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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6K32 | 9907 | 2023-04-22 | 2019-05-16 | 3.2 | 3.73 | — | 3.8 | 0.009 | 1.22 | 1.0 | 0.07 | 11.49 | 0.01 | 1.345 | 10.22 | 1.25 | 6.3 | 93.3 | 0.3 | -4.88 | 0.28 | 0.72 | 1.49 | 3.7 | 0.004 | 0.78 | 0.0 | 0.05 | 16.38 | 0.00 | 1.254 | 13.10 | 0.77 | 5.7 | 94.2 | 0.0 | -1.38 | 1.36 | 0.31 | 0.82 | 2.33 | 61364 | 7723 | 10 | 8 | 6 | 0 | 0 | logfile |
✔ | 6K1H | 9906 | 2023-04-22 | 2019-05-10 | 3.52 | 3.52 | — | 3.5 | 0.007 | 0.98 | 0.0 | 0.05 | 13.18 | 0.01 | 1.774 | 20.26 | 0.90 | 13.3 | 86.5 | 0.2 | -4.44 | 0.64 | 0.82 | 1.93 | 3.5 | 0.003 | 0.76 | 0.0 | 0.04 | 15.34 | 0.01 | 2.115 | 14.29 | 0.41 | 8.5 | 91.5 | 0.0 | -1.75 | 1.51 | 0.64 | 0.81 | 1.95 | 11769 | 1560 | 9 | 0 | 3 | 0 | 0 | logfile |
✘ | 6K15 | 9905 | 2023-04-25 | 2019-05-09 | 3.4 | 3.68 | — | 3.6 | 0.005 | 0.96 | 0.0 | 0.05 | 10.23 | 0.01 | 1.639 | 5.00 | 0.33 | 8.6 | 91.3 | 0.1 | -4.21 | 0.74 | 0.78 | 2.17 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21486 | 2655 | 14 | 0 | 1 | 0 | 0 | logfile |
✔ | 6K0B | 9900 | 2023-04-27 | 2019-05-05 | 4.3 | 4.49 | — | 4.2 | 0.003 | 0.78 | 0.0 | 0.04 | 14.21 | 0.01 | 2.011 | 5.73 | 0.66 | 6.1 | 93.9 | 0.0 | -3.67 | 0.84 | 0.69 | — | 4.2 | 0.003 | 0.67 | 0.0 | 0.04 | 15.27 | 0.01 | 2.109 | 20.51 | 0.00 | 6.6 | 93.4 | 0.0 | -0.69 | 1.79 | 0.88 | 0.79 | — | 25908 | 1376 | 16 | 682 | 2 | 0 | 0 | logfile |
✘ | 6JZo | 9898 | 2023-04-25 | 2019-05-03 | 3.28 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21405 | 2657 | 8 | 0 | 12 | 0 | 0 | logfile |
✔ | 6JXR | 9895 | 2023-04-20 | 2019-04-24 | 3.7 | 3.95 | — | 3.9 | 0.008 | 1.01 | 0.0 | 0.06 | 10.83 | 0.01 | 2.273 | 5.82 | 0.74 | 7.2 | 92.6 | 0.2 | -3.45 | 0.69 | 0.78 | 2.74 | 3.9 | 0.004 | 0.72 | 0.0 | 0.04 | 15.74 | 0.00 | 2.115 | 12.41 | 0.96 | 6.5 | 93.3 | 0.2 | -0.19 | 1.71 | 0.66 | 0.79 | 2.08 | 8437 | 1073 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 6JXC | 9893 | 2023-04-23 | 2019-04-23 | 4.1 | 4.20 | — | 4.1 | 0.018 | 1.71 | 0.0 | 0.09 | 8.99 | 0.01 | 2.221 | 4.77 | 0.38 | 9.3 | 87.7 | 3.0 | -1.28 | 0.50 | 0.61 | — | 4.1 | 0.003 | 0.78 | 0.0 | 0.04 | 12.25 | 0.00 | 2.095 | 10.74 | 0.00 | 11.5 | 86.8 | 