The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7UUQ | 26800 | 2023-12-07 | 2022-04-28 | 3.1 | 3.45 | 2.98 | 3.3 | 0.018 | 1.82 | 0.0 | 0.06 | 18.29 | 0.01 | 1.865 | 20.35 | 0.00 | 0.0 | 100.0 | 0.0 | -9.31 | 0.68 | 0.85 | 2.95 | 3.3 | 0.118 | 4.56 | 11.0 | 0.23 | 30.56 | 0.02 | 1.630 | 55.02 | 2.47 | 64.9 | 32.1 | 3.0 | -10.63 | 0.67 | 0.73 | 0.90 | 3.19 | 4760 | 364 | 98 | 0 | 98 | 0 | 0 | logfile |
✔ | 7DA4 | 30622 | 2023-12-07 | 2020-10-14 | 4.24 | 3.75 | — | 4.2 | 0.010 | 1.54 | 0.0 | 0.08 | 17.16 | 0.01 | 2.245 | 79.80 | 0.00 | 50.0 | 50.0 | 0.0 | -8.65 | 0.39 | 0.66 | — | 4.3 | 0.004 | 0.94 | 0.0 | 0.04 | 10.84 | 0.00 | 2.229 | 17.17 | 0.00 | 21.7 | 78.3 | 0.0 | -5.61 | 3.07 | 0.36 | 0.60 | — | 507 | 66 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J2P | 5499 | 2023-12-09 | 2012-11-30 | 3.6 | 3.28 | — | 3.4 | 0.010 | 1.92 | 0.0 | 0.12 | 17.50 | 0.02 | 2.155 | 110.32 | 20.13 | 29.7 | 46.3 | 24.1 | -7.75 | 0.42 | 0.79 | 1.08 | 3.3 | 0.004 | 0.93 | 0.0 | 0.05 | 17.47 | 0.00 | 1.839 | 72.88 | 1.99 | 20.9 | 75.3 | 3.8 | -4.57 | 0.92 | 0.39 | 0.73 | 1.16 | 9890 | 1134 | 8 | 0 | 6 | 0 | 1086 | logfile |
✔ | 7V49 | 31704 | 2023-12-07 | 2021-08-12 | 3.4 | 3.45 | — | 4.1 | 0.007 | 1.01 | 0.0 | 0.06 | 13.70 | 0.00 | 2.279 | 22.06 | 0.00 | 39.7 | 60.3 | 0.0 | -7.67 | 0.33 | 0.73 | 5.03 | 4.1 | 0.003 | 0.73 | 0.0 | 0.05 | 14.81 | 0.00 | 2.500 | 7.22 | 0.00 | 13.2 | 86.8 | 0.0 | -5.75 | 1.27 | 0.31 | 0.69 | 4.86 | 1221 | 180 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DWV | 30887 | 2023-12-07 | 2021-01-18 | 3.07 | 2.95 | — | 3.6 | 0.007 | 0.80 | 0.0 | 0.06 | 14.69 | 0.00 | 2.258 | 16.67 | 0.00 | 26.8 | 73.2 | 0.0 | -7.45 | 0.41 | 0.75 | 4.09 | 4.1 | 0.004 | 0.72 | 0.0 | 0.05 | 17.18 | 0.00 | 2.182 | 17.15 | 1.19 | 22.4 | 77.6 | 0.0 | -6.08 | 1.50 | 0.41 | 0.75 | 2.54 | 2064 | 258 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CYE | 30498 | 2023-12-08 | 2020-09-03 | 3.54 | 3.31 | — | 3.7 | 0.010 | 1.42 | 0.0 | 0.07 | 12.31 | 0.01 | 2.232 | 4.09 | 1.30 | 12.4 | 87.0 | 0.6 | -7.38 | 0.56 | 0.76 | 2.20 | 3.7 | 0.003 | 0.89 | 0.0 | 0.04 | 14.85 | 0.01 | 2.091 | 7.04 | 0.26 | 10.5 | 89.5 | 0.0 | -2.91 | 0.86 | 0.60 | 0.81 | 2.82 | 7263 | 978 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7BSP | 30163 | 2023-12-09 | 2020-03-31 | 4.0 | 4.12 | — | 4.0 | 0.005 | 0.66 | 0.0 | 0.04 | 15.68 | 0.01 | 1.928 | 53.93 | 0.00 | 14.6 | 85.4 | 0.0 | -7.27 | 0.68 | 0.87 | — | 4.0 | 0.003 | 0.76 | 0.0 | 0.04 | 16.10 | 0.00 | 2.181 | 12.43 | 0.08 | 7.1 | 92.9 | 0.0 | -2.47 | 0.64 | 0.68 | 0.86 | — | 11010 | 1352 | 5 | 0 | 5 | 0 | 0 | logfile |
