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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5J8V | 8073 | 2024-03-16 | 2016-04-08 | 4.9 | 4.81 | — | 4.7 | 0.024 | 2.67 | 214.0 | 0.16 | 10.17 | 0.01 | 1.145 | 73.68 | 28.71 | 6.2 | 86.5 | 7.3 | 2.50 | 0.71 | 0.67 | — | 4.7 | 0.003 | 0.94 | 0.0 | 0.04 | 9.04 | 0.00 | 2.223 | 6.51 | 0.63 | 12.6 | 85.4 | 2.0 | -1.65 | 0.84 | 0.75 | 0.74 | — | 73616 | 13812 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ELE | 31182 | 2024-03-15 | 2021-04-09 | 4.9 | 8.62 | — | 7.5 | 0.007 | 1.16 | 0.0 | 0.06 | 21.73 | 0.01 | 2.210 | 17.86 | 8.44 | 9.1 | 90.1 | 0.8 | -3.55 | 0.87 | 0.71 | — | 7.5 | 0.003 | 0.74 | 0.0 | 0.04 | 18.90 | 0.00 | 2.058 | 28.35 | 0.00 | 9.5 | 90.3 | 0.2 | -1.83 | 1.67 | 0.88 | 0.77 | — | 10733 | 1137 | 2 | 83 | 0 | 0 | 0 | logfile |
✔ | 8A5Y | 15199 | 2024-03-11 | 2022-06-16 | 4.9 | 5.07 | 4.78 | 4.9 | 0.004 | 0.88 | 4.0 | 0.05 | 13.25 | 0.00 | 1.998 | 18.51 | 0.05 | 3.9 | 95.8 | 0.4 | 0.86 | 0.85 | 0.76 | — | 4.9 | 0.003 | 0.68 | 0.0 | 0.04 | 13.58 | 0.00 | 2.123 | 15.31 | 0.00 | 4.5 | 95.3 | 0.2 | 0.59 | 0.66 | 0.86 | 0.78 | — | 57866 | 7213 | 18 | 0 | 3 | 0 | 0 | logfile |
✔ | 7KPW | 22990 | 2024-03-10 | 2020-11-12 | 4.9 | 5.04 | 4.74 | 4.9 | 0.009 | 1.54 | 4.0 | 0.10 | 1.89 | 0.01 | 2.279 | 3.61 | 0.00 | 3.9 | 94.9 | 1.2 | 4.09 | 0.75 | 0.67 | — | 4.9 | 0.003 | 0.73 | 0.0 | 0.04 | 5.85 | 0.00 | 2.148 | 2.79 | 0.00 | 11.5 | 87.9 | 0.6 | -0.50 | 2.04 | 0.82 | 0.82 | — | 4313 | 865 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5LMV | 4083 | 2024-03-11 | 2016-08-01 | 4.9 | 6.86 | 6.64 | 6.7 | 0.008 | 1.34 | 34.0 | 0.11 | 25.94 | 0.01 | 0.977 | 14.22 | 15.18 | 9.6 | 87.9 | 2.5 | -1.98 | 0.70 | 0.58 | — | 6.7 | 0.004 | 0.79 | 0.0 | 0.04 | 24.30 | 0.01 | 1.881 | 37.21 | 0.00 | 8.0 | 91.5 | 0.5 | -1.77 | 2.22 | 0.78 | 0.77 | — | 59470 | 3124 | 30 | 1612 | 4 | 0 | 0 | logfile |
✔ | 7MoA | 23922 | 2024-03-15 | 2021-05-01 | 4.9 | 4.75 | — | 4.0 | 0.011 | 1.37 | 0.0 | 0.08 | 22.29 | 0.01 | 1.983 | 27.58 | 10.24 | 8.6 | 91.0 | 0.5 | -1.69 | 0.83 | 0.76 | — | 3.9 | 0.005 | 0.86 | 0.0 | 0.05 | 14.38 | 0.01 | 2.091 | 31.75 | 0.00 | 8.6 | 91.4 | 0.0 | -1.93 | 1.83 | 0.84 | 0.80 | — | 12511 | 1580 | 5 | 0 | 12 | 0 | 0 | logfile |
