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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6KFK | 9974 | 2022-05-13 | 2019-07-08 | 4.1 | 4.28 | — | 15.0 | 0.015 | 1.99 | 0.0 | 0.08 | 10.94 | 0.01 | 1.444 | 20.30 | 0.00 | 8.2 | 89.5 | 2.2 | -1.03 | 0.14 | 0.06 | — | 4.2 | 0.004 | 0.96 | 0.0 | 0.05 | 12.82 | 0.00 | 2.072 | 21.35 | 0.00 | 8.3 | 90.8 | 0.9 | -1.45 | 2.85 | 0.24 | 0.31 | — | 65076 | 8844 | 22 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EGC | 31112 | 2022-05-13 | 2021-03-24 | 3.9 | 3.72 | — | 4.9 | 0.008 | 1.13 | 76.0 | 0.08 | 15.44 | 0.01 | 1.402 | 24.43 | 3.39 | 7.3 | 91.9 | 0.8 | -3.59 | 0.43 | 0.10 | 0.10 | 3.1 | 0.006 | 0.91 | 1.0 | 0.05 | 16.75 | 0.01 | 1.954 | 17.50 | 0.48 | 6.4 | 93.4 | 0.2 | -0.89 | 1.24 | 0.51 | 0.32 | 0.53 | 113129 | 13879 | 63 | 142 | 18 | 0 | 0 | logfile |
✔ | 7PC2 | 13316 | 2022-05-15 | 2021-08-03 | 2.8 | 3.39 | — | 6.5 | 0.033 | 1.53 | 5.0 | 0.05 | 15.16 | 0.01 | 1.809 | 9.01 | 1.49 | 7.8 | 92.2 | 0.0 | -3.81 | 0.43 | 0.05 | -0.14 | 2.9 | 0.014 | 1.28 | 3.0 | 0.05 | 16.66 | 0.01 | 1.526 | 28.54 | 2.98 | 8.1 | 91.9 | 0.0 | -1.71 | 1.41 | 0.57 | 0.35 | 0.46 | 27063 | 3093 | 68 | 0 | 210 | 0 | 0 | logfile |
✔ | 6C9Y | 7438 | 2022-05-16 | 2018-01-29 | 4.25 | 4.33 | — | 9.7 | 0.008 | 1.53 | 5.0 | 0.08 | 13.66 | 0.01 | 2.064 | 6.66 | 5.32 | 7.8 | 90.7 | 1.5 | -4.02 | 0.50 | 0.12 | — | 4.1 | 0.004 | 0.83 | 0.0 | 0.05 | 13.52 | 0.01 | 2.106 | 21.09 | 0.03 | 7.0 | 92.9 | 0.1 | -1.54 | 2.44 | 0.61 | 0.39 | — | 28920 | 3685 | 7 | 0 | 3 | 0 | 0 | logfile |
✔ | 3JCD | 6549 | 2022-05-20 | 2015-12-01 | 3.7 | 5.07 | — | 19.0 | 0.006 | 0.83 | 0.0 | 0.04 | 14.69 | 0.00 | 1.289 | 14.69 | 0.02 | 9.6 | 85.8 | 4.5 | -2.43 | 0.34 | 0.04 | 0.30 | 3.4 | 0.007 | 1.25 | 0.0 | 0.06 | 19.90 | 0.01 | 1.449 | 58.45 | 0.37 | 16.4 | 82.3 | 1.3 | -4.16 | 2.42 | 0.69 | 0.40 | 0.16 | 147815 | 5982 | 57 | 4715 | 0 | 0 | 0 | logfile |
✔ | 6EU1 | 3956 | 2022-05-17 | 2017-10-27 | 3.4 | 3.40 | — | 6.6 | 0.005 | 1.13 | 0.0 | 0.06 | 12.93 | 0.01 | 1.732 | 6.56 | 0.50 | 16.1 | 83.5 | 0.4 | -5.70 | 0.20 | 0.01 | 0.29 | 3.3 | 0.013 | 1.36 | 3.0 | 0.05 | 16.40 | 0.01 | 1.726 | 25.40 | 0.21 | 17.8 | 81.9 | 0.3 | -4.08 | 2.02 | 0.48 | 0.41 | 0.16 | 40547 | 5012 | 24 | 43 | 7 | 0 | 0 | logfile |
✔ | 7NK1 | 12428 | 2022-05-16 | 2021-02-17 | 4.22 | 4.30 | — | 4.0 | 0.004 | 0.69 | 0.0 | 0.04 | 13.56 | 0.01 | 1.907 | 9.03 | 0.19 | 4.3 | 95.7 | 0.0 | -0.71 | 0.46 | 0.19 | — | 4.4 | 0.011 | 1.01 | 1.0 | 0.04 | 14.16 | 0.01 | 1.847 | 23.47 | 0.00 | 6.4 | 93.6 | 0.0 | -1.30 | 1.60 | 0.62 | 0.41 | — | 28747 | 1791 | 6 | 23 | 0 | 0 | 13868 | logfile |
