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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6iTC | 9731 | 2024-03-16 | 2018-11-21 | 3.45 | 3.58 | — | 3.5 | 0.016 | 1.48 | 5.0 | 0.08 | 13.87 | 0.01 | 1.574 | 8.12 | 1.02 | 9.0 | 90.9 | 0.1 | -4.35 | 0.69 | 0.77 | 1.77 | 3.5 | 0.003 | 0.73 | 0.0 | 0.04 | 16.24 | 0.00 | 2.013 | 12.22 | 4.00 | 6.4 | 93.6 | 0.0 | -0.91 | 0.78 | 0.72 | 0.83 | 1.69 | 13844 | 1738 | 9 | 0 | 6 | 0 | 0 | logfile |
✔ | 7JHG | 22336 | 2024-03-16 | 2020-07-20 | 3.47 | 3.69 | — | 3.7 | 0.004 | 0.78 | 0.0 | 0.05 | 10.24 | 0.01 | 1.330 | 4.55 | 0.07 | 3.0 | 97.0 | 0.0 | -3.37 | 0.72 | 0.66 | 1.57 | 3.6 | 0.003 | 0.66 | 0.0 | 0.04 | 15.01 | 0.00 | 2.220 | 11.45 | 2.53 | 3.7 | 96.3 | 0.0 | -0.56 | 1.71 | 0.83 | 0.82 | 2.27 | 13457 | 1699 | 10 | 0 | 6 | 0 | 0 | logfile |
✔ | 6KA4 | 9954 | 2024-03-17 | 2019-06-20 | 3.4 | 3.49 | — | 3.4 | 0.006 | 0.82 | 0.0 | 0.05 | 13.68 | 0.01 | 2.076 | 15.29 | 0.00 | 5.0 | 95.0 | 0.0 | -0.10 | 0.77 | 0.83 | 1.80 | 3.4 | 0.002 | 0.57 | 0.0 | 0.04 | 15.96 | 0.00 | 2.145 | 7.80 | 1.79 | 3.4 | 96.6 | 0.0 | 1.18 | 0.45 | 0.79 | 0.85 | 1.12 | 17500 | 2136 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oH9 | 12897 | 2024-03-16 | 2021-05-09 | 3.0 | 3.38 | — | 3.0 | 0.007 | 0.84 | 0.0 | 0.05 | 25.97 | 0.01 | 2.234 | 5.13 | 0.00 | 2.7 | 97.3 | 0.0 | -0.54 | 0.89 | 0.87 | 2.74 | 3.0 | 0.004 | 0.72 | 0.0 | 0.04 | 26.66 | 0.00 | 2.160 | 12.64 | 2.15 | 3.4 | 96.6 | 0.0 | 1.47 | 1.14 | 0.90 | 0.89 | 2.45 | 15099 | 1144 | 13 | 290 | 0 | 0 | 0 | logfile |
✘ | 7o37 | 12702 | 2024-03-25 | 2021-04-01 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 48610 | 5970 | 52 | 0 | 43 | 0 | 0 | logfile |
✔ | 7JZZ | 22585 | 2024-03-19 | 2020-09-02 | 3.2 | 3.30 | — | 3.3 | 0.010 | 0.98 | 0.0 | 0.05 | 17.23 | 0.01 | 2.209 | 6.01 | 0.61 | 7.1 | 92.9 | 0.0 | -3.65 | 0.81 | 0.86 | 3.19 | 3.3 | 0.002 | 0.57 | 0.0 | 0.04 | 17.99 | 0.00 | 2.126 | 10.35 | 2.00 | 5.4 | 94.6 | 0.0 | -0.15 | 0.45 | 0.79 | 0.85 | 2.51 | 24197 | 2978 | 12 | 61 | 0 | 0 | 0 | logfile |
✔ | 6TJV | 10513 | 2024-03-22 | 2019-11-27 | 3.2 | 3.36 | — | 3.3 | 0.010 | 1.25 | 6.0 | 0.07 | 16.45 | 0.01 | 1.299 | 18.17 | 1.46 | 11.4 | 88.0 | 0.6 | -4.03 | 0.62 | 0.83 | 2.17 | 3.3 | 0.003 | 0.71 | 0.0 | 0.04 | 16.76 | 0.01 | 2.088 | 12.11 | 4.33 | 9.6 | 90.2 | 0.2 | -0.77 | 0.46 | 0.60 | 0.83 | 1.54 | 33838 | 4274 | 26 | 0 | 15 | 1 | 0 | logfile |