1.7 | 0.44 | 0.96 | 0.55 | 0.69 | — | 15270 | 2345 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6JXA | 9892 | 2023-04-23 | 2019-04-23 | 4.3 | 4.65 | — | 4.2 | 0.017 | 1.81 | 3.0 | 0.10 | 9.08 | 0.01 | 1.926 | 29.72 | 2.04 | 12.2 | 79.3 | 8.5 | -2.72 | 0.49 | 0.42 | — | 4.2 | 0.005 | 1.04 | 0.0 | 0.05 | 11.62 | 0.01 | 2.085 | 25.04 | 0.00 | 17.4 | 79.8 | 2.8 | -2.41 | 0.95 | 0.65 | 0.59 | — | 14100 | 2244 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 6JV2 | 9889 | 2023-04-21 | 2019-04-15 | 4.4 | 5.59 | — | 4.4 | 0.011 | 1.30 | 1.0 | 0.06 | 16.74 | 0.01 | 2.116 | 19.38 | 1.92 | 13.3 | 86.5 | 0.3 | -4.61 | 0.83 | 0.83 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 111080 | 14564 | 16 | 0 | 24 | 0 | 0 | logfile |
✔ | 6KUV | 9888 | 2023-04-22 | 2019-09-02 | 4.1 | 4.13 | — | 4.1 | 0.003 | 0.79 | 0.0 | 0.05 | 10.91 | 0.01 | 2.206 | 6.18 | 0.28 | 7.4 | 92.5 | 0.2 | -4.84 | 0.69 | 0.72 | — | 4.1 | 0.003 | 0.74 | 0.0 | 0.04 | 14.40 | 0.00 | 2.132 | 10.92 | 0.14 | 7.2 | 92.8 | 0.1 | -1.10 | 2.92 | 0.73 | 0.76 | — | 13720 | 1640 | 5 | 23 | 0 | 0 | 0 | logfile |
✔ | 6JT2 | 9885 | 2023-04-20 | 2019-04-08 | 3.8 | 3.88 | — | 3.8 | 0.004 | 0.74 | 0.0 | 0.04 | 11.14 | 0.01 | 1.980 | 10.08 | 3.54 | 4.0 | 95.7 | 0.3 | -2.54 | 0.80 | 0.80 | 2.23 | 3.8 | 0.003 | 0.69 | 0.0 | 0.04 | 13.57 | 0.00 | 1.319 | 10.96 | 0.12 | 3.7 | 96.3 | 0.0 | -0.17 | 1.66 | 0.82 | 0.81 | 1.64 | 8191 | 1075 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 6JT1 | 9884 | 2023-04-20 | 2019-04-08 | 3.9 | 4.00 | — | 3.9 | 0.004 | 0.77 | 0.0 | 0.04 | 12.20 | 0.00 | 2.212 | 10.33 | 4.62 | 5.8 | 93.8 | 0.4 | -2.92 | 0.77 | 0.81 | 2.21 | 3.9 | 0.003 | 0.76 | 0.0 | 0.04 | 14.37 | 0.00 | 2.123 | 11.28 | 0.33 | 4.3 | 95.6 | 0.1 | 0.34 | 1.25 | 0.81 | 0.82 | 2.01 | 8602 | 1118 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 6JT0 | 9883 | 2023-04-20 | 2019-04-08 | 4.0 | 4.28 | — | 4.0 | 0.004 | 0.71 | 0.0 | 0.04 | 12.21 | 0.00 | 2.212 | 11.03 | 4.73 | 5.7 | 93.9 | 0.4 | -2.84 | 0.85 | 0.82 | — | 4.0 | 0.003 | 0.86 | 0.0 | 0.05 | 13.73 | 0.00 | 2.209 | 12.74 | 0.22 | 5.1 | 94.9 | 0.0 | 0.23 | 1.67 | 0.86 | 0.82 | — | 8602 | 1118 | 2 | 0 | 1 | 0 | 0 | logfile |
