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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7A6A | 11668 | 2022-04-07 | 2020-08-25 | 1.15 | 1.13 | — | 1.2 | 0.018 | 1.70 | 24.0 | 0.16 | 14.68 | 0.01 | 1.857 | 3.78 | 3.03 | 1.2 | 98.8 | 0.0 | 2.45 | 0.47 | 0.61 | 9.02 | 1.2 | 0.003 | 0.57 | 0.0 | 0.04 | 15.15 | 0.00 | 2.188 | 2.37 | 1.82 | 1.8 | 98.2 | 0.0 | 4.61 | 0.45 | 0.69 | 0.82 | 8.90 | 41613 | 4152 | 72 | 0 | 32 | 4621 | 0 | logfile |
✘ | 7A4M | 11638 | 2022-04-14 | 2020-08-20 | 1.22 | 1.13 | 1.28 | 1.2 | 0.010 | 1.38 | 0.0 | 0.09 | 13.82 | 0.01 | 0.001 | 2.76 | 1.18 | 1.8 | 98.2 | 0.0 | 2.86 | 0.40 | 0.57 | 8.59 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 76248 | 4128 | 24 | 0 | 48 | 2640 | 36216 | logfile |
✔ | 7RRP | 24665 | 2022-04-06 | 2021-08-10 | 1.27 | 1.32 | — | 1.4 | 0.003 | 0.61 | 0.0 | 0.04 | 14.22 | 0.00 | 2.007 | 2.86 | 0.00 | 2.4 | 97.6 | 0.0 | 4.01 | 0.63 | 0.76 | 9.05 | 1.4 | 0.004 | 0.72 | 0.0 | 0.04 | 14.38 | 0.01 | 2.040 | 1.87 | 0.00 | 1.8 | 98.2 | 0.0 | 3.84 | 0.41 | 0.70 | 0.83 | 9.05 | 72254 | 4128 | 72 | 0 | 278 | 2496 | 34080 | logfile |
✔ | 7A6B | 11669 | 2022-04-07 | 2020-08-25 | 1.33 | 1.21 | — | 1.3 | 0.015 | 1.60 | 24.0 | 0.12 | 15.34 | 0.01 | 1.893 | 4.97 | 4.17 | 1.2 | 98.8 | 0.0 | 2.52 | 0.52 | 0.65 | 9.13 | 1.3 | 0.003 | 0.72 | 0.0 | 0.04 | 14.99 | 0.01 | 2.129 | 3.72 | 1.79 | 1.8 | 98.2 | 0.0 | 4.24 | 0.42 | 0.76 | 0.86 | 9.05 | 41494 | 4152 | 72 | 0 | 32 | 3854 | 0 | logfile |
✔ | 7K3V | 22657 | 2022-04-08 | 2020-09-14 | 1.34 | 1.44 | — | 1.4 | 0.005 | 0.79 | 0.0 | 0.04 | 14.68 | 0.00 | 0.211 | 2.71 | 0.00 | 1.2 | 98.8 | 0.0 | 3.60 | 0.69 | 0.78 | 8.90 | 1.4 | 0.005 | 0.76 | 0.0 | 0.04 | 14.89 | 0.01 | 1.975 | 1.80 | 0.00 | 1.2 | 98.8 | 0.0 | 3.84 | 0.31 | 0.73 | 0.83 | 8.91 | 38406 | 4128 | 72 | 0 | 334 | 2672 | 0 | logfile |
✔ | 7K3W | 22658 | 2022-04-09 | 2020-09-14 | 1.36 | 1.48 | — | 1.5 | 0.005 | 0.76 | 0.0 | 0.04 | 14.50 | 0.00 | 1.934 | 3.30 | 0.00 | 1.8 | 98.2 | 0.0 | 3.35 | 0.73 | 0.80 | 9.05 | 1.5 | 0.003 | 0.65 | 0.0 | 0.04 | 14.77 | 0.00 | 2.038 | 2.63 | 0.00 | 1.8 | 98.2 | 0.0 | 4.21 | 0.17 | 0.75 | 0.82 | 9.20 | 39086 | 4128 | 72 | 0 | 382 | 2680 | 0 | logfile |