✔ | 5L3P | 4001 | 2022-05-21 | 2016-05-24 | 3.7 | 4.66 | — | 16.0 | 0.006 | 0.60 | 0.0 | 0.19 | 12.42 | 0.02 | 2.115 | 7.26 | 0.00 | 8.2 | 89.4 | 2.4 | -1.95 | 0.44 | 0.11 | 0.16 | 3.9 | 0.009 | 1.22 | 4.0 | 0.05 | 18.03 | 0.01 | 1.651 | 53.10 | 0.21 | 10.9 | 88.4 | 0.7 | -2.75 | 2.46 | 0.66 | 0.41 | 0.07 | 149606 | 6419 | 58 | 4704 | 76 | 0 | 0 | logfile |
✔ | 7APK | 11857 | 2022-05-15 | 2020-10-17 | 3.3 | 3.26 | — | 3.5 | 0.004 | 0.81 | 0.0 | 0.05 | 8.50 | 0.01 | 2.256 | 4.14 | 0.10 | 4.7 | 95.2 | 0.1 | -2.73 | 0.41 | 0.22 | 0.13 | 2.9 | 0.007 | 0.84 | 1.0 | 0.04 | 12.90 | 0.00 | 1.695 | 14.03 | 0.09 | 5.7 | 94.1 | 0.1 | 1.02 | 1.04 | 0.49 | 0.42 | 0.88 | 72697 | 9893 | 30 | 0 | 74 | 0 | 0 | logfile |
✔ | 3KTT | 5148 | 2022-05-12 | 2009-11-25 | 4.0 | 2.33 | — | 4.5 | 0.020 | 2.86 | 20.0 | 0.20 | 15.20 | 0.01 | 1.652 | 180.45 | 7.82 | 6.3 | 89.4 | 4.3 | -0.59 | 0.27 | 0.28 | — | 1.9 | 0.006 | 1.32 | 0.0 | 0.06 | 17.22 | 0.01 | 2.001 | 37.19 | 1.22 | 10.2 | 88.6 | 1.2 | -2.54 | 1.70 | 0.31 | 0.43 | — | 3855 | 513 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WoT | 32658 | 2022-05-16 | 2022-01-22 | 3.73 | 4.26 | — | 3.8 | 0.010 | 1.69 | 284.0 | 0.10 | 15.82 | 0.01 | 1.016 | 24.11 | 4.41 | 9.4 | 88.4 | 2.2 | -3.07 | 0.49 | 0.33 | 0.06 | 3.9 | 0.006 | 0.93 | 1.0 | 0.04 | 16.41 | 0.01 | 1.532 | 19.86 | 0.14 | 8.7 | 91.0 | 0.3 | -0.79 | 1.03 | 0.55 | 0.43 | 0.21 | 133827 | 17285 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Woo | 32653 | 2022-05-14 | 2022-01-22 | 3.71 | 4.08 | — | 3.9 | 0.010 | 1.69 | 139.0 | 0.10 | 15.86 | 0.01 | 1.041 | 23.20 | 4.33 | 9.3 | 88.5 | 2.2 | -3.11 | 0.47 | 0.44 | 0.31 | 3.9 | 0.003 | 0.81 | 0.0 | 0.04 | 16.47 | 0.00 | 2.074 | 14.80 | 0.32 | 8.3 | 91.4 | 0.3 | -0.41 | 1.64 | 0.48 | 0.44 | 0.13 | 66949 | 8644 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7FG3 | 31577 | 2022-05-13 | 2021-07-25 | 3.9 | 3.62 | — | 4.0 | 0.006 | 1.13 | 0.0 | 0.06 | 14.47 | 0.01 | 1.929 | 37.34 | 0.00 | 18.5 | 80.8 | 0.7 | -4.60 | 0.22 | 0.47 | -0.27 | 4.0 | 0.009 | 0.98 | 0.0 | 0.05 | 16.79 | 0.01 | 2.094 | 24.09 | 0.30 | 15.7 | 83.7 | 0.6 | -3.71 | 0.78 | 0.23 | 0.45 | 0.29 | 9054 | 1166 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 1oED | 1044 | 2022-05-12 | 2003-03-24 | 4.0 | 3.94 | — | 10.4 | 