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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 3JBS | 6478 | 2023-04-19 | 2015-10-13 | 2.9 | 3.04 | — | 3.2 | 0.010 | 1.32 | 0.0 | 0.06 | 8.67 | 0.01 | 2.510 | 0.00 | 0.00 | 2.9 | 97.1 | 0.0 | 0.51 | 0.21 | 0.76 | 4.15 | 3.0 | 0.003 | 0.61 | 0.0 | 0.04 | 18.11 | 0.00 | 2.225 | 5.17 | 3.95 | 1.7 | 98.3 | 0.0 | 0.99 | 1.75 | 0.21 | 0.81 | 3.63 | 1401 | 175 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5GAK | 3227 | 2023-04-26 | 2015-12-09 | 3.88 | 4.13 | — | 19.0 | 0.006 | 0.94 | 0.0 | 0.06 | 20.85 | 0.01 | 0.816 | 23.89 | 0.26 | 9.2 | 90.2 | 0.7 | -3.81 | 0.21 | 0.02 | 0.28 | 3.9 | 0.003 | 0.72 | 0.0 | 0.04 | 18.78 | 0.00 | 2.007 | 19.48 | 0.38 | 8.0 | 91.6 | 0.4 | -2.15 | 1.90 | 0.32 | 0.21 | 0.08 | 128975 | 6434 | 50 | 3597 | 234 | 0 | 0 | logfile |
✔ | 7X34 | 32978 | 2023-04-19 | 2022-02-27 | 3.1 | 5.47 | 3.73 | 3.1 | 0.009 | 1.17 | 0.0 | 0.05 | 18.59 | 0.01 | 2.316 | 5.71 | 0.00 | 3.1 | 96.9 | 0.0 | -2.86 | 0.21 | 0.78 | 1.18 | 3.2 | 0.005 | 0.85 | 0.0 | 0.04 | 20.14 | 0.00 | 2.077 | 35.35 | 0.00 | 5.1 | 94.9 | 0.0 | 0.09 | 0.71 | 0.21 | 0.78 | 1.18 | 2762 | 100 | 2 | 94 | 0 | 0 | 0 | logfile |
✔ | 6Z3T | 11064 | 2023-04-20 | 2020-05-21 | 2.69 | 3.99 | 3.36 | 3.9 | 0.010 | 1.90 | 1.0 | 0.07 | 17.55 | 0.01 | 2.284 | 6.72 | 1.60 | 9.6 | 90.2 | 0.2 | -5.84 | 0.21 | 0.59 | 1.55 | 3.9 | 0.005 | 1.17 | 0.0 | 0.04 | 18.69 | 0.01 | 2.149 | 16.73 | 2.14 | 8.6 | 91.4 | 0.0 | -2.15 | 0.93 | 0.21 | 0.66 | 0.77 | 3608 | 441 | 4 | 0 | 21 | 0 | 0 | logfile |
✔ | 7W6P | 32331 | 2023-04-20 | 2021-12-02 | 3.47 | 3.79 | — | 9.6 | 0.004 | 0.70 | 0.0 | 0.04 | 13.78 | 0.00 | 2.196 | 14.60 | 0.11 | 7.0 | 93.0 | 0.0 | -0.94 | 0.22 | 0.11 | 0.18 | 8.7 | 0.003 | 0.68 | 0.0 | 0.04 | 15.37 | 0.00 | 2.199 | 14.66 | 0.44 | 5.7 | 94.3 | 0.0 | -0.83 | 1.94 | 0.31 | 0.25 | 0.54 | 8408 | 1083 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7FG3 | 31577 | 2023-04-21 | 2021-07-25 | 3.9 | 3.62 | — | 4.0 | 0.006 | 1.13 | 0.0 | 0.06 | 14.47 | 0.01 | 1.929 | 37.29 | 0.00 | 18.5 | 80.8 | 0.7 | -4.60 | 0.22 | 0.47 | -0.27 | 4.0 | 0.004 | 0.92 | 0.0 | 0.05 | 16.64 | 0.01 | 2.088 | 24.71 | 0.10 | 15.3 | 84.1 | 0.5 | -3.68 | 0.78 | 0.23 | 0.45 | 0.35 | 9054 | 1166 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RJU | 4906 | 2023-04-19 | 2019-04-29 | 3.2 | 4.49 | 2.14 | 10.0 | 0.007 | 0.93 | 0.0 | 0.05 | 15.36 | 0.00 | 2.423 | 4.52 | 0.00 | 11.6 | 88.4 | 0.0 | -7.10 | 0.22 | -0.01 | -0.80 | 9.8 | 0.003 | 0.63 | 0.0 | 0.03 | 15.97 | 0.00 | 2.424 | 6.03 | 0.00 | 6.2 | 93.8 | 0.0 | -0.13 | 1.31 | 0.27 | 0.05 | 0.48 | 1992 | 131 | 1 | 0 | 0 | 0 | 997 | logfile |