✔ | 7PD4 | 13330 | 2024-03-11 | 2021-08-04 | 4.9 | 4.13 | — | 7.8 | 0.005 | 0.87 | 0.0 | 0.05 | 14.59 | 0.00 | 2.035 | 38.59 | 0.00 | 11.7 | 88.3 | 0.0 | -4.80 | 0.73 | 0.72 | — | 7.8 | 0.005 | 0.84 | 0.0 | 0.05 | 13.74 | 0.00 | 2.064 | 24.98 | 0.00 | 6.5 | 93.5 | 0.0 | -0.78 | 1.47 | 0.73 | 0.74 | — | 6676 | 842 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 3iZK | 5247 | 2024-03-11 | 2010-10-29 | 4.9 | 4.48 | — | 7.1 | 0.014 | 1.48 | 16.0 | 0.08 | 12.45 | 0.02 | 2.461 | 2.38 | 0.77 | 2.0 | 97.5 | 0.4 | -1.62 | 0.65 | 0.48 | — | 6.9 | 0.003 | 0.76 | 0.0 | 0.05 | 13.33 | 0.00 | 2.167 | 26.82 | 0.00 | 4.3 | 95.7 | 0.0 | -0.87 | 2.00 | 0.75 | 0.57 | — | 58448 | 7856 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 8HiA | 34813 | 2024-03-11 | 2022-11-19 | 4.9 | 4.49 | 2.13 | 9.6 | 0.001 | 0.36 | 0.0 | 0.05 | 15.83 | 0.00 | 2.251 | 1.11 | 2.86 | 12.1 | 87.6 | 0.2 | -4.39 | 0.47 | 0.07 | — | 9.4 | 0.009 | 0.98 | 0.0 | 0.05 | 15.73 | 0.01 | 2.082 | 32.36 | 4.76 | 19.0 | 81.0 | 0.0 | -5.53 | 12.59 | 0.68 | 0.24 | — | 7200 | 460 | 20 | 0 | 0 | 0 | 3660 | logfile |
✔ | 7CCR | 30340 | 2024-03-21 | 2020-06-17 | 4.9 | 6.57 | — | 4.8 | 0.007 | 0.96 | 0.0 | 0.06 | 24.75 | 0.01 | 1.593 | 7.02 | 0.11 | 4.4 | 95.6 | 0.0 | -2.64 | 0.83 | 0.67 | — | 4.8 | 0.004 | 0.69 | 0.0 | 0.04 | 27.11 | 0.00 | 2.040 | 23.21 | 0.05 | 4.8 | 95.2 | 0.0 | 0.04 | 1.54 | 0.88 | 0.77 | — | 29722 | 2202 | 22 | 588 | 0 | 0 | 0 | logfile |
✔ | 7RSi | 24672 | 2024-03-15 | 2021-08-11 | 4.9 | 7.04 | 5.29 | 7.8 | 0.015 | 1.51 | 0.0 | 0.07 | 12.44 | 0.01 | 2.015 | 5.90 | 0.00 | 4.5 | 94.6 | 0.9 | -0.32 | 0.82 | 0.69 | — | 7.7 | 0.003 | 0.57 | 0.0 | 0.04 | 12.93 | 0.00 | 1.862 | 14.47 | 0.00 | 6.5 | 93.5 | 0.0 | -0.14 | 1.21 | 0.82 | 0.68 | — | 10886 | 686 | 2 | 0 | 2 | 0 | 5400 | logfile |
✔ | 5VoT | 8721 | 2024-03-17 | 2017-05-03 | 4.9 | 4.98 | — | 4.9 | 0.004 | 0.67 | 0.0 | 0.04 | 7.57 | 0.00 | 2.126 | 11.91 | 0.00 | 8.5 | 91.5 | 0.0 | -4.03 | 0.63 | 0.71 | — | 4.9 | 0.003 | 0.70 | 0.0 | 0.04 | 10.85 | 0.00 | 2.167 | 13.62 | 0.00 | 5.4 | 94.6 | 0.0 | 0.29 | 0.85 | 0.65 | 0.80 | — | 16463 | 2322 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EXQ | 28659 | 2024-03-14 | 2022-10-25 | 4.9 | 5.40 | 5.55 | 6.0 | 0.020 | 1.74 | 0.0 | 0.10 | 10.28 | 0.01 | 2.002 | 1.81 | 0.00 | 2.5 | 97.3 | 0.2 | 0.34 | 0.52 | 0.45 | — | 5.9 | 0.003 | 0.72 | 0.0 | 0.04 | 12.63 | 0.00 | 2.230 | 15.59 | 0.00 | 4.5 | 95.3 | 0.2 | -0.38 | 2.51 | 0.57 | 0.62 | — | 9304 | 1108 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8DS6 | 27684 | 2024-03-14 | 2022-07-21 | 4.9 | 4.18 | 4.54 | 3.7 | 0.012 | 1.43 | 0.0 | 0.06 | 10.65 | 0.01 | 2.494 | 0.39 | 0.00 | 1.4 | 98.6 | 0.0 | 1.06 | 0.85 | 0.67 | — | 3.7 | 0.003 | 0.57 | 0.0 | 0.04 | 11.45 | 0.01 | 2.212 | 9.28 | 0.00 | 2.3 | 97.7 | 0.0 | 1.68 | 1.09 | 0.85 | 0.63 | — | 10135 | 669 | 2 | 0 | 0 | 0 | 5107 | logfile |
