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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7Q3L | 13793 | 2023-08-16 | 2021-10-28 | 2.21 | 2.93 | 2.31 | 2.6 | 0.008 | 1.50 | 26.0 | 0.12 | 15.22 | 0.01 | 1.876 | 2.99 | 2.50 | 3.2 | 96.8 | 0.0 | -1.25 | 0.81 | 0.86 | 3.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20470 | 2440 | 16 | 41 | 4 | 180 | 0 | logfile |
✔ | 7WoN | 32652 | 2023-08-09 | 2022-01-22 | 3.9 | 4.07 | — | 4.0 | 0.006 | 0.98 | 0.0 | 0.06 | 14.56 | 0.01 | 2.035 | 5.41 | 0.28 | 9.8 | 90.2 | 0.0 | -4.42 | 0.67 | 0.83 | 2.49 | 4.0 | 0.004 | 0.71 | 0.0 | 0.04 | 16.23 | 0.00 | 2.133 | 11.91 | 0.28 | 10.0 | 90.0 | 0.0 | -3.09 | 0.99 | 0.67 | 0.83 | 2.57 | 3318 | 425 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8FEL | 29032 | 2023-08-11 | 2022-12-06 | 4.64 | 5.02 | 4.40 | 4.5 | 0.001 | 0.35 | 0.0 | 0.04 | 14.88 | 0.00 | 2.191 | 6.97 | 1.98 | 3.8 | 96.2 | 0.0 | -0.24 | 0.70 | 0.37 | — | 4.2 | 0.002 | 0.55 | 0.0 | 0.04 | 12.77 | 0.00 | 2.288 | 10.75 | 0.00 | 3.8 | 96.2 | 0.0 | 0.13 | 1.69 | 0.74 | 0.45 | — | 9201 | 1191 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PCQ | 20304 | 2023-08-17 | 2019-06-18 | 2.6 | 3.06 | — | 2.9 | 0.008 | 0.46 | 0.0 | 0.02 | 12.76 | 0.03 | 1.976 | 3.10 | 1.84 | 6.8 | 93.2 | 0.0 | -4.00 | 0.66 | 0.84 | 4.35 | 2.9 | 0.006 | 0.73 | 0.0 | 0.04 | 15.08 | 0.01 | 2.032 | 9.59 | 3.95 | 7.7 | 92.1 | 0.2 | -1.58 | 1.72 | 0.67 | 0.86 | 3.88 | 72125 | 963 | 8 | 3015 | 1 | 0 | 0 | logfile |
✔ | 7UJA | 26562 | 2023-08-16 | 2022-03-30 | 3.7 | 3.48 | 3.68 | 3.8 | 0.003 | 0.58 | 0.0 | 0.04 | 15.00 | 0.00 | 2.114 | 7.74 | 0.13 | 5.6 | 94.4 | 0.0 | -2.29 | 0.69 | 0.82 | 2.28 | 3.7 | 0.003 | 0.64 | 0.0 | 0.04 | 15.97 | 0.00 | 2.174 | 8.74 | 0.43 | 6.7 | 93.3 | 0.0 | -1.77 | 0.32 | 0.69 | 0.82 | 1.91 | 20748 | 2694 | 21 | 0 | 3 | 0 | 0 | logfile |
✔ | 8i0Q | 35106 | 2023-08-10 | 2023-01-11 | 4.45 | 4.83 | 5.07 | 4.4 | 0.003 | 0.59 | 0.0 | 0.04 | 12.56 | 0.00 | 2.167 | 9.44 | 0.00 | 5.1 | 94.9 | 0.0 | -1.41 | 0.82 | 0.81 | — | 4.4 | 0.002 | 0.59 | 0.0 | 0.04 | 13.14 | 0.00 | 2.202 | 8.97 | 0.00 | 4.9 | 95.1 | 0.0 | -0.72 | 0.47 | 0.82 | 0.82 | — | 8842 | 1192 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 6BUZ | 7293 | 2023-08-12 | 2017-12-11 | 3.92 | 4.51 | — | 4.2 | 0.008 | 0.88 | 0.0 | 0.05 | 27.46 | 0.01 | 2.308 | 8.08 | 0.00 | 5.6 | 94.4 | 0.0 | -5.03 | 0.85 | 0.86 | 3.06 | 4.2 | 0.005 | 0.79 | 0.0 | 0.04 | 28.79 | 0.00 | 2.047 | 22.68 | 0.82 | 7.2 | 92.8 | 0.0 | -0.15 | 1.30 | 0.85 | 0.86 | 1.64 | 12509 | 878 | 11 | 290 | 0 | 0 | 0 | logfile |