✔ | 3J06 | 5185 | 2023-12-09 | 2011-04-26 | 3.3 | 2.88 | — | 3.5 | 0.011 | 2.34 | 441.0 | 0.15 | 21.41 | 0.01 | 1.607 | 79.64 | 14.71 | 21.1 | 65.4 | 13.5 | -7.24 | 0.56 | 0.80 | 1.90 | 3.0 | 0.004 | 0.92 | 0.0 | 0.04 | 20.79 | 0.01 | 2.088 | 17.33 | 1.28 | 8.8 | 89.8 | 1.5 | -2.84 | 1.27 | 0.55 | 0.79 | 2.18 | 62916 | 7595 | 98 | 147 | 0 | 0 | 0 | logfile |
✔ | 6N1H | 8902 | 2023-12-09 | 2018-11-08 | 3.17 | 3.22 | — | 3.2 | 0.006 | 1.13 | 0.0 | 0.06 | 12.23 | 0.01 | 0.657 | 32.07 | 3.97 | 7.4 | 92.6 | 0.0 | -7.22 | 0.39 | 0.46 | 0.05 | 3.2 | 0.003 | 0.74 | 0.0 | 0.04 | 17.47 | 0.00 | 2.143 | 11.92 | 2.70 | 7.2 | 92.8 | 0.0 | 1.00 | 4.76 | 0.63 | 0.84 | 1.82 | 10991 | 1328 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 8GQY | 34203 | 2023-12-09 | 2022-08-31 | 3.4 | 2.82 | 3.40 | 3.6 | 0.005 | 0.66 | 0.0 | 0.04 | 12.58 | 0.00 | 2.117 | 7.22 | 5.67 | 3.6 | 96.4 | 0.0 | -7.14 | 0.69 | 0.86 | 3.37 | 3.6 | 0.003 | 0.65 | 0.0 | 0.04 | 15.11 | 0.00 | 2.171 | 7.06 | 0.70 | 1.8 | 98.2 | 0.0 | -0.57 | 1.39 | 0.66 | 0.86 | 2.19 | 9515 | 1265 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RJU | 4906 | 2023-12-07 | 2019-04-29 | 3.2 | 4.49 | 2.14 | 10.0 | 0.007 | 0.93 | 0.0 | 0.05 | 15.36 | 0.00 | 2.423 | 4.52 | 0.00 | 11.6 | 88.4 | 0.0 | -7.10 | 0.22 | -0.01 | -0.80 | 3.9 | 0.003 | 0.71 | 0.0 | 0.03 | 16.08 | 0.00 | 2.061 | 8.55 | 1.01 | 6.2 | 93.8 | 0.0 | -1.13 | 1.35 | 0.28 | 0.06 | -0.23 | 1992 | 131 | 1 | 0 | 0 | 0 | 997 | logfile |
✔ | 6HQE | 0252 | 2023-12-08 | 2018-09-24 | 4.4 | 4.34 | — | 4.4 | 0.009 | 1.25 | 0.0 | 0.06 | 9.67 | 0.01 | 2.307 | 6.79 | 0.00 | 4.8 | 95.2 | 0.0 | -7.05 | 0.65 | 0.85 | — | 4.4 | 0.004 | 0.77 | 0.0 | 0.04 | 11.97 | 0.01 | 2.226 | 19.13 | 0.00 | 2.7 | 97.3 | 0.0 | 1.18 | 1.68 | 0.64 | 0.83 | — | 9360 | 1196 | 52 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XQ2 | 33389 | 2023-12-07 | 2022-05-06 | 3.3 | 3.45 | 3.15 | 3.5 | 0.007 | 0.79 | 1.0 | 0.05 | 16.92 | 0.01 | 2.244 | 6.48 | 0.85 | 3.7 | 96.3 | 0.0 | -6.96 | 0.56 | 0.83 | 4.29 | 3.5 | 0.005 | 0.63 | 0.0 | 0.04 | 16.97 | 0.00 | 2.199 | 8.54 | 0.00 | 4.2 | 95.8 | 0.0 | 0.06 | 2.06 | 0.45 | 0.78 | 3.66 | 3377 | 409 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6GGS | 4399 | 2023-12-08 | 2018-05-03 | 3.94 | 3.85 | — | 3.8 | 0.006 | 1.15 | 0.0 | 0.07 | 14.10 | 0.00 | 