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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 3JAU | 6366 | 2023-04-22 | 2015-06-24 | 4.8 | 4.76 | — | 6.0 | 0.027 | 2.66 | 660.0 | 0.16 | 14.74 | 0.02 | 1.686 | 10.72 | 1.90 | 4.6 | 94.1 | 1.3 | -2.16 | 0.21 | 0.38 | — | 5.4 | 0.003 | 0.70 | 0.0 | 0.04 | 13.62 | 0.00 | 2.034 | 12.63 | 0.00 | 4.6 | 95.0 | 0.4 | -1.07 | 1.45 | 0.24 | 0.57 | — | 114900 | 14700 | 180 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VEA | 31944 | 2023-04-21 | 2021-09-08 | 3.7 | 3.55 | — | 3.5 | 0.009 | 1.13 | 0.0 | 0.04 | 13.48 | 0.00 | 2.098 | 6.48 | 0.58 | 1.5 | 98.4 | 0.0 | 2.51 | 0.65 | 0.78 | 1.44 | 3.5 | 0.004 | 0.77 | 0.0 | 0.04 | 16.55 | 0.00 | 2.063 | 15.67 | 0.57 | 2.2 | 97.7 | 0.0 | 2.25 | 1.43 | 0.69 | 0.77 | 1.04 | 111542 | 15594 | 165 | 0 | 84 | 0 | 0 | logfile |
✔ | 7SC9 | 25030 | 2023-04-23 | 2021-09-27 | 2.6 | 3.71 | 2.70 | 3.0 | 0.005 | 0.63 | 0.0 | 0.04 | 13.52 | 0.01 | 2.039 | 38.58 | 0.01 | 2.7 | 97.2 | 0.0 | 2.39 | 0.80 | 0.82 | 1.56 | 3.0 | 0.004 | 0.81 | 0.0 | 0.04 | 16.15 | 0.00 | 2.009 | 19.29 | 1.89 | 2.8 | 97.1 | 0.1 | 1.36 | 0.60 | 0.80 | 0.84 | 1.23 | 117262 | 14948 | 164 | 0 | 76 | 0 | 0 | logfile |
✔ | 7SC7 | 25028 | 2023-04-20 | 2021-09-27 | 2.8 | 3.66 | — | 3.3 | 0.007 | 1.08 | 1.0 | 0.06 | 14.67 | 0.01 | 2.240 | 6.50 | 1.49 | 2.4 | 97.6 | 0.0 | -1.25 | 0.73 | 0.87 | 1.85 | 3.2 | 0.005 | 0.99 | 1.0 | 0.05 | 16.95 | 0.01 | 1.998 | 23.67 | 2.66 | 3.2 | 96.8 | 0.0 | 0.75 | 0.70 | 0.72 | 0.88 | 1.52 | 107930 | 13756 | 156 | 0 | 72 | 0 | 0 | logfile |
✘ | 7Pi0 | 13429 | 2023-04-28 | 2021-08-19 | 2.43 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 77465 | 7442 | 133 | 0 | 354 | 1724 | 0 | logfile |
✘ | 6KAC | 9955 | 2023-04-28 | 2019-06-21 | 2.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 77947 | 7858 | 126 | 0 | 318 | 595 | 0 | logfile |
✘ | 7Pi5 | 13430 | 2023-04-28 | 2021-08-19 | 2.78 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 76287 | 7455 | 123 | 0 | 343 | 718 | 0 | logfile |
✔ | 7XXF | 33501 | 2023-04-29 | 2022-05-30 | 2.24 | 2.16 | 2.23 | 2.2 | 0.023 | 2.96 | 0.0 | 0.05 | 21.41 | 0.02 | 2.014 | 7.34 | 1.31 | 2.8 | 97.2 | 0.0 | 1.59 | 0.77 | 0.88 | 5.31 | 2.2 | 0.003 | 1.46 | 0.0 | 0.04 | 18.67 | 0.00 | 1.986 | 7.47 | 1.02 | 2.8 | 97.2 | 0.0 | 2.26 | 0.89 | 0.77 | 0.90 | 4.60 | 29826 | 3004 | 120 | 0 | 98 | 538 | 0 | logfile |