✔ | 7L85 | 23222 | 2023-08-16 | 2020-12-31 | 2.9 | 3.14 | 2.89 | 3.1 | 0.025 | 1.68 | 0.0 | 0.10 | 9.89 | 0.01 | 2.365 | 2.39 | 0.00 | 2.3 | 97.7 | 0.0 | 0.88 | 0.81 | 0.89 | 4.84 | 3.1 | 0.005 | 0.61 | 0.0 | 0.05 | 15.79 | 0.01 | 2.156 | 7.44 | 1.12 | 3.2 | 96.8 | 0.0 | 0.92 | 1.29 | 0.76 | 0.90 | 3.92 | 20556 | 2664 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Z6o | 11101 | 2023-08-19 | 2020-05-28 | 3.8 | 4.70 | — | 4.2 | 0.006 | 0.92 | 0.0 | 0.05 | 15.43 | 0.01 | 2.104 | 8.05 | 0.96 | 7.9 | 92.1 | 0.0 | -3.37 | 0.84 | 0.81 | 0.94 | 4.2 | 0.003 | 0.68 | 0.0 | 0.04 | 16.45 | 0.00 | 1.974 | 16.06 | 0.27 | 7.1 | 92.9 | 0.0 | -0.37 | 0.54 | 0.85 | 0.81 | 0.91 | 77516 | 9628 | 24 | 0 | 8 | 0 | 0 | logfile |
✔ | 7XoL | 33351 | 2023-08-09 | 2022-05-01 | 3.26 | 4.02 | 3.37 | 3.4 | 0.002 | 0.49 | 0.0 | 0.04 | 13.50 | 0.00 | 2.224 | 10.95 | 0.00 | 0.5 | 99.5 | 0.0 | 2.40 | 0.89 | 0.88 | 1.73 | 3.4 | 0.003 | 0.56 | 0.0 | 0.04 | 14.73 | 0.00 | 2.100 | 12.34 | 0.11 | 1.1 | 98.9 | 0.0 | 2.20 | 0.25 | 0.90 | 0.90 | 1.60 | 53970 | 7336 | 14 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WP0 | 32665 | 2023-08-09 | 2022-01-22 | 3.71 | 3.94 | — | 3.9 | 0.007 | 0.94 | 0.0 | 0.06 | 14.49 | 0.01 | 2.281 | 5.81 | 0.59 | 8.5 | 91.5 | 0.0 | -4.57 | 0.65 | 0.80 | 3.41 | 3.9 | 0.003 | 0.66 | 0.0 | 0.04 | 15.95 | 0.00 | 2.286 | 10.65 | 0.00 | 8.0 | 92.0 | 0.0 | -1.94 | 0.56 | 0.64 | 0.79 | 2.56 | 3174 | 407 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 7XKT | 33270 | 2023-08-24 | 2022-04-20 | 2.2 | 2.42 | 2.32 | 2.4 | 0.029 | 1.85 | 0.0 | 0.12 | 18.94 | 0.01 | 2.223 | 2.63 | 1.33 | 1.2 | 98.8 | 0.0 | 1.53 | 0.59 | 0.82 | 4.13 | 2.4 | 0.002 | 0.57 | 0.0 | 0.04 | 16.83 | 0.00 | 2.157 | 3.24 | 0.22 | 2.5 | 97.5 | 0.0 | 4.54 | 1.26 | 0.56 | 0.81 | 4.01 | 34488 | 1992 | 36 | 0 | 108 | 444 | 16008 | logfile |
✔ | 7PK6 | 13466 | 2023-08-14 | 2021-08-25 | 2.15 | 2.27 | 2.23 | 2.3 | 0.005 | 0.60 | 0.0 | 0.05 | 17.06 | 0.01 | 1.864 | 4.25 | 2.22 | 2.0 | 98.0 | 0.0 | 1.43 | 0.73 | 0.77 | 4.80 | 2.2 | 0.003 | 0.55 | 0.0 | 0.04 | 17.46 | 0.00 | 2.152 | 6.42 | 2.12 | 2.2 | 97.8 | 0.0 | 1.53 | 0.87 | 0.78 | 0.88 | 4.85 | 120580 | 15100 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XUM | 33474 | 2023-08-09 | 2022-05-19 | 3.8 | 3.49 | 3.48 | 3.7 | 0.002 | 0.57 | 0.0 | 