✔ | 6Z9F | 11122 | 2022-04-07 | 2020-06-03 | 1.56 | 1.61 | 1.61 | 1.6 | 0.015 | 1.74 | 48.0 | 0.10 | 15.51 | 0.01 | 1.782 | 5.46 | 3.66 | 1.7 | 98.3 | 0.0 | 2.70 | 0.68 | 0.69 | 8.63 | 1.6 | 0.002 | 0.57 | 0.0 | 0.04 | 15.00 | 0.00 | 2.179 | 4.97 | 3.05 | 1.8 | 98.2 | 0.0 | 4.97 | 0.98 | 0.84 | 0.85 | 8.54 | 41020 | 4152 | 72 | 0 | 32 | 4172 | 0 | logfile |
✔ | 7KoD | 22972 | 2022-04-06 | 2020-11-08 | 1.655 | 2.30 | — | 1.9 | 0.001 | 0.33 | 0.0 | 0.03 | 8.49 | 0.00 | 2.288 | 0.80 | 0.00 | 1.1 | 98.9 | 0.0 | 6.14 | 0.91 | 0.91 | 8.16 | 2.0 | 0.005 | 0.49 | 0.0 | 0.04 | 13.81 | 0.00 | 1.858 | 2.53 | 0.27 | 0.6 | 99.4 | 0.0 | 5.26 | 0.58 | 0.88 | 0.94 | 8.02 | 68186 | 4128 | 48 | 0 | 0 | 1727 | 32643 | logfile |
✘ | 7A5V | 11657 | 2022-04-06 | 2020-08-22 | 1.7 | 1.73 | 1.69 | 1.8 | 0.014 | 1.59 | 0.0 | 0.09 | 13.54 | 0.02 | 0.000 | 2.35 | 0.48 | 2.2 | 97.8 | 0.0 | -0.05 | 0.61 | 0.79 | 6.90 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21155 | 2275 | 30 | 0 | 85 | 1015 | 0 | logfile |
✘ | 7EFC | 31083 | 2022-04-06 | 2021-03-21 | 1.7 | 1.76 | 1.83 | 1.9 | 0.032 | 3.16 | 80.0 | 0.09 | 15.03 | 0.02 | 0.000 | 3.39 | 2.15 | 2.5 | 96.6 | 0.8 | -0.84 | 0.73 | 0.80 | 6.33 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20020 | 2400 | 20 | 0 | 20 | 780 | 0 | logfile |
✘ | 7EFD | 31084 | 2022-04-06 | 2021-03-21 | 1.77 | 1.79 | 1.83 | 1.9 | 0.033 | 3.16 | 60.0 | 0.09 | 15.47 | 0.02 | 0.000 | 2.38 | 2.15 | 1.7 | 97.5 | 0.8 | -0.54 | 0.71 | 0.78 | 5.66 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20020 | 2400 | 20 | 0 | 20 | 780 | 0 | logfile |
✔ | 5K12 | 8194 | 2022-04-05 | 2016-05-17 | 1.8 | 2.40 | — | 2.8 | 0.008 | 0.97 | 0.0 | 0.06 | 10.27 | 0.01 | 2.051 | 19.79 | 0.82 | 3.8 | 96.2 | 0.0 | -2.53 | 0.66 | 0.74 | 5.80 | 2.8 | 0.010 | 1.13 | 2.0 | 0.04 | 15.20 | 0.00 | 1.443 | 13.32 | 0.20 | 1.8 | 98.2 | 0.0 | 1.71 | 1.05 | 0.71 | 0.89 | 3.78 | 14856 | 1764 | 12 | 0 | 0 | 1086 | 0 | logfile |
✔ | 6S61 | 10101 | 2022-04-06 | 2019-07-02 | 1.84 | 1.89 | 1.85 | 1.9 | 0.011 | 1.36 | 0.0 | 0.06 | 12.21 | 0.01 | 0.312 | 2.62 | 1.29 | 1.8 | 98.2 | 0.0 | 3.69 | 0.77 | 0.86 | 8.46 | 1.9 | 0.003 | 0.57 | 0.0 | 0.03 | 14.82 | 0.00 | 1.798 | 5.19 | 0.65 | 1.8 | 98.2 | 0.0 | 4.54 | 0.74 | 0.79 | 0.89 | 8.65 | 71060 | 4128 | 72 | 0 | 30 | 3854 | 32904 | logfile |
