Table showing results for May 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	6ZZX	11588	2022-05-13	2020-08-05	2.7	2.80	2.77	2.8	0.024	2.65	0.0	0.12	20.92	0.01	1.178	15.63	0.00	6.0	93.8	0.2	0.75	0.75	0.88	3.89	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	56369	4684	68	0	403	99	0	logfile
✘	7CUW	30475	2022-05-13	2020-08-25	2.63	2.93	—	2.8	0.010	0.93	0.0	0.05	15.56	0.02	1.241	3.73	5.84	3.8	96.0	0.3	-4.15	0.71	0.89	4.53	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9839	1199	6	0	9	0	0	logfile
✘	7RH5	24455	2022-05-18	2021-07-16	3.0	3.17	—	3.2	0.011	2.12	1.0	0.05	16.66	0.01	1.180	16.90	0.11	7.7	92.0	0.2	-0.68	0.70	0.81	3.62	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	48948	6072	43	0	68	0	0	logfile
✘	7K5C	22680	2022-05-17	2020-09-16	2.7	2.91	—	2.9	0.004	0.53	0.0	0.04	14.17	0.00	2.201	4.90	0.00	3.2	96.8	0.0	1.14	0.71	0.85	3.23	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	41547	5268	24	0	0	219	0	logfile
✘	7BKB	12206	2022-05-13	2021-01-15	3.5	3.74	—	3.7	0.012	1.14	48.0	0.10	15.35	0.01	1.954	10.89	3.80	7.7	92.1	0.2	-1.67	0.53	0.64	0.59	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	64126	8220	44	0	68	0	0	logfile
✘	7NYU	12654	2022-05-17	2021-03-23	3.8	3.88	4.17	3.9	0.005	0.86	0.0	0.05	13.98	0.01	2.097	4.73	0.82	3.3	96.7	0.0	-1.67	0.52	0.59	0.84	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	35228	4618	18	0	11	0	0	logfile
✘	7DEG	30657	2022-05-13	2020-11-04	3.4	3.53	—	3.5	0.018	1.47	0.0	0.07	17.32	0.03	1.203	26.71	1.10	16.6	83.0	0.4	-6.17	0.71	0.85	2.45	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	12852	1520	12	0	18	0	0	logfile
✘	6VPV	21320	2022-05-16	2020-02-04	2.7	3.25	—	3.2	0.007	1.04	0.0	0.05	19.21	0.05	1.222	10.40	0.00	4.1	95.9	0.0	-1.73	0.59	0.79	3.68	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	72192	6753	60	0	384	0	0	logfile
✘	7RH7	24457	2022-05-17	2021-07-16	3.0	3.06	—	3.2	0.010	2.04	0.0	0.05	16.57	0.01	1.182	16.48	0.00	7.7	92.1	0.2	-0.61	0.55	0.70	2.84	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	93330	6072	44	0	68	0	44390	logfile
✘	7CXR	30495	2022-05-12	2020-09-02	3.4	3.32	3.43	3.7	0.007	0.87	1.0	0.06	16.56	0.00	2.199	12.99	3.39	6.6	93.1	0.3	-2.27	0.52	0.54	1.33	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	5168	614	2	0	0	0	0	logfile
✘	6ZZY	11589	2022-05-12	2020-08-05	3.16	2.16	—	2.5	0.025	2.67	0.0	0.19	21.02	0.02	1.196	12.90	0.03	6.1	93.7	0.2	-0.33	0.57	0.76	3.32	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	54609	4594	44	0	379	0	0	logfile
✘	7A4P	11640	2022-05-18	2020-08-20	4.2	3.57	4.19	3.6	0.026	2.74	1.0	0.19	21.86	0.01	1.192	24.75	0.03	7.4	92.3	0.3	-0.71	0.60	0.61	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	48636	4086	38	0	337	0	0	logfile
✘	7LWD	23545	2022-05-12	2021-03-01	3.65	3.91	3.58	3.9	0.011	0.97	0.0	0.04	15.22	0.00	2.024	11.24	0.00	6.4	93.6	0.0	-4.15	0.67	0.81	2.29	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6163	769	4	0	3	0	0	logfile
✘	7oUi	13078	2022-05-16	2021-06-11	2.79	3.20	—	3.1	0.017	1.97	0.0	0.06	17.69	0.04	1.216	52.17	1.81	5.1	94.7	0.2	0.45	0.63	0.78	3.07	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	84427	8342	108	0	374	139	0	logfile
✘	7MTP	23993	2022-05-01	2021-05-13	2.79	3.30	—	3.4	0.011	1.20	180.0	0.07	9.77	0.01	1.746	18.64	0.22	2.9	96.9	0.2	-2.75	0.67	0.80	4.53	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	247860	31080	60	0	0	0	0	logfile
✘	7D5K	30583	2022-05-14	2020-09-26	3.5	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	17667	2181	9	0	12	0	0	logfile
✘	7R7U	24305	2022-05-15	2021-06-25	4.3	4.05	—	3.8	0.005	1.09	0.0	0.06	15.33	0.01	2.278	7.12	0.04	8.8	91.2	0.0	-3.72	0.78	0.72	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	25362	3240	6	0	0	0	0	logfile
✘	7LX0	23563	2022-05-15	2021-03-02	2.96	3.12	—	3.0	0.032	3.33	0.0	0.10	19.33	0.02	1.204	15.42	2.03	5.6	94.2	0.1	-3.24	0.82	0.87	3.18	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	72462	6699	60	0	447	0	0	logfile
✘	7CUB	30471	2022-05-13	2020-08-22	2.55	2.79	—	2.7	0.008	0.85	0.0	0.05	14.60	0.01	1.245	4.14	4.63	3.8	95.9	0.3	-3.84	0.73	0.89	4.60	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9842	1199	7	0	9	13	0	logfile
✘	7CUQ	30474	2022-05-13	2020-08-24	2.64	2.91	—	2.9	0.008	0.74	0.0	0.04	13.22	0.01	1.249	4.13	3.42	3.0	96.9	0.1	-4.33	0.50	0.75	4.14	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9834	1199	6	0	9	0	0	logfile

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