0.04 | 13.82 | 0.00 | 1.938 | 6.52 | 0.00 | 3.7 | 96.3 | 0.0 | -0.15 | 0.56 | 0.76 | 1.43 | 3.7 | 0.003 | 0.60 | 0.0 | 0.04 | 15.91 | 0.00 | 2.119 | 9.07 | 0.44 | 4.1 | 95.9 | 0.0 | 0.17 | 0.35 | 0.57 | 0.76 | 0.69 | 6155 | 816 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 8D7E | 27228 | 2023-08-13 | 2022-06-07 | 2.93 | 3.17 | 2.98 | 3.1 | 0.002 | 0.49 | 0.0 | 0.04 | 12.14 | 0.00 | 2.257 | 5.40 | 0.70 | 2.9 | 97.1 | 0.0 | -2.25 | 0.67 | 0.81 | 3.32 | 3.1 | 0.003 | 0.60 | 0.0 | 0.04 | 16.05 | 0.00 | 2.244 | 5.80 | 4.60 | 3.7 | 96.3 | 0.0 | 0.15 | 1.58 | 0.66 | 0.85 | 3.34 | 8959 | 1143 | 9 | 0 | 8 | 0 | 0 | logfile |
✔ | 8E14 | 27823 | 2023-08-12 | 2022-08-09 | 3.36 | 4.87 | 3.36 | 3.5 | 0.007 | 1.12 | 1.0 | 0.08 | 24.71 | 0.01 | 2.182 | 16.48 | 0.41 | 17.7 | 82.3 | 0.0 | -2.84 | 0.92 | 0.86 | 0.70 | 3.5 | 0.003 | 0.70 | 0.0 | 0.04 | 24.61 | 0.00 | 2.177 | 15.59 | 0.31 | 17.1 | 82.9 | 0.0 | -2.52 | 0.32 | 0.92 | 0.86 | 0.85 | 12442 | 1161 | 16 | 160 | 2 | 0 | 0 | logfile |
✔ | 7WS4 | 32743 | 2023-08-19 | 2022-01-28 | 3.7 | 4.11 | — | 3.9 | 0.004 | 0.62 | 0.0 | 0.05 | 13.41 | 0.00 | 2.110 | 9.30 | 0.00 | 3.5 | 96.5 | 0.0 | 0.09 | 0.83 | 0.85 | 2.54 | 3.9 | 0.007 | 0.69 | 0.0 | 0.05 | 14.93 | 0.00 | 2.105 | 10.56 | 0.31 | 4.4 | 95.6 | 0.0 | -0.12 | 0.34 | 0.84 | 0.87 | 2.50 | 26566 | 3327 | 22 | 0 | 38 | 0 | 0 | logfile |
✔ | 7ZKB | 14761 | 2023-08-11 | 2022-04-12 | 4.7 | 4.80 | 4.47 | 4.7 | 0.013 | 1.10 | 2.0 | 0.06 | 14.01 | 0.00 | 2.224 | 16.22 | 0.21 | 6.9 | 93.1 | 0.0 | 0.07 | 0.56 | 0.74 | — | 4.7 | 0.003 | 0.71 | 0.0 | 0.04 | 14.48 | 0.00 | 2.134 | 14.95 | 0.00 | 6.4 | 93.6 | 0.0 | -0.02 | 0.55 | 0.56 | 0.76 | — | 9043 | 1158 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6PC6 | 20297 | 2023-08-17 | 2019-06-16 | 2.5 | 3.08 | — | 2.9 | 0.008 | 0.56 | 0.0 | 0.02 | 13.08 | 0.03 | 1.930 | 2.91 | 2.11 | 6.3 | 93.7 | 0.0 | -3.58 | 0.73 | 0.88 | 4.50 | 2.9 | 0.005 | 0.67 | 0.0 | 0.03 | 14.86 | 0.01 | 1.949 | 7.94 | 3.68 | 6.6 | 93.2 | 0.2 | -0.81 | 0.91 | 0.74 | 0.90 | 4.30 | 72127 | 963 | 8 | 3015 | 1 | 0 | 0 | logfile |
✔ | 8CKZ | 16707 | 2023-08-13 | 2023-02-16 | 3.07 | 3.27 | 3.09 | 3.2 | 0.005 | 0.90 | 0.0 | 0.05 | 12.35 | 0.01 | 1.966 | 3.43 | 0.00 | 1.1 | 98.9 | 0.0 | -1.16 | 0.50 | 0.80 | 4.33 | 3.2 | 0.003 | 0.60 | 0.0 | 0.04 | 16.14 | 0.00 | 2.066 | 8.92 | 0.34 | 1.0 | 99.0 | 0.0 | 1.65 | 1.10 | 0.52 | 0.82 | 3.89 | 13910 | 1800 | 15 | 0 | 0 | 0 | 0 | logfile |