✔ | 6NMA | 0445 | 2024-03-15 | 2019-01-10 | 3.38 | 3.71 | — | 3.7 | 0.009 | 0.78 | 0.0 | 0.05 | 15.89 | 0.00 | 1.973 | 10.70 | 8.09 | 11.0 | 89.0 | 0.1 | -4.94 | 0.65 | 0.78 | 2.70 | 3.7 | 0.002 | 0.58 | 0.0 | 0.04 | 17.06 | 0.00 | 2.213 | 7.80 | 3.97 | 7.1 | 92.9 | 0.0 | -1.46 | 0.46 | 0.65 | 0.78 | 1.74 | 12404 | 1435 | 6 | 25 | 2 | 0 | 0 | logfile |
✘ | 6XKU | 22225 | 2024-03-15 | 2020-06-27 | 4.2 | 4.32 | — | 4.2 | 0.009 | 1.00 | 1.0 | 0.07 | 13.80 | 0.01 | 1.987 | 25.66 | 0.16 | 16.5 | 83.2 | 0.4 | -4.29 | 0.75 | 0.73 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13079 | 1678 | 12 | 0 | 8 | 0 | 0 | logfile |
✘ | 6R0Z | 4702 | 2024-03-24 | 2019-03-13 | 3.8 | 3.83 | — | 3.8 | 0.007 | 0.97 | 1.0 | 0.06 | 9.78 | 0.01 | 2.152 | 4.34 | 0.19 | 6.2 | 93.8 | 0.0 | -3.88 | 0.85 | 0.85 | 3.07 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 40184 | 5847 | 27 | 0 | 3 | 0 | 0 | logfile |
✔ | 7A08 | 11601 | 2024-03-16 | 2020-08-07 | 3.11 | 3.18 | — | 3.2 | 0.006 | 0.67 | 0.0 | 0.04 | 26.05 | 0.00 | 1.939 | 10.07 | 0.22 | 5.3 | 94.7 | 0.0 | -2.39 | 0.73 | 0.80 | 3.00 | 3.2 | 0.005 | 0.64 | 0.0 | 0.04 | 26.67 | 0.00 | 2.156 | 8.13 | 2.51 | 3.7 | 96.2 | 0.1 | -0.03 | 0.36 | 0.73 | 0.82 | 2.02 | 13969 | 1070 | 12 | 263 | 1 | 0 | 0 | logfile |
✔ | 7T3J | 25660 | 2024-03-20 | 2021-12-08 | 3.2 | 3.05 | — | 3.2 | 0.004 | 0.74 | 0.0 | 0.05 | 17.15 | 0.01 | 2.241 | 6.11 | 0.58 | 4.9 | 95.1 | 0.0 | -1.91 | 0.87 | 0.81 | 1.94 | 3.2 | 0.002 | 0.54 | 0.0 | 0.04 | 17.31 | 0.00 | 2.171 | 11.50 | 2.11 | 5.2 | 94.8 | 0.0 | 0.19 | 0.31 | 0.88 | 0.83 | 1.87 | 27076 | 3349 | 12 | 61 | 0 | 0 | 0 | logfile |
✘ | 7EG0 | 31103 | 2024-03-16 | 2021-03-23 | 3.4 | 3.09 | — | 3.3 | 0.009 | 0.78 | 0.0 | 0.05 | 14.94 | 0.00 | 1.975 | 20.60 | 0.12 | 13.9 | 86.0 | 0.1 | -2.98 | 0.74 | 0.79 | 2.89 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15246 | 1878 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 6HUM | 0281 | 2024-03-24 | 2018-10-09 | 3.34 | 3.41 | — | 3.5 | 0.009 | 1.20 | 5.0 | 0.10 | 11.97 | 0.01 | 1.302 | 7.72 | 0.33 | 11.5 | 87.9 | 0.7 | -4.32 | 0.61 | 0.79 | 3.36 | 3.5 | 0.004 | 0.86 | 2.0 | 0.05 | 15.31 | 0.01 | 1.732 | 13.60 | 3.69 | 9.3 | 90.6 | 0.1 | -1.23 | 0.69 | 0.61 | 0.83 | 2.18 | 29521 | 3793 | 21 | 0 | 5 | 0 | 0 | logfile |
