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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7P03 | 13142 | 2023-02-23 | 2021-06-29 | 3.45 | 3.78 | — | 3.7 | 0.006 | 0.68 | 0.0 | 0.04 | 13.86 | 0.00 | 1.801 | 6.52 | 0.00 | 5.4 | 94.6 | 0.0 | -0.70 | 0.62 | 0.71 | 1.37 | 3.7 | 0.004 | 0.57 | 0.0 | 0.04 | 15.79 | 0.00 | 1.838 | 7.56 | 0.17 | 4.4 | 95.6 | 0.0 | 0.48 | 0.89 | 0.64 | 0.78 | 1.93 | 21149 | 1333 | 1 | 0 | 0 | 0 | 10498 | logfile |
✔ | 6JXC | 9893 | 2023-02-21 | 2019-04-23 | 4.1 | 4.20 | — | 4.1 | 0.018 | 1.71 | 0.0 | 0.09 | 8.99 | 0.01 | 2.221 | 4.77 | 0.38 | 9.3 | 87.7 | 3.0 | -1.28 | 0.50 | 0.61 | — | 4.1 | 0.003 | 0.78 | 0.0 | 0.04 | 12.25 | 0.00 | 2.095 | 10.70 | 0.00 | 11.5 | 86.8 | 1.7 | 0.44 | 0.96 | 0.55 | 0.69 | — | 15270 | 2345 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ADJ | 11727 | 2023-02-19 | 2020-09-15 | 2.8 | 3.02 | 2.79 | 3.0 | 0.014 | 1.99 | 4.0 | 0.11 | 14.68 | 0.01 | 2.562 | 0.51 | 0.18 | 6.9 | 93.1 | 0.0 | -2.18 | 0.34 | 0.70 | 3.50 | 3.0 | 0.003 | 0.64 | 0.0 | 0.04 | 17.18 | 0.00 | 2.131 | 7.42 | 2.57 | 7.9 | 92.1 | 0.0 | -1.24 | 1.53 | 0.40 | 0.77 | 2.99 | 9710 | 613 | 1 | 0 | 0 | 0 | 4790 | logfile |
✔ | 6V4D | 21040 | 2023-02-17 | 2019-11-27 | 3.8 | 4.13 | — | 4.1 | 0.007 | 0.90 | 0.0 | 0.06 | 13.63 | 0.01 | 1.752 | 21.24 | 1.35 | 7.0 | 93.0 | 0.0 | -3.84 | 0.49 | 0.80 | 2.10 | 4.1 | 0.003 | 0.85 | 0.0 | 0.04 | 16.59 | 0.00 | 2.082 | 12.48 | 0.68 | 5.3 | 94.7 | 0.0 | -0.62 | 0.65 | 0.47 | 0.78 | 1.50 | 3095 | 422 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 7QFQ | 13947 | 2023-02-19 | 2021-12-06 | 3.6 | 3.83 | 3.58 | 4.0 | 0.002 | 0.54 | 0.0 | 0.04 | 12.93 | 0.00 | 2.177 | 8.31 | 0.00 | 5.4 | 94.6 | 0.0 | -0.70 | 0.65 | 0.70 | 1.50 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10659 | 1291 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RJU | 4906 | 2023-02-16 | 2019-04-29 | 3.2 | 4.49 | 2.14 | 10.0 | 0.007 | 0.93 | 0.0 | 0.05 | 15.36 | 0.00 | 2.423 | 4.52 | 0.00 | 11.6 | 88.4 | 0.0 | -7.10 | 0.22 | -0.01 | -0.80 | 9.8 | 0.003 | 0.63 | 0.0 | 0.03 | 15.97 | 0.00 | 2.424 | 6.03 | 0.00 | 6.2 | 93.8 | 0.0 | -0.13 | 1.31 | 0.27 | 0.05 | 0.48 | 1992 | 131 | 1 | 0 | 0 | 0 | 997 | logfile |