✔ | 7QSM | 14134 | 2023-04-26 | 2022-01-13 | 2.3 | 2.31 | — | 2.3 | 0.007 | 0.92 | 0.0 | 0.85 | 15.81 | 0.00 | 1.463 | 2.79 | 0.58 | 2.3 | 97.6 | 0.0 | 0.75 | 0.76 | 0.90 | 6.42 | 2.3 | 0.007 | 1.29 | 0.0 | 0.25 | 16.21 | 0.00 | 1.942 | 4.43 | 0.72 | 1.6 | 98.3 | 0.0 | 1.81 | 0.81 | 0.77 | 0.91 | 5.60 | 71640 | 8262 | 118 | 0 | 62 | 2774 | 0 | logfile |
✔ | 6X62 | 22068 | 2023-04-21 | 2020-05-27 | 3.5 | 3.69 | — | 3.7 | 0.014 | 1.87 | 45.0 | 0.09 | 15.63 | 0.01 | 2.185 | 6.98 | 4.90 | 8.5 | 91.5 | 0.0 | -3.87 | 0.65 | 0.64 | 0.52 | 3.6 | 0.004 | 0.87 | 0.0 | 0.05 | 16.24 | 0.00 | 1.996 | 20.45 | 0.90 | 6.4 | 93.6 | 0.0 | -1.71 | 1.27 | 0.74 | 0.82 | 1.24 | 109070 | 15548 | 117 | 0 | 0 | 0 | 0 | logfile |
✔ | 6X66 | 22071 | 2023-04-20 | 2020-05-27 | 4.2 | 6.75 | — | 8.4 | 0.016 | 1.73 | 27.0 | 0.08 | 14.04 | 0.01 | 2.162 | 21.79 | 0.38 | 12.3 | 87.7 | 0.0 | -3.77 | 0.72 | 0.45 | — | 4.2 | 0.004 | 0.84 | 0.0 | 0.05 | 12.78 | 0.00 | 1.926 | 28.73 | 0.02 | 8.6 | 91.3 | 0.1 | -2.41 | 2.90 | 0.78 | 0.63 | — | 109070 | 15548 | 117 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SCA | 25031 | 2023-04-20 | 2021-09-27 | 2.1 | 2.23 | 2.15 | 2.2 | 0.011 | 1.14 | 7.0 | 0.07 | 15.33 | 0.01 | 2.057 | 5.44 | 0.78 | 1.0 | 99.0 | 0.0 | 2.17 | 0.79 | 0.85 | 5.74 | 2.2 | 0.002 | 0.55 | 0.0 | 0.04 | 16.60 | 0.00 | 2.121 | 8.28 | 0.87 | 0.9 | 99.1 | 0.0 | 2.87 | 1.09 | 0.79 | 0.85 | 5.28 | 55437 | 6836 | 116 | 0 | 54 | 1325 | 0 | logfile |
✔ | 7SC8 | 25029 | 2023-04-20 | 2021-09-27 | 2.1 | 2.19 | 2.13 | 1.9 | 0.008 | 1.12 | 10.0 | 0.07 | 15.00 | 0.01 | 2.102 | 5.20 | 0.38 | 1.0 | 99.0 | 0.0 | 2.13 | 0.82 | 0.79 | 4.35 | 1.9 | 0.004 | 0.57 | 0.0 | 0.04 | 16.48 | 0.00 | 2.130 | 8.45 | 0.93 | 1.1 | 98.9 | 0.0 | 2.82 | 0.36 | 0.86 | 0.87 | 4.19 | 56784 | 6836 | 116 | 0 | 54 | 2672 | 0 | logfile |
✔ | 7R47 | 14282 | 2023-04-25 | 2022-02-08 | 2.3 | 2.29 | — | 2.3 | 0.008 | 0.81 | 0.0 | 0.85 | 17.14 | 0.01 | 1.921 | 2.60 | 1.15 | 2.1 | 97.9 | 0.0 | 0.85 | 0.73 | 0.90 | 6.13 | 2.3 | 0.007 | 1.32 | 0.0 | 0.26 | 16.92 | 0.00 | 1.867 | 4.03 | 1.22 | 1.6 | 98.4 | 0.0 | 1.61 | 1.49 | 0.74 | 0.92 | 5.86 | 68578 | 8089 | 116 | 0 | 51 | 1836 | 0 | logfile |