✔ | 3JC2 | 3245 | 2023-04-20 | 2015-11-15 | 3.6 | 3.58 | 3.97 | 3.7 | 0.012 | 1.63 | 2.0 | 0.08 | 14.90 | 0.01 | 1.175 | 18.51 | 7.32 | 11.5 | 84.5 | 4.0 | -4.52 | 0.22 | 0.59 | 1.48 | 3.6 | 0.004 | 0.86 | 0.0 | 0.04 | 17.18 | 0.00 | 2.128 | 14.33 | 0.49 | 7.4 | 91.9 | 0.6 | -1.41 | 3.32 | 0.24 | 0.53 | 1.66 | 3911 | 482 | 4 | 0 | 32 | 0 | 0 | logfile |
✔ | 7KU5 | 23034 | 2023-04-19 | 2020-11-24 | 3.76 | 3.63 | — | 3.9 | 0.006 | 1.29 | 0.0 | 0.07 | 14.85 | 0.01 | 2.420 | 3.63 | 0.00 | 12.8 | 87.2 | 0.0 | -5.41 | 0.23 | 0.65 | -0.48 | 3.9 | 0.002 | 0.72 | 0.0 | 0.04 | 15.66 | 0.01 | 2.252 | 10.89 | 0.00 | 9.3 | 90.7 | 0.0 | -1.34 | 1.18 | 0.24 | 0.69 | 2.46 | 750 | 88 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7BC5 | 12139 | 2023-04-19 | 2020-12-18 | 3.1 | 3.06 | 3.11 | 3.1 | 0.005 | 1.05 | 0.0 | 0.05 | 15.92 | 0.01 | 2.314 | 7.83 | 0.76 | 8.2 | 91.8 | 0.0 | -5.64 | 0.23 | 0.62 | 0.92 | 3.0 | 0.003 | 0.72 | 0.0 | 0.04 | 17.04 | 0.00 | 2.243 | 14.42 | 0.76 | 7.5 | 92.5 | 0.0 | -2.75 | 1.30 | 0.23 | 0.58 | 0.92 | 1200 | 161 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6SXo | 10344 | 2023-04-23 | 2019-09-26 | 3.3 | 3.36 | — | 3.3 | 0.009 | 1.35 | 0.0 | 0.07 | 16.45 | 0.01 | 2.142 | 5.99 | 1.16 | 4.7 | 95.3 | 0.0 | -4.39 | 0.26 | 0.72 | 2.92 | 3.3 | 0.003 | 0.60 | 0.0 | 0.03 | 16.58 | 0.00 | 2.112 | 10.83 | 0.70 | 3.9 | 96.1 | 0.0 | -1.17 | 0.66 | 0.26 | 0.77 | 1.97 | 14894 | 973 | 8 | 326 | 0 | 0 | 0 | logfile |
✔ | 6X0U | 21984 | 2023-04-19 | 2020-05-17 | 3.6 | 3.62 | — | 3.6 | 0.004 | 0.62 | 0.0 | 0.04 | 14.50 | 0.00 | 2.277 | 5.74 | 0.00 | 3.7 | 96.1 | 0.3 | -5.79 | 0.26 | 0.78 | 1.89 | 3.6 | 0.002 | 0.69 | 0.0 | 0.04 | 17.79 | 0.00 | 2.197 | 7.98 | 0.29 | 3.2 | 96.8 | 0.0 | 1.27 | 0.82 | 0.27 | 0.79 | 2.52 | 3091 | 398 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8A1S | 15086 | 2023-04-24 | 2022-06-02 | 4.0 | 3.83 | 3.95 | 37.0 | 0.008 | 0.74 | 0.0 | 0.05 | 10.01 | 0.00 | 1.988 | 10.18 | 0.97 | 3.9 | 96.0 | 0.2 | -0.24 | 0.26 | 0.00 | — | 3.5 | 0.004 | 0.76 | 0.0 | 0.05 | 12.92 | 0.01 | 2.069 | 15.85 | 0.36 | 4.4 | 95.5 | 0.2 | -1.00 | 1.62 | 0.32 | 0.20 | — | 67152 | 8528 | 32 | 0 | 32 | 0 | 0 | logfile |