0.014 | 2.29 | 3.0 | 0.10 | 17.23 | 0.01 | 1.183 | 225.04 | 19.76 | 5.2 | 92.7 | 2.1 | -3.67 | 0.39 | 0.18 | — | 9.0 | 0.004 | 1.03 | 0.0 | 0.05 | 15.86 | 0.01 | 2.151 | 21.91 | 0.52 | 2.1 | 97.9 | 0.0 | 1.73 | 2.85 | 0.63 | 0.45 | — | 4926 | 636 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JGF | 22325 | 2022-05-12 | 2020-07-19 | 4.69 | 4.81 | — | 4.8 | 0.002 | 0.62 | 0.0 | 0.04 | 13.16 | 0.01 | 2.109 | 26.85 | 0.41 | 4.6 | 95.4 | 0.0 | -0.87 | 0.39 | 0.43 | — | 4.8 | 0.002 | 0.48 | 0.0 | 0.04 | 13.28 | 0.00 | 2.151 | 52.69 | 0.41 | 5.2 | 94.8 | 0.0 | 1.10 | 0.63 | 0.41 | 0.45 | — | 4477 | 532 | 1 | 0 | 0 | 0 | 30 | logfile |
✔ | 7LVT | 23542 | 2022-05-14 | 2021-02-26 | 4.6 | 4.32 | — | 4.0 | 0.008 | 1.36 | 3.0 | 0.09 | 13.04 | 0.01 | 2.057 | 6.46 | 0.96 | 6.4 | 93.3 | 0.3 | -2.96 | 0.68 | 0.65 | — | 3.8 | 0.003 | 0.74 | 0.0 | 0.04 | 12.83 | 0.00 | 2.126 | 11.78 | 0.00 | 5.5 | 94.3 | 0.1 | 0.09 | 16.94 | 0.56 | 0.46 | — | 18944 | 2876 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JGJ | 22328 | 2022-05-13 | 2020-07-19 | 4.8 | 7.06 | — | 6.5 | 0.013 | 2.22 | 17.0 | 0.31 | 17.49 | 0.01 | 1.656 | 7.23 | 12.68 | 7.2 | 91.6 | 1.2 | -2.09 | 0.88 | 0.68 | — | 6.5 | 0.003 | 0.76 | 0.0 | 0.04 | 13.54 | 0.00 | 2.130 | 27.09 | 0.00 | 7.7 | 92.2 | 0.1 | -2.19 | 1.26 | 0.84 | 0.48 | — | 13324 | 1707 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6EU2 | 3957 | 2022-05-17 | 2017-10-27 | 3.4 | 3.45 | — | 6.0 | 0.004 | 1.04 | 0.0 | 0.06 | 11.35 | 0.01 | 1.787 | 5.07 | 0.40 | 13.0 | 86.5 | 0.5 | -5.22 | 0.27 | 0.04 | 0.18 | 3.4 | 0.011 | 1.17 | 3.0 | 0.05 | 15.41 | 0.01 | 1.507 | 19.10 | 0.26 | 11.6 | 88.1 | 0.3 | -2.77 | 1.48 | 0.55 | 0.48 | 0.07 | 38329 | 4825 | 22 | 0 | 7 | 0 | 0 | logfile |
✔ | 6H05 | 0108 | 2022-05-17 | 2018-07-06 | 2.9 | 3.15 | — | 3.5 | 0.016 | 1.09 | 0.0 | 0.07 | 9.74 | 0.01 | 0.426 | 17.81 | 0.00 | 8.5 | 91.5 | 0.0 | -5.50 | 0.36 | 0.13 | 0.50 | 3.1 | 0.007 | 1.02 | 0.0 | 0.05 | 15.81 | 0.01 | 1.535 | 23.05 | 2.30 | 5.2 | 94.8 | 0.0 | -1.96 | 1.64 | 0.58 | 0.48 | 0.74 | 44544 | 5664 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 7K8D | 22728 | 2022-05-13 | 2020-09-26 | 4.33 | 4.48 | — | 4.7 | 0.004 | 1.12 | 0.0 | 0.06 | 12.53 | 0.01 | 2.205 | 23.61 | 1.86 | 4.3 | 95.7 | 0.0 | -2.98 | 0.33 | 0.40 | — | 4.7 | 0.003 | 0.83 | 0.0 | 0.04 | 13.33 | 0.01 | 2.120 | 13.72 | 0.00 | 4.3 | 95.7 | 0.0 | 0.70 | 1.45 | 0.41 | 0.49 | — | 5529 | 725 | 1 | 0 | 0 | 0 | 0 | logfile |