The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6FU8 | 4319 | 2023-02-16 | 2018-02-26 | 3.2 | 4.43 | 2.98 | 3.8 | 0.013 | 2.11 | 2.0 | 0.10 | 20.18 | 0.02 | 2.617 | 1.47 | 2.78 | 11.2 | 86.2 | 2.5 | -3.87 | 0.17 | 0.42 | 2.23 | 4.1 | 0.004 | 0.85 | 0.0 | 0.04 | 15.02 | 0.00 | 2.243 | 16.86 | 0.00 | 11.2 | 87.5 | 1.2 | -1.85 | 3.09 | 0.23 | 0.62 | -0.89 | 1364 | 82 | 1 | 0 | 0 | 0 | 711 | logfile |
✔ | 6X0V | 21985 | 2023-02-16 | 2020-05-17 | 4.5 | 4.37 | — | 4.4 | 0.003 | 0.62 | 1.0 | 0.04 | 11.58 | 0.00 | 2.285 | 15.16 | 4.48 | 3.5 | 96.0 | 0.5 | -2.45 | 0.40 | 0.74 | — | 4.4 | 0.002 | 0.49 | 0.0 | 0.04 | 12.98 | 0.00 | 2.224 | 17.83 | 0.00 | 5.0 | 95.0 | 0.0 | 2.29 | 1.20 | 0.40 | 0.76 | — | 1384 | 211 | 4 | 0 | 0 | 0 | 62 | logfile |
✔ | 3JBS | 6478 | 2023-02-16 | 2015-10-13 | 2.9 | 3.04 | — | 3.2 | 0.010 | 1.32 | 0.0 | 0.06 | 8.67 | 0.01 | 2.510 | 0.00 | 0.00 | 2.9 | 97.1 | 0.0 | 0.51 | 0.21 | 0.76 | 4.15 | 3.0 | 0.003 | 0.61 | 0.0 | 0.04 | 18.11 | 0.00 | 2.225 | 5.17 | 3.95 | 1.7 | 98.3 | 0.0 | 0.99 | 1.75 | 0.21 | 0.81 | 3.63 | 1401 | 175 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7W3T | 32293 | 2023-02-16 | 2021-11-26 | 3.59 | 2.49 | 3.54 | 2.2 | 0.003 | 0.60 | 0.0 | 0.05 | 13.93 | 0.01 | 2.259 | 8.96 | 0.00 | 4.6 | 95.4 | 0.0 | -2.83 | 0.76 | 0.75 | 4.00 | 2.2 | 0.004 | 0.69 | 0.0 | 0.05 | 15.63 | 0.01 | 2.215 | 13.43 | 0.62 | 6.9 | 93.1 | 0.0 | -3.38 | 0.37 | 0.77 | 0.76 | 3.69 | 1455 | 176 | 3 | 0 | 7 | 0 | 0 | logfile |
✔ | 6R23 | 4708 | 2023-02-16 | 2019-03-15 | 4.9 | 4.57 | — | 4.6 | 0.006 | 1.07 | 0.0 | 0.05 | 16.56 | 0.01 | 2.332 | 7.52 | 0.00 | 7.9 | 92.1 | 0.0 | -4.61 | 0.60 | 0.75 | — | 4.6 | 0.003 | 0.60 | 0.0 | 0.03 | 16.42 | 0.00 | 2.384 | 6.87 | 0.00 | 9.0 | 91.0 | 0.0 | 0.30 | 3.43 | 0.60 | 0.73 | — | 1518 | 182 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ABK | 11698 | 2023-02-16 | 2020-09-07 | 3.6 | 4.10 | 3.49 | 3.9 | 0.004 | 0.66 | 0.0 | 0.04 | 16.30 | 0.00 | 2.315 | 5.67 | 1.23 | 1.5 | 98.5 | 0.0 | 0.91 | 0.28 | 0.87 | 1.10 | 3.9 | 0.004 | 0.67 | 0.0 | 0.03 | 19.79 | 0.00 | 2.278 | 6.30 | 2.47 | 2.1 | 97.9 | 0.0 | 4.42 | 1.32 | 0.28 | 0.86 | 1.35 | 1574 | 196 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6CoZ | 7545 | 2023-02-16 | 2018-03-13 | 3.36 | 4.78 | — | 4.7 | 0.009 | 1.71 | 0.0 | 0.07 | 5.63 | 0.01 | 2.541 | 0.00 | 0.00 | 3.2 | 96.2 | 0.6 | -2.49 | 0.78 | 0.68 | — | 4.4 | 0.003 | 0.85 | 0.0 | 0.04 | 5.41 | 0.00 | 2.334 | 6.19 | 0.00 | 9.6 | 90.4 | 0.0 | -1.73 | 1.59 | 0.82 | 0.77 | — | 1586 | 320 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 5M6S | 3451 | 2023-02-16 | 2016-10-25 | 4.8 | 5.27 | — | 6.5 | 0.005 | 0.84 | 0.0 | 0.04 | 27.97 | 0.00 | 2.447 | 23.24 | 44.05 | 7.3 | 89.6 | 3.1 | -5.37 | 0.01 | 0.04 | — | 5.6 | 0.003 | 0.63 | 0.0 | 0.03 | 18.81 | 0.00 | 1.995 | 10.68 | 0.00 | 6.2 | 93.8 | 0.0 | 2.64 | 2.46 | 0.03 | 0.08 | — | 1593 | 98 | 1 | 0 | 0 | 0 | 793 | logfile |
✔ | 7oG6 | 12879 | 2023-02-16 | 2021-05-06 | 3.3 | 3.47 | — | 2.9 | 0.008 | 0.82 | 0.0 | 0.04 | 17.33 | 0.01 | 2.325 | 7.36 | 6.10 | 9.6 | 90.4 | 0.0 | -4.47 | 0.28 | 0.82 | 2.77 | 2.9 | 0.003 | 0.60 | 0.0 | 0.04 | 16.45 | 0.00 | 2.215 | 10.56 | 0.00 | 6.6 | 93.4 | 0.0 | -0.32 | 0.52 | 0.27 | 0.84 | 3.03 | 1602 | 199 | 2 | 5 | 0 | 0 | 0 | logfile |
✔ | 7V4A | 31705 | 2023-02-16 | 2021-08-12 | 3.2 | 3.19 | — | 3.3 | 0.002 | 0.52 | 0.0 | 0.05 | 14.28 | 0.00 | 2.423 | 8.54 | 0.00 | 7.9 | 92.1 | 0.0 | -5.80 | 0.42 | 0.82 | 3.23 | 3.2 | 0.003 | 0.60 | 0.0 | 0.05 | 16.38 | 0.00 | 2.347 | 6.77 | 0.61 | 11.8 | 88.2 | 0.0 | -3.97 | 1.70 | 0.42 | 0.81 | 3.13 | 1653 | 240 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7USB | 26731 | 2023-02-16 | 2022-04-23 | 3.1 | 3.28 | 3.18 | 3.3 | 0.012 | 1.70 | 0.0 | 0.11 | 10.61 | 0.01 | 2.590 | 1.61 | 1.39 | 5.5 | 94.5 | 0.0 | -0.28 | 0.59 | 0.76 | 5.40 | 3.3 | 0.007 | 0.80 | 0.0 | 0.05 | 13.30 | 0.00 | 2.421 | 5.78 | 0.00 | 6.5 | 93.5 | 0.0 | -1.76 | 1.34 | 0.61 | 0.84 | 5.47 | 1661 | 213 | 3 | 0 | 5 | 0 | 0 | logfile |
✔ | 7QL1 | 14060 | 2023-02-16 | 2021-12-19 | 3.34 | 3.41 | 3.13 | 3.4 | 0.011 | 2.01 | 0.0 | 0.10 | 11.06 | 0.01 | 2.654 | 0.29 | 0.00 | 7.5 | 92.5 | 0.0 | -3.09 | 0.42 | 0.83 | 4.57 | 3.4 | 0.007 | 0.85 | 0.0 | 0.05 | 15.42 | 0.00 | 2.104 | 12.32 | 0.00 | 4.2 | 95.8 | 0.0 | -2.34 | 1.74 | 0.39 | 0.81 | 4.21 | 1671 | 219 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M61 | 23686 | 2023-02-16 | 2021-03-25 | 3.8 | 3.83 | — | 4.1 | 0.005 | 1.01 | 0.0 | 0.08 | 12.79 | 0.00 | 2.218 | 22.02 | 0.00 | 14.3 | 85.7 | 0.0 | -4.63 | 0.49 | 0.73 | 2.45 | 3.9 | 0.004 | 0.80 | 0.0 | 0.05 | 14.85 | 0.00 | 2.106 | 21.09 | 0.00 | 14.3 | 85.7 | 0.0 | -4.66 | 0.84 | 0.48 | 0.75 | 2.97 | 1690 | 230 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 8BG9 | 16027 | 2023-02-16 | 2022-10-27 | 3.5 | 3.74 | 2.80 | 4.2 | 0.008 | 1.46 | 0.0 | 0.09 | 14.96 | 0.01 | 2.484 | 12.17 | 12.50 | 17.1 | 80.0 | 2.9 | -5.16 | 0.38 | 0.79 | 4.51 | 4.0 | 0.006 | 0.76 | 0.0 | 0.05 | 15.60 | 0.00 | 2.264 | 7.60 | 0.00 | 10.5 | 89.5 | 0.0 | -4.03 | 0.99 | 0.39 | 0.81 | 5.60 | 1692 | 222 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QKZ | 14058 | 2023-02-16 | 2021-12-19 | 2.65 | 2.79 | 2.28 | 3.2 | 0.013 | 2.86 | 9.0 | 0.34 | 18.75 | 0.02 | 2.498 | 0.59 | 0.00 | 9.9 | 90.1 | 0.0 | -1.61 | 0.34 | 0.61 | 7.02 | 2.7 | 0.006 | 1.50 | 0.0 | 0.38 | 19.60 | 0.01 | 2.257 | 11.23 | 0.00 | 1.2 | 98.8 | 0.0 | -0.53 | 5.08 | 0.34 | 0.64 | 6.63 | 1701 | 99 | 9 | 0 | 0 | 0 | 891 | logfile |
✔ | 7F29 | 31428 | 2023-02-16 | 2021-06-10 | 3.1 | 3.08 | — | 3.2 | 0.012 | 0.91 | 0.0 | 0.06 | 15.08 | 0.00 | 2.305 | 11.93 | 0.00 | 14.3 | 85.7 | 0.0 | -3.96 | 0.42 | 0.83 | 5.02 | 3.2 | 0.004 | 0.69 | 0.0 | 0.05 | 16.53 | 0.00 | 2.377 | 5.96 | 0.00 | 12.9 | 87.1 | 0.0 | -2.14 | 0.33 | 0.43 | 0.85 | 4.75 | 1794 | 222 | 18 | 0 | 18 | 0 | 0 | logfile |
✔ | 6VW2 | 21410 | 2023-02-16 | 2020-02-18 | 3.4 | 3.62 | — | 3.8 | 0.006 | 1.13 | 0.0 | 0.06 | 14.20 | 0.01 | 2.292 | 24.13 | 0.00 | 27.3 | 72.7 | 0.0 | -4.46 | 0.42 | 0.71 | 2.71 | 3.9 | 0.004 | 0.83 | 0.0 | 0.05 | 14.71 | 0.00 | 2.227 | 13.08 | 0.00 | 15.5 | 84.5 | 0.0 | -4.88 | 0.43 | 0.39 | 0.70 | 1.67 | 1800 | 240 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M64 | 23688 | 2023-02-16 | 2021-03-25 | 4.0 | 4.02 | — | 4.3 | 0.008 | 1.15 | 0.0 | 0.07 | 10.07 | 0.00 | 2.451 | 19.77 | 0.00 | 8.7 | 91.3 | 0.0 | -3.84 | 0.52 | 0.75 | — | 4.3 | 0.003 | 0.87 | 0.0 | 0.04 | 11.23 | 0.00 | 2.241 | 5.93 | 0.00 | 5.2 | 94.8 | 0.0 | -3.94 | 1.14 | 0.51 | 0.74 | — | 1850 | 250 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 7BX7 | 30235 | 2023-02-16 | 2020-04-17 | 2.8 | 2.94 | — | 2.9 | 0.009 | 0.84 | 0.0 | 0.04 | 12.96 | 0.00 | 2.228 | 15.34 | 0.00 | 9.3 | 90.7 | 0.0 | -5.83 | 0.40 | 0.79 | 6.36 | 2.9 | 0.006 | 0.67 | 0.0 | 0.04 | 14.07 | 0.00 | 2.160 | 13.60 | 2.30 | 6.2 | 93.8 | 0.0 | -5.55 | 1.14 | 0.40 | 0.79 | 6.08 | 1896 | 270 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7URM | 26714 | 2023-02-16 | 2022-04-22 | 3.0 | 3.11 | 3.56 | 2.9 | 0.009 | 1.41 | 0.0 | 0.11 | 23.67 | 0.01 | 2.440 | 0.70 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.14 | 0.53 | — | 3.0 | 0.007 | 1.16 | 0.0 | 0.05 | 22.87 | 0.01 | 1.983 | 29.94 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.70 | 0.15 | 0.54 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |