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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6K9Q | 9952 | 2022-04-07 | 2019-06-17 | 3.1 | 3.28 | — | 3.5 | 0.007 | 1.09 | 4.0 | 0.06 | 11.35 | 0.01 | 1.554 | 9.53 | 0.29 | 6.3 | 93.6 | 0.1 | -3.33 | 0.51 | 0.77 | 2.45 | 3.5 | 0.004 | 0.72 | 0.0 | 0.04 | 14.62 | 0.00 | 2.052 | 17.43 | 0.72 | 6.1 | 93.9 | 0.0 | -1.29 | 0.58 | 0.51 | 0.80 | 2.06 | 76902 | 10451 | 26 | 0 | 0 | 0 | 0 | logfile |
✔ | 6K9L | 9950 | 2022-04-07 | 2019-06-16 | 4.27 | 4.50 | — | 4.2 | 0.001 | 0.49 | 0.0 | 0.04 | 9.31 | 0.00 | 2.240 | 4.75 | 4.95 | 4.6 | 95.4 | 0.0 | -3.11 | 0.84 | 0.71 | — | 4.2 | 0.003 | 0.70 | 0.0 | 0.04 | 9.93 | 0.00 | 2.093 | 13.21 | 0.00 | 8.3 | 91.7 | 0.0 | 0.47 | 1.81 | 0.85 | 0.75 | — | 30601 | 5103 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6K9F | 9948 | 2022-04-06 | 2019-06-15 | 3.7 | 7.50 | 4.15 | 7.2 | 0.002 | 0.45 | 0.0 | 0.03 | 11.87 | 0.00 | 2.356 | 5.29 | 0.00 | 0.0 | 100.0 | 0.0 | -0.68 | 0.66 | 0.76 | 0.04 | 7.0 | 0.004 | 1.14 | 0.0 | 0.05 | 18.10 | 0.00 | 2.005 | 26.86 | 0.63 | 1.3 | 98.7 | 0.0 | -0.41 | 3.86 | 0.67 | 0.84 | 0.10 | 8484 | 1044 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6K99 | 9947 | 2022-04-05 | 2019-06-14 | 4.1 | 6.62 | 4.25 | 6.7 | 0.003 | 0.72 | 0.0 | 0.04 | 12.51 | 0.00 | 2.388 | 7.15 | 1.46 | 7.6 | 92.4 | 0.0 | -2.97 | 0.73 | 0.83 | — | 6.9 | 0.003 | 0.89 | 0.0 | 0.05 | 13.30 | 0.01 | 2.126 | 21.95 | 0.00 | 7.5 | 92.5 | 0.0 | -1.50 | 1.85 | 0.75 | 0.88 | — | 8244 | 996 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6K7Y | 9945 | 2022-04-08 | 2019-06-10 | 3.6 | 3.57 | — | 3.5 | 0.006 | 0.71 | 0.0 | 0.04 | 15.91 | 0.00 | 2.190 | 6.96 | 0.06 | 4.7 | 95.2 | 0.1 | -1.75 | 0.81 | 0.85 | 2.48 | 3.5 | 0.002 | 0.54 | 0.0 | 0.04 | 15.85 | 0.00 | 2.207 | 7.29 | 0.24 | 4.2 | 95.8 | 0.0 | 1.23 | 0.47 | 0.81 | 0.85 | 2.22 | 32956 | 3872 | 29 | 0 | 26 | 0 | 0 | logfile |
✔ | 6K7X | 9944 | 2022-04-06 | 2019-06-10 | 3.27 | 3.51 | — | 3.4 | 0.008 | 1.07 | 0.0 | 0.06 | 17.46 | 0.01 | 2.270 | 3.56 | 0.21 | 4.2 | 95.8 | 0.0 | -4.41 | 0.80 | 0.85 | 3.00 | 3.4 | 0.003 | 0.58 | 0.0 | 0.04 | 16.51 | 0.00 | 2.215 | 6.12 | 0.26 | 3.6 | 96.4 | 0.0 | 0.93 | 0.44 | 0.81 | 0.87 | 2.27 | 22944 | 2622 | 24 | 0 | 30 | 0 | 0 | logfile |
✔ | 6K7N | 9942 | 2022-04-05 | 2019-06-07 | 2.84 | 2.94 | 2.68 | 2.9 | 0.013 | 1.53 | 0.0 | 0.07 | 15.45 | 0.01 | 2.046 | 6.84 | 0.44 | 8.0 | 91.9 | 0.1 | -3.74 | 0.61 | 0.85 | 3.92 | 2.9 | 0.005 | 0.69 | 0.0 | 0.05 | 16.68 | 0.00 | 1.897 | 11.18 | 1.83 | 6.7 | 93.3 | 0.0 | -1.04 | 0.47 | 0.66 | 0.83 | 3.57 | 10544 | 1308 | 4 | 0 | 8 | 0 | 0 | logfile |
✔ | 6K7M | 9941 | 2022-04-05 | 2019-06-07 | 2.95 | 3.08 | 2.77 | 3.0 | 0.012 | 1.43 | 0.0 | 0.07 | 15.23 | 0.01 | 2.002 | 5.30 | 0.61 | 6.8 | 93.1 | 0.1 | -3.41 | 0.65 | 0.85 | 3.61 | 3.0 | 0.004 | 0.64 | 0.0 | 0.04 | 16.23 | 0.00 | 1.952 | 9.43 | 2.27 | 5.1 | 94.9 | 0.0 | -0.10 | 0.51 | 0.67 | 0.85 | 3.07 | 10591 | 1307 | 4 | 0 | 9 | 0 | 0 | logfile |
✘ | 6K7L | 9939 | 2022-04-05 | 2019-06-07 | 2.83 | 2.93 | 2.81 | 2.9 | 0.012 | 1.15 | 0.0 | 0.07 | 15.48 | 0.01 | 1.976 | 4.79 | 0.17 | 7.5 | 92.3 | 0.2 | -3.27 | 0.58 | 0.83 | 3.57 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10615 | 1317 | 4 | 0 | 8 | 0 | 0 | logfile |
✔ | 6K7K | 9937 | 2022-04-05 | 2019-06-07 | 3.04 | 3.15 | 2.84 | 3.1 | 0.011 | 1.45 | 0.0 | 0.07 | 15.16 | 0.01 | 2.000 | 5.46 | 0.35 | 7.1 | 92.9 | 0.0 | -3.51 | 0.63 | 0.85 | 3.58 | 3.1 | 0.005 | 0.67 | 0.0 | 0.05 | 16.55 | 0.01 | 1.864 | 8.47 | 0.61 | 4.9 | 95.1 | 0.0 | -0.38 | 0.53 | 0.69 | 0.84 | 2.94 | 10586 | 1309 | 4 | 0 | 10 | 0 | 0 | logfile |
✔ | 6K7J | 9935 | 2022-04-05 | 2019-06-07 | 3.08 | 3.21 | 2.88 | 3.2 | 0.013 | 1.23 | 0.0 | 0.07 | 15.26 | 0.01 | 2.159 | 5.68 | 0.17 | 8.6 | 91.2 | 0.2 | -3.98 | 0.57 | 0.82 | 3.51 | 3.2 | 0.004 | 0.64 | 0.0 | 0.04 | 16.10 | 0.00 | 2.150 | 9.72 | 0.17 | 5.7 | 94.2 | 0.2 | -1.00 | 0.94 | 0.66 | 0.81 | 3.16 | 10602 | 1311 | 4 | 0 | 8 | 0 | 0 | logfile |
✔ | 6K7i | 9934 | 2022-04-05 | 2019-06-07 | 3.22 | 3.34 | 3.11 | 3.3 | 0.015 | 1.31 | 0.0 | 0.08 | 15.12 | 0.01 | 2.253 | 5.97 | 0.78 | 8.9 | 90.7 | 0.4 | -4.41 | 0.60 | 0.84 | 3.87 | 3.3 | 0.004 | 0.68 | 0.0 | 0.05 | 16.23 | 0.00 | 2.195 | 9.12 | 0.09 | 6.0 | 94.0 | 0.0 | -1.11 | 0.44 | 0.67 | 0.81 | 3.33 | 10590 | 1310 | 4 | 0 | 7 | 0 | 0 | logfile |
✔ | 6K7H | 9932 | 2022-04-05 | 2019-06-07 | 3.22 | 3.37 | 3.03 | 3.3 | 0.011 | 1.11 | 0.0 | 0.06 | 15.62 | 0.01 | 2.274 | 5.60 | 1.13 | 6.5 | 93.5 | 0.0 | -3.82 | 0.65 | 0.85 | 3.45 | 3.3 | 0.003 | 0.64 | 0.0 | 0.04 | 16.42 | 0.00 | 2.141 | 8.28 | 0.26 | 5.5 | 94.5 | 0.0 | -0.57 | 0.95 | 0.64 | 0.85 | 2.70 | 10577 | 1312 | 2 | 0 | 6 | 0 | 0 | logfile |