✘ | 6JSi | 9882 | 2023-04-22 | 2019-04-08 | 4.7 | 4.70 | — | 4.6 | 0.007 | 1.48 | 0.0 | 0.06 | 15.33 | 0.01 | 2.231 | 10.68 | 2.42 | 23.2 | 72.3 | 4.5 | -6.05 | 0.64 | 0.72 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 62820 | 5844 | 9 | 0 | 4044 | 0 | 0 | logfile |
✘ | 6JRS | 9880 | 2023-04-21 | 2019-04-05 | 3.7 | 3.86 | — | 3.7 | 0.010 | 1.08 | 0.0 | 0.06 | 16.39 | 0.01 | 2.225 | 8.77 | 0.90 | 12.4 | 87.2 | 0.3 | -5.87 | 0.74 | 0.80 | 1.78 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 112168 | 14652 | 20 | 0 | 24 | 0 | 0 | logfile |
✘ | 6JRR | 9879 | 2023-04-20 | 2019-04-05 | 3.9 | 4.09 | — | 3.9 | 0.010 | 1.14 | 4.0 | 0.06 | 15.90 | 0.01 | 1.827 | 8.44 | 0.80 | 10.2 | 89.5 | 0.2 | -5.20 | 0.76 | 0.81 | 1.54 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 109132 | 14268 | 12 | 0 | 16 | 0 | 0 | logfile |
✔ | 6JQM | 9874 | 2023-04-29 | 2019-03-31 | 3.3 | 3.54 | — | 3.5 | 0.005 | 0.83 | 0.0 | 0.05 | 10.76 | 0.01 | 2.304 | 5.76 | 0.06 | 5.8 | 94.2 | 0.0 | -4.47 | 0.76 | 0.84 | 3.78 | 3.5 | 0.003 | 0.61 | 0.0 | 0.04 | 14.51 | 0.00 | 2.188 | 10.16 | 0.09 | 4.7 | 95.3 | 0.0 | -1.23 | 2.69 | 0.78 | 0.87 | 2.95 | 30936 | 4068 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 6JQ0 | 9872 | 2023-04-28 | 2019-03-28 | 3.54 | 4.12 | — | 4.0 | 0.007 | 1.21 | 0.0 | 0.06 | 16.27 | 0.01 | 2.235 | 4.90 | 0.63 | 13.0 | 86.5 | 0.5 | -5.59 | 0.69 | 0.85 | 1.20 | 4.0 | 0.004 | 0.84 | 0.0 | 0.05 | 17.30 | 0.01 | 2.062 | 9.76 | 0.43 | 13.0 | 86.7 | 0.3 | -2.20 | 0.54 | 0.66 | 0.83 | 0.99 | 26917 | 3323 | 13 | 0 | 20 | 0 | 0 | logfile |
✔ | 6JPU | 9871 | 2023-04-29 | 2019-03-28 | 4.27 | 5.69 | — | 6.0 | 0.007 | 1.03 | 0.0 | 0.06 | 17.27 | 0.01 | 1.984 | 70.08 | 9.58 | 9.8 | 90.1 | 0.2 | -3.97 | 0.80 | 0.76 | — | 5.2 | 0.003 | 0.67 | 0.0 | 0.04 | 13.41 | 0.00 | 1.861 | 100.50 | 0.00 | 10.5 | 89.5 | 0.0 | -1.47 | 1.12 | 0.80 | 0.78 | — | 30378 | 3462 | 6 | 0 | 0 | 0 | 2610 | logfile |
✔ | 6JPQ | 9870 | 2023-04-28 | 2019-03-27 | 4.44 | 5.93 | — | 7.2 | 0.006 | 1.13 | 0.0 | 0.06 | 12.18 | 0.01 | 2.195 | 10.45 | 0.57 | 9.1 | 90.9 | 0.0 | -5.01 | 0.81 | 0.77 | — | 6.0 | 0.004 | 0.82 | 0.0 | 0.05 | 12.94 | 0.01 | 2.056 | 29.36 | 0.00 | 9.2 | 90.8 | 0.0 | -2.14 | 1.80 | 0.83 | 0.81 | — | 27768 | 3462 | 6 | 0 | 0 | 0 | 0 | logfile |