✔ | 7QSN | 14139 | 2023-04-26 | 2022-01-13 | 2.81 | 2.74 | 2.82 | 2.7 | 0.008 | 0.92 | 0.0 | 0.85 | 15.28 | 0.00 | 1.443 | 3.83 | 0.01 | 3.3 | 96.7 | 0.0 | -0.45 | 0.77 | 0.87 | 4.68 | 2.7 | 0.007 | 1.31 | 0.0 | 0.25 | 16.35 | 0.00 | 1.942 | 6.18 | 1.15 | 2.1 | 97.8 | 0.0 | 1.49 | 1.18 | 0.77 | 0.88 | 3.94 | 69320 | 8201 | 116 | 0 | 59 | 1096 | 0 | logfile |
✔ | 7QSK | 14132 | 2023-04-26 | 2022-01-13 | 2.84 | 2.93 | 2.90 | 2.8 | 0.008 | 0.91 | 0.0 | 0.84 | 15.15 | 0.00 | 1.435 | 3.34 | 0.15 | 3.1 | 96.9 | 0.1 | 0.26 | 0.77 | 0.87 | 4.81 | 2.9 | 0.007 | 1.30 | 0.0 | 0.25 | 16.30 | 0.00 | 1.969 | 5.83 | 0.87 | 2.1 | 97.8 | 0.0 | 1.67 | 0.50 | 0.78 | 0.90 | 3.97 | 69987 | 8291 | 116 | 0 | 59 | 1060 | 0 | logfile |
✔ | 7R45 | 14272 | 2023-04-25 | 2022-02-08 | 2.4 | 2.37 | — | 2.3 | 0.008 | 0.84 | 0.0 | 0.85 | 17.26 | 0.01 | 1.801 | 2.78 | 1.20 | 2.3 | 97.7 | 0.0 | 0.76 | 0.72 | 0.90 | 5.82 | 2.3 | 0.010 | 1.37 | 0.0 | 0.26 | 17.31 | 0.01 | 1.962 | 4.47 | 1.50 | 1.8 | 98.1 | 0.0 | 1.38 | 1.06 | 0.73 | 0.92 | 5.49 | 68195 | 8098 | 115 | 0 | 52 | 1334 | 0 | logfile |
✔ | 7R4F | 14302 | 2023-04-23 | 2022-02-08 | 2.4 | 2.39 | — | 2.3 | 0.007 | 0.79 | 0.0 | 0.87 | 17.28 | 0.01 | 1.904 | 2.94 | 1.29 | 2.5 | 97.5 | 0.0 | 0.66 | 0.73 | 0.90 | 5.70 | 2.4 | 0.007 | 1.33 | 0.0 | 0.26 | 17.05 | 0.00 | 2.078 | 4.33 | 1.41 | 1.8 | 98.2 | 0.0 | 1.64 | 0.26 | 0.74 | 0.91 | 5.08 | 65494 | 7788 | 114 | 0 | 44 | 1415 | 0 | logfile |
✔ | 7R42 | 14256 | 2023-04-26 | 2022-02-08 | 2.3 | 2.33 | — | 2.3 | 0.008 | 0.85 | 0.0 | 0.84 | 17.07 | 0.00 | 1.921 | 3.20 | 1.23 | 2.6 | 97.4 | 0.0 | 0.55 | 0.71 | 0.90 | 5.95 | 2.3 | 0.007 | 1.30 | 0.0 | 0.25 | 16.95 | 0.00 | 1.973 | 4.32 | 1.33 | 1.7 | 98.3 | 0.0 | 1.64 | 0.25 | 0.71 | 0.91 | 5.36 | 69480 | 8204 | 114 | 0 | 58 | 1545 | 0 | logfile |
✔ | 7RCV | 24407 | 2023-04-20 | 2021-07-08 | 2.01 | 1.78 | — | 1.9 | 0.024 | 2.38 | 0.0 | 0.11 | 20.31 | 0.01 | 1.915 | 13.94 | 1.99 | 2.6 | 97.4 | 0.0 | 0.92 | 0.78 | 0.79 | 5.10 | 1.9 | 0.007 | 0.98 | 0.0 | 0.06 | 19.24 | 0.01 | 1.984 | 13.17 | 1.79 | 3.0 | 97.0 | 0.0 | 0.41 | 0.91 | 0.81 | 0.84 | 5.30 | 54656 | 5544 | 114 | 0 | 228 | 1236 | 0 | logfile |