25 | 3.9 | 96.1 | 0.0 | 0.68 | 0.37 | 0.83 | 0.85 | 2.73 | 7296 | 673 | 4 | 87 | 0 | 0 | 0 | logfile |
✔ | 7Vo0 | 32048 | 2024-03-11 | 2021-10-12 | 3.4 | 3.66 | 3.41 | 3.5 | 0.004 | 0.57 | 0.0 | 0.04 | 21.17 | 0.00 | 1.938 | 7.44 | 0.17 | 1.8 | 98.2 | 0.0 | 0.39 | 0.73 | 0.66 | 1.10 | 3.5 | 0.006 | 0.64 | 0.0 | 0.04 | 23.11 | 0.00 | 1.855 | 12.29 | 3.57 | 2.8 | 97.2 | 0.0 | 0.95 | 1.38 | 0.84 | 0.83 | 1.45 | 7661 | 786 | 14 | 86 | 18 | 0 | 0 | logfile |
✔ | 7C8K | 30306 | 2024-03-14 | 2020-06-02 | 3.2 | 3.18 | — | 3.1 | 0.002 | 0.51 | 0.0 | 0.05 | 13.49 | 0.00 | 2.001 | 4.88 | 0.00 | 3.2 | 96.8 | 0.0 | -1.52 | 0.82 | 0.78 | 2.09 | 3.2 | 0.003 | 0.56 | 0.0 | 0.04 | 15.32 | 0.00 | 2.109 | 7.85 | 0.80 | 4.5 | 95.5 | 0.0 | 1.45 | 1.13 | 0.85 | 0.84 | 3.05 | 4853 | 596 | 3 | 0 | 6 | 0 | 0 | logfile |
✔ | 7RYC | 24733 | 2024-03-11 | 2021-08-24 | 2.9 | 2.34 | — | 3.0 | 0.006 | 0.86 | 0.0 | 0.05 | 13.76 | 0.00 | 2.198 | 5.49 | 0.38 | 4.9 | 95.1 | 0.0 | -2.98 | 0.80 | 0.77 | 2.64 | 3.0 | 0.003 | 0.61 | 0.0 | 0.04 | 15.80 | 0.00 | 2.196 | 3.74 | 2.25 | 2.7 | 97.3 | 0.0 | -0.08 | 0.45 | 0.81 | 0.80 | 2.43 | 8277 | 1125 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 7VVM | 32144 | 2024-03-11 | 2021-11-06 | 3.2 | 2.40 | 3.19 | 3.2 | 0.015 | 1.76 | 0.0 | 0.09 | 13.51 | 0.00 | 2.200 | 6.43 | 0.60 | 5.2 | 94.8 | 0.0 | -1.17 | 0.60 | 0.71 | 2.55 | 3.2 | 0.003 | 0.54 | 0.0 | 0.04 | 16.06 | 0.00 | 2.116 | 8.61 | 2.98 | 3.3 | 96.7 | 0.0 | 0.71 | 0.55 | 0.65 | 0.72 | 2.25 | 8507 | 1133 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NKA | 12435 | 2024-03-20 | 2021-02-17 | 4.07 | 4.20 | — | 4.1 | 0.004 | 0.67 | 0.0 | 0.04 | 14.26 | 0.00 | 1.908 | 8.61 | 0.00 | 4.0 | 96.0 | 0.0 | -0.66 | 0.63 | 0.51 | — | 4.1 | 0.004 | 0.67 | 0.0 | 0.04 | 14.98 | 0.00 | 1.880 | 14.50 | 0.00 | 6.0 | 94.0 | 0.0 | -0.48 | 1.92 | 0.74 | 0.70 | — | 28778 | 1796 | 6 | 23 | 0 | 0 | 13868 | logfile |
✔ | 7CTF | 30463 | 2024-03-16 | 2020-08-18 | 4.8 | 4.92 | — | 4.8 | 0.009 | 1.36 | 0.0 | 0.06 | 19.00 | 0.01 | 2.264 | 6.48 | 8.84 | 6.9 | 93.1 | 0.1 | -4.50 | 0.77 | 0.73 | — | 4.7 | 0.003 | 0.78 | 0.0 | 0.04 | 14.56 | 0.00 | 2.090 | 17.27 | 0.12 | 6.3 | 93.7 | 0.0 | -0.83 | 3.95 | 0.79 | 0.78 | — | 14504 | 1775 | 7 | 0 | 2 | 0 | 0 | logfile |
✔ | 6UJA | 20794 | 2024-03-11 | 2019-10-02 | 3.3 | 3.49 | — | 3.4 | 0.014 | 1.49 | 0.0 | 0.09 | 11.59 | 0.01 | 1.802 | 0.19 | 0.14 | 2.7 | 97.1 | 0.2 | 0.28 | 0.82 | 0.82 | 3.35 | 3.4 | 0.004 | 0.64 | 0.0 | 0.05 | 13.59 | 0.00 | 1.957 | 6.58 | 2.08 | 3.7 | 96.3 | 0.0 | 0.08 | 1.48 | 0.83 | 0.85 | 2.97 | 8224 | 1128 | 10 | 0 | 23 | 0 | 0 | logfile |
✔ | 6W5C | 21541 | 2024-03-15 | 2020-03-13 | 2.9 | 2.92 | — | 3.2 | 0.004 | 0.64 | 0.0 | 0.04 | 18.52 | 0.00 | 2.103 | 8.53 | 0.85 | 7.4 | 92.4 | 0.2 | -1.44 | 0.84 | 0.82 | 4.35 | 3.2 | 0.004 | 0.60 | 0.0 | 0.04 | 19.96 | 0.00 | 2.032 | 10.98 | 1.70 | 8.1 | 91.9 | 0.0 | -0.25 | 2.18 | 0.83 | 0.83 | 3.75 | 10183 | 1023 | 5 | 105 | 0 | 0 | 0 | logfile |
✔ | 6PZB | 20533 | 2024-03-11 | 2019-07-31 | 4.55 | 4.69 | — | 4.5 | 0.009 | 1.24 | 0.0 | 0.06 | 8.37 | 0.01 | 2.231 | 3.11 | 0.00 | 5.9 | 94.1 | 0.0 | -3.87 | 0.62 | 0.76 | — | 4.5 | 0.004 | 0.69 | 0.0 | 0.04 | 8.79 | 0.00 | 1.993 | 7.50 | 0.00 | 7.2 | 92.8 | 0.0 | 0.89 | 0.61 | 0.64 | 0.78 | — | 7747 | 1357 | 1 | 0 | 0 | 0 | 0 | logfile |