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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
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✘ | 7VFV | 31960 | 2023-08-16 | 2021-09-13 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19776 | 2383 | 8 | 0 | 40 | 0 | 0 | logfile |
✘ | 8DJM | 27461 | 2023-08-10 | 2022-07-01 | 3.23 | 3.66 | 3.31 | 3.6 | 0.029 | 1.53 | 2.0 | 1.04 | 15.98 | 0.00 | 1.844 | 8.23 | 0.82 | 3.7 | 96.3 | 0.0 | -2.26 | 0.49 | 0.75 | 3.22 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7032 | 862 | 7 | 0 | 8 | 0 | 0 | logfile |
✘ | 6JCV | 9798 | 2023-08-21 | 2019-01-30 | 2.92 | 4.05 | — | 3.7 | 0.007 | 0.90 | 0.0 | 0.06 | 13.94 | 0.01 | 2.341 | 5.00 | 0.00 | 5.2 | 94.8 | 0.0 | -5.68 | 0.87 | 0.86 | 3.38 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30876 | 3912 | 31 | 0 | 24 | 96 | 0 | logfile |
✘ | 6ZWo | 11492 | 2023-08-18 | 2020-07-28 | 3.0 | 3.30 | 3.09 | 3.2 | 0.004 | 0.58 | 0.0 | 0.04 | 14.53 | 0.00 | 2.167 | 6.24 | 1.26 | 3.7 | 96.3 | 0.0 | -2.70 | 0.70 | 0.84 | 1.88 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24994 | 3126 | 7 | 0 | 5 | 0 | 0 | logfile |
✘ | 7PXG | 13702 | 2023-08-20 | 2021-10-08 | 2.73 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 28664 | 3540 | 8 | 0 | 32 | 0 | 0 | logfile |
✘ | 6URT | 20862 | 2023-08-15 | 2019-10-24 | 3.27 | 4.11 | — | 3.7 | 0.008 | 1.36 | 1.0 | 0.06 | 17.24 | 0.01 | 2.285 | 7.74 | 3.41 | 9.0 | 91.0 | 0.0 | -4.88 | 0.73 | 0.83 | 2.80 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18263 | 2317 | 14 | 0 | 7 | 0 | 0 | logfile |
✘ | 8CYD | 27075 | 2023-08-20 | 2022-05-23 | 2.6 | 3.24 | 2.62 | 3.0 | 0.002 | 0.51 | 0.0 | 0.04 | 12.52 | 0.01 | 1.930 | 6.47 | 0.32 | 4.9 | 94.7 | 0.4 | 0.04 | 0.77 | 0.79 | 2.24 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 28454 | 3663 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 6YAC | 10746 | 2023-08-24 | 2020-03-12 | 2.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 38469 | 3332 | 45 | 0 | 243 | 56 | 0 | logfile |
✘ | 7LB5 | 23263 | 2023-08-17 | 2021-01-07 | 3.16 | 4.00 | — | 3.7 | 0.003 | 0.52 | 0.0 | 0.04 | 14.28 | 0.00 | 2.323 | 7.12 | 0.93 | 1.9 | 98.1 | 0.0 | -1.95 | 0.87 | 0.84 | 2.57 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 23616 | 3120 | 12 | 0 | 0 | 0 | 0 | logfile |
✘ | 7XLQ | 33285 | 2023-08-16 | 2022-04-22 | 3.1 | 3.36 | 3.17 | 3.4 | 0.006 | 0.85 | 0.0 | 0.05 | 14.86 | 0.01 | 2.117 | 12.12 | 0.33 | 8.0 | 91.9 | 0.1 | -3.52 | 0.65 | 0.81 | 3.29 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20132 | 2436 | 8 | 0 | 33 | 0 | 0 | logfile |
✘ | 6SWC | 10322 | 2023-08-17 | 2019-09-20 | 3.3 | 4.36 | 3.31 | 3.3 | 0.015 | 0.97 | 0.0 | 0.05 | 16.16 | 0.04 | 1.823 | 9.66 | 0.13 | 13.4 | 86.6 | 0.0 | -5.19 | 0.83 | 0.72 | 1.86 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 70744 | 4519 | 48 | 1593 | 41 | 42 | 0 | logfile |
✘ | 8CVX | 27020 | 2023-08-16 | 2022-05-18 | 3.5 | 3.62 | 3.40 | 3.6 | 0.009 | 1.58 | 16.0 | 0.11 | 16.44 | 0.01 | 2.272 | 8.19 | 5.13 | 4.5 | 95.3 | 0.2 | -3.03 | 0.64 | 0.75 | 1.74 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20448 | 2541 | 12 | 0 | 4 | 0 | 0 | logfile |
✘ | 8EoE | 28373 | 2023-08-18 | 2022-10-03 | 3.2 | 3.93 | 3.21 | 3.5 | 0.003 | 0.63 | 0.0 | 0.05 | 22.19 | 0.01 | 1.984 | 5.34 | 17.34 | 9.0 | 90.4 | 0.5 | -3.14 | 0.88 | 0.86 | 2.23 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25301 | 3030 | 10 | 88 | 3 | 0 | 0 | logfile |
✘ | 8DJK | 27460 | 2023-08-10 | 2022-06-30 | 3.33 | 3.77 | 3.32 | 3.7 | 0.029 | 1.52 | 1.0 | 1.03 | 15.27 | 0.01 | 1.327 | 7.25 | 0.82 | 5.0 | 95.0 | 0.0 | -1.84 | 0.48 | 0.73 | 2.65 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7091 | 870 | 7 | 0 | 8 | 0 | 0 | logfile |
✘ | 7XVF | 33485 | 2023-08-13 | 2022-05-22 | 2.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13625 | 1554 | 8 | 0 | 42 | 0 | 0 | logfile |
✘ | 6UiW | 20789 | 2023-08-17 | 2019-10-01 | 2.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 23617 | 3234 | 22 | 0 | 11 | 0 | 0 | logfile |
✘ | 7FBS | 31519 | 2023-08-11 | 2021-07-12 | 3.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9274 | 1118 | 1 | 0 | 17 | 0 | 0 | logfile |
✘ | 8CXN | 27061 | 2023-08-10 | 2022-05-22 | 2.9 | 3.69 | 2.99 | 3.3 | 0.002 | 0.50 | 3.0 | 0.05 | 11.36 | 0.00 | 1.974 | 5.44 | 0.06 | 3.5 | 96.4 | 0.1 | 0.27 | 0.78 | 0.71 | 1.63 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 57131 | 3678 | 9 | 0 | 30 | 0 | 27987 | logfile |
✘ | 6DZV | 8940 | 2023-08-09 | 2018-07-05 | 4.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6121 | 765 | 5 | 0 | 4 | 0 | 0 | logfile |
✘ | 7EWR | 31363 | 2023-08-23 | 2021-05-26 | 4.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25779 | 2516 | 6 | 0 | 0 | 0 | 6804 | logfile |