✘ | 5ZCS | 6913 | 2024-03-25 | 2018-02-20 | 4.9 | 5.50 | — | 6.9 | 0.003 | 0.77 | 0.0 | 0.05 | 9.66 | 0.01 | 2.281 | 3.31 | 0.05 | 5.6 | 94.3 | 0.1 | -5.28 | 0.85 | 0.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 49176 | 6644 | 8 | 0 | 278 | 0 | 0 | logfile |
✔ | 5LJo | 4061 | 2024-03-19 | 2016-07-19 | 4.9 | 7.28 | — | 5.9 | 0.014 | 1.69 | 1.0 | 0.08 | 11.01 | 0.01 | 2.147 | 5.45 | 0.15 | 9.4 | 86.8 | 3.8 | -2.52 | 0.69 | 0.58 | — | 5.8 | 0.004 | 0.72 | 0.0 | 0.04 | 12.90 | 0.01 | 1.933 | 21.13 | 0.00 | 12.9 | 86.8 | 0.3 | -2.47 | 1.33 | 0.80 | 0.80 | — | 24947 | 1624 | 5 | 0 | 0 | 0 | 12255 | logfile |
✔ | 7PTL | 13630 | 2024-03-19 | 2021-09-27 | 4.9 | 10.06 | 4.95 | — | 0.005 | 1.01 | 0.0 | 0.06 | 23.55 | 0.01 | 2.401 | 0.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.88 | 0.79 | — | — | 0.007 | 0.87 | 0.0 | 0.04 | 27.76 | 0.01 | 1.723 | 81.11 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.51 | 0.92 | 0.92 | — | 23080 | 0 | 1 | 720 | 0 | 0 | 7743 | logfile |
✔ | 6PWC | 20505 | 2024-03-10 | 2019-07-22 | 4.9 | 5.55 | — | 4.5 | 0.003 | 0.67 | 0.0 | 0.05 | 4.68 | 0.01 | 2.345 | 2.19 | 0.00 | 1.3 | 98.7 | 0.0 | -0.09 | 0.61 | 0.67 | — | 4.6 | 0.004 | 0.75 | 0.0 | 0.04 | 6.37 | 0.00 | 2.094 | 19.59 | 0.00 | 7.2 | 92.8 | 0.0 | -0.38 | 1.57 | 0.61 | 0.59 | — | 5879 | 1055 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Q0J | 20550 | 2024-03-11 | 2019-08-01 | 4.9 | 4.69 | — | 4.1 | 0.012 | 1.53 | 3.0 | 0.09 | 8.72 | 0.00 | 2.229 | 2.10 | 0.00 | 5.4 | 93.3 | 1.3 | -2.84 | 0.74 | 0.63 | — | 4.2 | 0.002 | 0.67 | 0.0 | 0.04 | 8.51 | 0.00 | 1.946 | 5.63 | 0.00 | 6.2 | 93.4 | 0.4 | 0.10 | 1.61 | 0.85 | 0.79 | — | 8213 | 1633 | 8 | 0 | 6 | 0 | 0 | logfile |
✔ | 6oCE | 20017 | 2024-03-15 | 2019-03-23 | 4.9 | 4.11 | — | 4.0 | 0.006 | 0.73 | 0.0 | 0.04 | 8.07 | 0.01 | 1.868 | 8.56 | 0.00 | 9.9 | 90.1 | 0.0 | -4.37 | 0.45 | 0.60 | — | 4.0 | 0.003 | 0.71 | 0.0 | 0.04 | 12.27 | 0.01 | 2.249 | 11.38 | 0.00 | 12.6 | 87.4 | 0.0 | -2.49 | 1.76 | 0.46 | 0.62 | — | 11228 | 1378 | 2 | 0 | 0 | 0 | 0 | logfile |