✔ | 7QKY | 14057 | 2022-04-04 | 2021-12-19 | 1.86 | 2.10 | 1.91 | 2.0 | 0.011 | 1.75 | 3.0 | 0.09 | 12.76 | 0.01 | 2.522 | 1.04 | 0.61 | 4.7 | 95.3 | 0.0 | -3.08 | 0.33 | 0.75 | 8.32 | 2.0 | 0.003 | 0.69 | 0.0 | 0.05 | 16.56 | 0.00 | 2.218 | 4.85 | 0.61 | 6.2 | 93.8 | 0.0 | -3.18 | 1.00 | 0.40 | 0.84 | 7.35 | 5760 | 396 | 6 | 0 | 0 | 0 | 2862 | logfile |
✔ | 7o6Q | 12740 | 2022-04-04 | 2021-04-12 | 1.88 | 2.21 | — | 1.9 | 0.010 | 0.71 | 0.0 | 0.05 | 12.80 | 0.01 | 2.115 | 4.83 | 1.25 | 3.2 | 96.8 | 0.0 | -1.61 | 0.88 | 0.85 | 7.59 | 1.9 | 0.002 | 0.47 | 0.0 | 0.04 | 14.46 | 0.00 | 2.188 | 5.16 | 1.63 | 0.8 | 99.2 | 0.0 | 3.35 | 0.36 | 0.90 | 0.90 | 6.06 | 7999 | 997 | 8 | 0 | 0 | 399 | 0 | logfile |
✔ | 6CVM | 7770 | 2022-04-08 | 2018-03-28 | 1.9 | 2.49 | 1.94 | 2.3 | 0.012 | 0.92 | 0.0 | 0.07 | 10.17 | 0.01 | 2.053 | 3.57 | 0.00 | 2.7 | 97.3 | 0.0 | -1.16 | 0.81 | 0.91 | 7.66 | 2.3 | 0.005 | 0.63 | 0.0 | 0.05 | 13.84 | 0.00 | 1.973 | 6.50 | 0.69 | 2.2 | 97.8 | 0.0 | 0.70 | 0.37 | 0.85 | 0.94 | 6.94 | 37062 | 4084 | 12 | 0 | 20 | 4194 | 0 | logfile |
✘ | 6SAE | 10129 | 2022-04-10 | 2019-07-16 | 1.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 164640 | 18360 | 480 | 360 | 600 | 11040 | 0 | logfile |
✔ | 7P6A | 13223 | 2022-04-04 | 2021-07-15 | 1.9 | 1.91 | 1.88 | 1.9 | 0.004 | 0.72 | 0.0 | 0.06 | 12.30 | 0.01 | 2.247 | 3.33 | 0.00 | 3.8 | 96.2 | 0.0 | -3.07 | 0.51 | 0.86 | 7.13 | 1.9 | 0.003 | 0.65 | 0.0 | 0.05 | 14.09 | 0.00 | 2.291 | 4.28 | 0.00 | 4.7 | 95.3 | 0.0 | -2.61 | 0.82 | 0.55 | 0.89 | 7.80 | 4166 | 540 | 10 | 0 | 0 | 76 | 0 | logfile |
✔ | 6ZGL | 11210 | 2022-04-05 | 2020-06-19 | 1.9 | 1.87 | — | 1.9 | 0.013 | 1.55 | 0.0 | 0.12 | 15.52 | 0.01 | 2.196 | 9.00 | 3.73 | 1.1 | 98.9 | 0.0 | 0.13 | 0.73 | 0.83 | 7.03 | 1.9 | 0.003 | 0.56 | 0.0 | 0.04 | 15.75 | 0.00 | 2.118 | 4.55 | 1.00 | 0.6 | 99.4 | 0.0 | 3.59 | 0.75 | 0.76 | 0.83 | 7.07 | 15760 | 1848 | 24 | 0 | 0 | 964 | 0 | logfile |
✔ | 7QK5 | 14038 | 2022-04-05 | 2021-12-17 | 1.92 | 1.67 | 1.83 | 2.2 | 0.011 | 1.89 | 4.0 | 0.10 | 10.96 | 0.01 | 2.401 | 0.10 | 0.00 | 4.5 | 95.5 | 0.0 | -1.58 | 0.32 | 0.78 | 6.85 | 2.2 | 0.004 | 0.64 | 0.0 | 0.05 | 18.34 | 0.01 | 2.238 | 4.01 | 2.74 | 3.7 | 96.3 | 0.0 | -1.87 | 1.49 | 0.36 | 0.83 | 7.41 | 10485 | 666 | 18 | 0 | 36 | 0 | 5337 | logfile |