✔ | 7W0C | 32238 | 2024-03-16 | 2021-11-18 | 3.93 | 4.02 | — | 3.8 | 0.002 | 0.55 | 0.0 | 0.04 | 16.22 | 0.00 | 2.105 | 14.31 | 0.07 | 4.2 | 95.8 | 0.1 | -0.14 | 0.86 | 0.73 | 0.17 | 3.8 | 0.002 | 0.59 | 0.0 | 0.04 | 17.30 | 0.00 | 2.166 | 15.17 | 1.27 | 4.2 | 95.7 | 0.1 | -0.01 | 0.43 | 0.86 | 0.74 | 0.39 | 13663 | 1492 | 5 | 72 | 2 | 0 | 0 | logfile |
✔ | 6PT0 | 20470 | 2024-03-15 | 2019-07-14 | 3.2 | 3.63 | — | 3.5 | 0.006 | 0.89 | 0.0 | 0.06 | 10.15 | 0.01 | 2.222 | 5.12 | 0.00 | 2.8 | 97.2 | 0.0 | -2.48 | 0.67 | 0.75 | 1.99 | 3.5 | 0.004 | 0.66 | 0.0 | 0.04 | 14.17 | 0.00 | 2.095 | 14.09 | 2.94 | 3.1 | 96.9 | 0.0 | 0.41 | 1.67 | 0.70 | 0.81 | 2.02 | 10232 | 1284 | 6 | 0 | 9 | 0 | 0 | logfile |
✔ | 6X12 | 21986 | 2024-03-10 | 2020-05-18 | 3.52 | 3.69 | — | 3.7 | 0.008 | 1.08 | 0.0 | 0.06 | 16.64 | 0.01 | 2.322 | 3.01 | 0.00 | 2.7 | 97.3 | 0.0 | -5.29 | 0.65 | 0.84 | 1.43 | 3.7 | 0.002 | 0.62 | 0.0 | 0.04 | 16.26 | 0.00 | 2.263 | 7.61 | 2.84 | 2.5 | 97.5 | 0.0 | 0.21 | 1.17 | 0.67 | 0.85 | 1.33 | 3059 | 407 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6NJP | 9391 | 2024-03-18 | 2019-01-03 | 3.29 | 3.37 | — | 3.3 | 0.009 | 1.17 | 0.0 | 0.07 | 11.57 | 0.01 | 1.276 | 6.11 | 0.67 | 6.4 | 93.6 | 0.0 | -4.04 | 0.81 | 0.83 | 3.41 | 3.3 | 0.003 | 0.67 | 0.0 | 0.04 | 14.80 | 0.00 | 0.646 | 8.58 | 2.34 | 4.6 | 95.4 | 0.0 | -0.91 | 1.14 | 0.83 | 0.85 | 2.68 | 19607 | 2530 | 15 | 0 | 12 | 21 | 0 | logfile |
✔ | 7ZDJ | 14651 | 2024-03-13 | 2022-03-29 | 3.25 | 3.36 | — | 3.3 | 0.005 | 0.77 | 0.0 | 1.03 | 16.22 | 0.01 | 2.195 | 4.40 | 0.27 | 2.8 | 97.2 | 0.0 | -0.38 | 0.92 | 0.91 | 2.70 | 3.3 | 0.008 | 1.58 | 0.0 | 0.31 | 16.40 | 0.00 | 2.115 | 7.35 | 2.62 | 3.0 | 97.0 | 0.0 | 1.13 | 0.27 | 0.91 | 0.90 | 2.57 | 65812 | 8160 | 55 | 0 | 16 | 0 | 0 | logfile |
✔ | 6XKV | 22226 | 2024-03-15 | 2020-06-27 | 3.5 | 3.61 | — | 3.6 | 0.009 | 1.02 | 1.0 | 0.07 | 13.76 | 0.01 | 1.987 | 23.35 | 0.08 | 16.4 | 83.2 | 0.4 | -4.31 | 0.74 | 0.81 | 2.35 | 3.6 | 0.003 | 0.72 | 0.0 | 0.04 | 15.81 | 0.00 | 2.113 | 8.58 | 2.24 | 11.2 | 88.7 | 0.1 | -0.44 | 2.04 | 0.76 | 0.85 | 2.09 | 13079 | 1678 | 12 | 0 | 8 | 0 | 0 | logfile |