✔ | 6K7G | 9931 | 2022-04-05 | 2019-06-07 | 3.3 | 3.42 | 3.12 | 3.4 | 0.012 | 1.18 | 0.0 | 0.07 | 15.55 | 0.01 | 2.262 | 5.61 | 0.43 | 9.1 | 90.7 | 0.2 | -4.12 | 0.61 | 0.85 | 3.53 | 3.4 | 0.004 | 0.64 | 0.0 | 0.04 | 16.70 | 0.00 | 2.166 | 9.66 | 0.35 | 7.0 | 93.0 | 0.0 | -0.91 | 0.95 | 0.68 | 0.84 | 3.26 | 10569 | 1313 | 2 | 0 | 6 | 0 | 0 | logfile |
✘ | 6K61 | 9918 | 2022-04-09 | 2019-05-31 | 2.37 | 2.37 | — | 2.4 | 0.011 | 1.37 | 0.0 | 0.08 | 18.19 | 0.02 | 1.219 | 7.95 | 0.96 | 3.1 | 96.7 | 0.1 | -2.65 | 0.60 | 0.88 | 5.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 49283 | 4542 | 44 | 0 | 259 | 0 | 0 | logfile |
✔ | 6K4Y | 9916 | 2022-04-08 | 2019-05-27 | 3.79 | 3.88 | — | 3.9 | 0.008 | 0.98 | 0.0 | 0.06 | 14.87 | 0.01 | 2.242 | 8.96 | 0.68 | 7.6 | 92.3 | 0.1 | -4.54 | 0.61 | 0.69 | 1.81 | 3.8 | 0.003 | 0.67 | 0.0 | 0.04 | 17.77 | 0.00 | 2.080 | 10.59 | 0.30 | 5.8 | 94.2 | 0.0 | -0.93 | 2.04 | 0.72 | 0.81 | 1.12 | 33247 | 3950 | 11 | 105 | 3 | 0 | 0 | logfile |
✔ | 6K4M | 9915 | 2022-04-08 | 2019-05-24 | 4.5 | 7.82 | — | 7.8 | 0.006 | 1.01 | 0.0 | 0.05 | 17.74 | 0.00 | 2.258 | 13.35 | 0.54 | 1.8 | 98.2 | 0.0 | -4.61 | 0.68 | 0.84 | — | 7.8 | 0.005 | 0.94 | 0.0 | 0.04 | 15.43 | 0.01 | 2.093 | 29.60 | 0.30 | 3.2 | 96.8 | 0.0 | -0.76 | 1.59 | 0.71 | 0.87 | — | 31508 | 3790 | 48 | 0 | 36 | 0 | 0 | logfile |
✔ | 6K43 | 9913 | 2022-04-08 | 2019-05-23 | 3.7 | 4.12 | — | 4.0 | 0.007 | 0.72 | 0.0 | 0.04 | 15.85 | 0.00 | 1.266 | 17.54 | 0.12 | 6.9 | 93.1 | 0.0 | -2.02 | 0.75 | 0.82 | 1.49 | 4.1 | 0.003 | 0.67 | 0.0 | 0.03 | 18.00 | 0.00 | 1.656 | 5.49 | 0.42 | 2.9 | 97.1 | 0.0 | 4.46 | 0.86 | 0.75 | 0.80 | 1.58 | 31808 | 3840 | 48 | 0 | 36 | 0 | 0 | logfile |
✔ | 6K42 | 9912 | 2022-04-04 | 2019-05-23 | 4.1 | 4.04 | — | 4.1 | 0.005 | 0.86 | 0.0 | 0.05 | 9.20 | 0.01 | 2.288 | 4.27 | 0.31 | 5.4 | 94.6 | 0.0 | -4.37 | 0.60 | 0.63 | — | 4.0 | 0.004 | 0.77 | 0.0 | 0.04 | 13.48 | 0.00 | 2.143 | 14.56 | 0.21 | 7.7 | 92.3 | 0.0 | -1.60 | 2.65 | 0.67 | 0.74 | — | 8816 | 1116 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 6K41 | 9911 | 2022-04-04 | 2019-05-23 | 2.9 | 2.88 | — | 2.9 | 0.009 | 1.09 | 0.0 | 0.06 | 10.20 | 0.01 | 2.166 | 3.99 | 0.44 | 5.1 | 94.9 | 0.0 | -2.62 | 0.73 | 0.85 | 4.09 | 2.8 | 0.003 | 0.59 | 0.0 | 0.04 | 15.55 | 0.00 | 2.071 | 6.25 | 3.29 | 3.4 | 96.6 | 0.0 | 0.71 | 0.69 | 0.75 | 0.84 | 3.17 | 8430 | 1077 | 6 | 0 | 1 | 0 | 0 | logfile |