2.060 | 14.46 | 1.27 | 4.8 | 95.2 | 0.0 | -6.91 | 0.49 | 0.77 | 1.98 | 3.8 | 0.004 | 1.08 | 0.0 | 0.04 | 17.49 | 0.00 | 2.106 | 25.20 | 1.01 | 3.0 | 97.0 | 0.0 | -3.01 | 3.52 | 0.51 | 0.76 | 1.92 | 6880 | 860 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XQ1 | 33388 | 2023-12-07 | 2022-05-06 | 3.4 | 3.32 | 3.36 | 3.5 | 0.010 | 1.05 | 1.0 | 0.06 | 13.48 | 0.01 | 2.320 | 6.82 | 0.58 | 2.8 | 97.2 | 0.0 | -6.81 | 0.47 | 0.78 | 3.56 | 3.5 | 0.003 | 0.60 | 0.0 | 0.04 | 14.48 | 0.00 | 2.151 | 8.34 | 0.00 | 2.5 | 97.5 | 0.0 | 0.80 | 1.19 | 0.52 | 0.82 | 1.77 | 3302 | 400 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6X3F | 22021 | 2023-12-08 | 2020-05-21 | 3.03 | 3.23 | — | 3.3 | 0.006 | 0.93 | 0.0 | 0.06 | 14.72 | 0.01 | 2.351 | 3.78 | 0.00 | 5.0 | 95.0 | 0.0 | -6.78 | 0.58 | 0.85 | 3.24 | 3.3 | 0.003 | 0.61 | 0.0 | 0.04 | 15.78 | 0.00 | 2.282 | 6.67 | 0.10 | 3.6 | 96.4 | 0.0 | -0.25 | 0.95 | 0.53 | 0.84 | 2.06 | 9366 | 1227 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 7XPZ | 33386 | 2023-12-07 | 2022-05-06 | 3.4 | 3.31 | 3.34 | 3.6 | 0.005 | 0.73 | 0.0 | 0.05 | 12.26 | 0.01 | 2.311 | 6.57 | 0.58 | 5.5 | 94.5 | 0.0 | -6.77 | 0.49 | 0.79 | 3.43 | 3.6 | 0.004 | 0.68 | 0.0 | 0.04 | 14.09 | 0.00 | 2.156 | 8.10 | 0.58 | 5.0 | 95.0 | 0.0 | -0.80 | 1.17 | 0.43 | 0.76 | 2.59 | 3227 | 402 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6KiQ | 9997 | 2023-12-10 | 2019-07-19 | 3.62 | 3.66 | — | 3.8 | 0.035 | 3.74 | 145.0 | 0.27 | 19.81 | 0.04 | 2.201 | 12.20 | 14.75 | 18.6 | 70.7 | 10.7 | -6.77 | 0.58 | 0.71 | 1.68 | 3.5 | 0.003 | 0.79 | 0.0 | 0.04 | 17.15 | 0.01 | 2.016 | 12.53 | 0.36 | 12.1 | 87.3 | 0.6 | -2.66 | 1.19 | 0.62 | 0.75 | 1.32 | 15093 | 968 | 3 | 0 | 0 | 0 | 7444 | logfile |
✔ | 6oFH | 20046 | 2023-12-09 | 2019-03-29 | 3.7 | 3.79 | — | 3.8 | 0.008 | 0.75 | 0.0 | 0.05 | 7.71 | 0.01 | 2.097 | 3.74 | 0.00 | 5.3 | 94.7 | 0.0 | -6.76 | 0.59 | 0.83 | 1.69 | 3.8 | 0.004 | 0.69 | 0.0 | 0.04 | 17.12 | 0.00 | 2.115 | 10.05 | 0.40 | 3.5 | 96.5 | 0.0 | 1.97 | 0.84 | 0.60 | 0.84 | 0.81 | 11628 | 1482 | 19 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XQ0 | 33387 | 2023-12-07 | 2022-05-06 | 3.0 | 2.77 | 3.09 | 3.2 | 0.018 | 1.35 | 0.0 | 0.05 | 17.38 | 0.01 | 2.232 | 7.04 | 0.86 | 1.5 | 98.5 | 0.0 | -6.72 | 0.49 | 0.79 | 4.03 | 3.2 | 0.003 | 1.00 | 0.0 | 0.04 | 17.47 | 0.00 | 2.159 | 7.49 | 1.15 | 2.0 | 98.0 | 0.0 | 1.26 | 1.49 | 0.44 | 0.77 | 2.68 | 3320 | 402 | 1 | 0 | 2 | 0 | 0 | logfile |