✔ | 6iAC | 4435 | 2023-04-20 | 2018-11-26 | 3.9 | 4.05 | — | 4.0 | 0.009 | 1.31 | 0.0 | 0.07 | 12.35 | 0.01 | 2.250 | 5.01 | 1.10 | 12.0 | 87.9 | 0.2 | -4.54 | 0.26 | 0.77 | 1.92 | 4.0 | 0.004 | 0.91 | 0.0 | 0.05 | 16.30 | 0.00 | 2.076 | 13.77 | 0.86 | 8.4 | 91.6 | 0.0 | -0.67 | 1.03 | 0.26 | 0.76 | 1.34 | 8210 | 1057 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 8A06 | 15051 | 2023-04-19 | 2022-05-26 | 4.0 | 3.63 | 3.78 | 3.8 | 0.003 | 0.56 | 0.0 | 0.05 | 13.75 | 0.00 | 2.201 | 6.79 | 0.73 | 2.8 | 97.2 | 0.0 | -0.86 | 0.27 | 0.78 | — | 3.7 | 0.004 | 0.65 | 0.0 | 0.05 | 17.25 | 0.00 | 2.290 | 6.79 | 0.00 | 4.8 | 95.2 | 0.0 | -1.23 | 0.40 | 0.27 | 0.80 | — | 1185 | 147 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DFo | 27409 | 2023-04-26 | 2022-06-22 | 3.1 | 3.40 | 3.29 | 7.2 | 0.022 | 1.64 | 93.0 | 0.16 | 17.81 | 0.01 | 1.724 | 6.88 | 0.57 | 4.8 | 95.2 | 0.0 | -0.44 | 0.27 | 0.07 | 0.22 | 3.4 | 0.003 | 0.75 | 0.0 | 0.04 | 17.28 | 0.01 | 2.086 | 17.82 | 0.12 | 4.2 | 95.8 | 0.0 | -0.71 | 1.86 | 0.44 | 0.39 | 0.56 | 23861 | 2912 | 13 | 45 | 0 | 0 | 0 | logfile |
✔ | 3KTT | 5148 | 2023-04-20 | 2009-11-25 | 4.0 | 2.33 | — | 4.5 | 0.020 | 2.86 | 20.0 | 0.20 | 15.20 | 0.01 | 1.652 | 179.94 | 7.82 | 6.3 | 89.4 | 4.3 | -0.59 | 0.27 | 0.28 | — | 1.6 | 0.005 | 1.21 | 0.0 | 0.05 | 17.07 | 0.01 | 2.016 | 34.63 | 0.49 | 11.5 | 87.3 | 1.2 | -2.51 | 2.08 | 0.31 | 0.43 | — | 3855 | 513 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FD5 | 29002 | 2023-04-19 | 2022-12-02 | 4.57 | 4.19 | — | 10.0 | 0.016 | 2.15 | 4.0 | 0.13 | 13.14 | 0.02 | 2.541 | 0.16 | 0.29 | 3.8 | 96.2 | 0.0 | -1.38 | 0.28 | 0.02 | — | 3.5 | 0.004 | 0.81 | 0.0 | 0.04 | 13.27 | 0.01 | 2.112 | 15.37 | 0.00 | 6.2 | 93.8 | 0.0 | -1.75 | 1.59 | 0.40 | 0.17 | — | 3214 | 419 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8D9N | 27267 | 2023-04-20 | 2022-06-10 | 4.4 | 4.74 | 3.88 | 34.0 | 0.003 | 0.60 | 0.0 | 0.04 | 13.21 | 0.00 | 2.107 | 2.77 | 0.38 | 5.8 | 94.2 | 0.0 | -0.81 | 0.28 | -0.07 | — | 20.0 | 0.002 | 0.66 | 0.0 | 0.04 | 13.34 | 0.00 | 2.212 | 4.39 | 0.00 | 4.6 | 95.4 | 0.0 | 0.37 | 0.56 | 0.40 | -0.02 | — | 7186 | 902 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6K32 | 9907 | 2023-04-22 | 2019-05-16 | 3.2 | 3.73 | — | 3.8 | 0.009 | 1.22 | 1.0 | 0.07 | 11.49 | 0.01 | 1.345 | 10.22 | 1.25 | 6.3 | 93.3 | 0.3 | -4.88 | 0.28 | 0.72 | 1.49 | 3.7 | 0.004 | 0.78 | 0.0 | 0.05 | 16.38 | 0.00 | 1.254 | 13.10 | 0.77 | 5.7 | 94.2 | 0.0 | -1.38 | 1.36 | 0.31 | 0.82 | 2.33 | 61364 | 7723 | 10 | 8 | 6 | 0 | 0 | logfile |