✔ | 7WHN | 32505 | 2023-02-19 | 2021-12-31 | 3.3 | 2.99 | — | 3.2 | 0.009 | 0.80 | 0.0 | 0.05 | 13.81 | 0.01 | 2.147 | 7.64 | 0.10 | 4.5 | 95.5 | 0.0 | -1.29 | 0.41 | 0.83 | 2.92 | 3.2 | 0.002 | 0.49 | 0.0 | 0.04 | 15.00 | 0.00 | 2.281 | 5.42 | 0.10 | 2.7 | 97.3 | 0.0 | 0.94 | 0.40 | 0.37 | 0.82 | 2.21 | 9284 | 1170 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WHM | 32504 | 2023-02-19 | 2021-12-31 | 2.7 | 2.86 | — | 2.8 | 0.006 | 0.64 | 0.0 | 0.05 | 13.85 | 0.00 | 2.155 | 6.30 | 0.00 | 3.1 | 96.9 | 0.0 | 0.15 | 0.43 | 0.87 | 4.68 | 2.8 | 0.003 | 0.51 | 0.0 | 0.04 | 15.95 | 0.00 | 2.260 | 5.62 | 0.56 | 2.3 | 97.7 | 0.0 | 1.45 | 1.11 | 0.40 | 0.84 | 3.69 | 9650 | 1214 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KTV | 23031 | 2023-02-18 | 2020-11-24 | 4.5 | 4.83 | — | 4.5 | 0.006 | 1.06 | 0.0 | 0.06 | 12.50 | 0.01 | 2.221 | 17.73 | 0.12 | 6.5 | 93.5 | 0.0 | -5.20 | 0.80 | 0.79 | — | 6.7 | 0.003 | 0.77 | 0.0 | 0.04 | 13.13 | 0.00 | 2.155 | 19.49 | 0.12 | 3.8 | 96.2 | 0.0 | -0.43 | 0.90 | 0.79 | 0.76 | — | 7577 | 995 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7FAS | 31505 | 2023-02-19 | 2021-07-07 | 3.6 | 2.95 | — | 3.7 | 0.002 | 0.52 | 0.0 | 0.04 | 15.63 | 0.00 | 2.193 | 9.05 | 0.09 | 4.1 | 95.9 | 0.0 | 0.85 | 0.72 | 0.73 | 0.88 | 3.7 | 0.003 | 0.54 | 0.0 | 0.04 | 17.25 | 0.00 | 2.192 | 9.70 | 0.18 | 4.1 | 95.9 | 0.0 | 1.07 | 0.43 | 0.73 | 0.75 | 0.97 | 10173 | 1229 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KTW | 23032 | 2023-02-18 | 2020-11-24 | 4.27 | 4.73 | — | 4.4 | 0.007 | 1.12 | 0.0 | 0.05 | 12.46 | 0.01 | 2.214 | 14.28 | 0.12 | 5.1 | 94.9 | 0.0 | -4.61 | 0.81 | 0.82 | — | 4.4 | 0.003 | 0.80 | 0.0 | 0.04 | 13.32 | 0.00 | 2.163 | 18.78 | 0.12 | 3.4 | 96.6 | 0.0 | 0.23 | 0.96 | 0.80 | 0.79 | — | 7577 | 995 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8H8B | 34541 | 2023-02-18 | 2022-10-22 | 3.16 | 3.37 | 3.20 | 3.3 | 0.001 | 0.46 | 0.0 | 0.04 | 13.00 | 0.00 | 2.226 | 6.42 | 0.67 | 6.3 | 93.7 | 0.0 | -2.99 | 0.70 | 0.76 | 2.74 | 3.3 | 0.003 | 0.62 | 0.0 | 0.04 | 15.26 | 0.00 | 2.256 | 6.60 | 0.34 | 9.5 | 90.5 | 0.0 | -1.76 | 0.61 | 0.74 | 0.85 | 3.67 | 8344 | 1027 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KTT | 23029 | 2023-02-18 | 2020-11-24 | 4.17 | 4.46 | — | 4.2 | 0.007 | 1.04 | 0.0 | 0.06 | 13.23 | 0.01 | 2.239 | 12.66 | 0.25 | 5.7 | 94.3 | 0.0 | -5.41 | 0.81 | 0.78 | — | 4.2 | 0.003 | 0.73 | 0.0 | 0.04 | 13.82 | 0.00 | 2.116 | 20.56 | 0.00 | 3.3 | 96.7 | 0.0 | 0.00 | 0.67 | 0.81 | 0.76 | — | 7568 | 994 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V0X | 26952 | 2023-02-17 | 2022-05-11 | 3.0 | 2.83 | 2.92 | 2.9 | 0.002 | 0.63 | 0.0 | 0.04 | 19.06 | 0.01 | 2.211 | 6.52 | 5.05 | 4.0 | 96.0 | 0.0 | 0.72 | 0.61 | 0.88 | 3.78 | 2.9 | 0.002 | 0.53 | 0.0 | 0.04 | 19.08 | 0.00 | 2.176 | 7.23 | 4.38 | 4.9 | 95.1 | 0.0 | 1.77 | 0.47 | 0.60 | 0.88 | 3.17 | 2818 | 375 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JGD | 22323 | 2023-02-23 | 2020-07-19 | 3.38 | 3.68 | — | 3.6 | 0.002 | 0.43 | 0.0 | 0.05 | 12.94 | 0.00 | 2.123 | 11.45 | 0.00 | 3.9 | 96.1 | 0.0 | 1.18 | 0.61 | 0.66 | 2.22 | 3.6 | 0.003 | 0.53 | 0.0 | 0.05 | 14.82 | 0.00 | 2.054 | 14.21 | 0.08 | 7.3 | 92.7 | 0.0 | 0.43 | 0.52 | 0.63 | 0.71 | 1.77 | 20292 | 1435 | 1 | 0 | 0 | 0 | 8505 | logfile |
✔ | 7UVT | 26816 | 2023-02-20 | 2022-05-02 | 3.9 | 4.17 | 4.00 | 4.1 | 0.001 | 0.41 | 0.0 | 0.02 | 16.13 | 0.00 | 1.897 | 6.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.76 | 0.74 | — | 4.1 | 0.006 | 0.70 | 0.0 | 0.04 | 17.94 | 0.01 | 1.892 | 21.35 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.48 | 0.77 | 0.76 | — | 12409 | 0 | 1 | 386 | 0 | 0 | 4149 | logfile |
✔ | 7KTU | 23030 | 2023-02-18 | 2020-11-24 | 4.15 | 4.49 | — | 4.2 | 0.006 | 1.05 | 0.0 | 0.05 | 12.61 | 0.01 | 2.259 | 12.91 | 0.37 | 4.3 | 95.7 | 0.0 | -5.35 | 0.81 | 0.79 | — | 4.2 | 0.003 | 0.79 | 0.0 | 0.04 | 13.23 | 0.00 | 2.086 | 18.78 | 0.00 | 3.4 | 96.6 | 0.0 | -0.16 | 0.95 | 0.80 | 0.76 | — | 7577 | 995 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7W88 | 32353 | 2023-02-18 | 2021-12-07 | 3.5 | 3.65 | — | 3.6 | 0.003 | 0.71 | 0.0 | 0.04 | 16.87 | 0.00 | 2.225 | 15.22 | 8.23 | 15.2 | 84.8 | 0.0 | -5.15 | 0.70 | 0.69 | 1.82 | 3.6 | 0.003 | 0.75 | 0.0 | 0.04 | 17.22 | 0.00 | 2.213 | 16.06 | 0.64 | 15.3 | 84.7 | 0.0 | -3.13 | 0.94 | 0.70 | 0.69 | 1.73 | 7138 | 896 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7B54 | 12018 | 2023-02-21 | 2020-12-03 | 3.1 | 3.96 | — | 3.6 | 0.005 | 0.77 | 0.0 | 0.04 | 14.53 | 0.00 | 2.081 | 15.09 | 0.19 | 12.5 | 87.1 | 0.4 | -1.25 | 0.82 | 0.83 | 1.99 | 3.6 | 0.004 | 0.69 | 0.0 | 0.04 | 15.77 | 0.00 | 2.146 | 12.53 | 0.13 | 11.8 | 87.8 | 0.4 | -0.68 | 0.35 | 0.81 | 0.82 | 1.43 | 14148 | 1732 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NNH | 12477 | 2023-02-17 | 2021-02-24 | 4.0 | 5.15 | — | 4.2 | 0.004 | 1.27 | 0.0 | 0.05 | 15.82 | 0.01 | 2.066 | 35.16 | 0.34 | 23.0 | 76.5 | 0.5 | -3.61 | 0.74 | 0.80 | — | 4.2 | 0.003 | 1.12 | 0.0 | 0.05 | 16.96 | 0.01 | 2.116 | 27.42 | 0.34 | 20.2 | 79.5 | 0.3 | -2.65 | 0.71 | 0.74 | 0.79 | — | 5299 | 637 | 1 | 0 | 0 | 0 | 0 | logfile |