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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8CTG | 26989 | 2023-12-07 | 2022-05-14 | 3.8 | 3.16 | 3.72 | 3.3 | 0.004 | 0.98 | 0.0 | 0.05 | 7.62 | 0.01 | 2.113 | 12.33 | 6.90 | 9.7 | 88.5 | 1.8 | -3.04 | 0.57 | 0.35 | -0.17 | 2.3 | 0.004 | 0.91 | 0.0 | 0.04 | 7.56 | 0.00 | 2.231 | 7.59 | 1.15 | 15.0 | 84.8 | 0.2 | -3.09 | 2.07 | 0.60 | 0.45 | 1.92 | 5100 | 1006 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 7JGF | 22325 | 2023-12-07 | 2020-07-19 | 4.69 | 4.81 | — | 4.8 | 0.002 | 0.62 | 0.0 | 0.04 | 13.16 | 0.01 | 2.109 | 26.74 | 0.41 | 4.6 | 95.4 | 0.0 | -0.87 | 0.39 | 0.43 | — | 4.8 | 0.002 | 0.47 | 0.0 | 0.04 | 13.18 | 0.00 | 2.190 | 46.28 | 0.41 | 4.8 | 95.2 | 0.0 | 1.10 | 0.62 | 0.41 | 0.45 | — | 4477 | 532 | 1 | 0 | 0 | 0 | 30 | logfile |
✔ | 1oED | 1044 | 2023-12-07 | 2003-03-24 | 4.0 | 3.94 | — | 10.4 | 0.014 | 2.29 | 3.0 | 0.10 | 17.23 | 0.01 | 1.183 | 224.94 | 19.76 | 5.2 | 92.7 | 2.1 | -3.67 | 0.39 | 0.18 | — | 9.0 | 0.004 | 1.06 | 0.0 | 0.05 | 15.88 | 0.01 | 2.224 | 22.69 | 0.69 | 2.3 | 97.7 | 0.0 | 1.70 | 2.92 | 0.63 | 0.45 | — | 4926 | 636 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7FG3 | 31577 | 2023-12-08 | 2021-07-25 | 3.9 | 3.62 | — | 4.0 | 0.006 | 1.13 | 0.0 | 0.06 | 14.47 | 0.01 | 1.929 | 37.29 | 0.00 | 18.5 | 80.8 | 0.7 | -4.60 | 0.22 | 0.47 | -0.27 | 4.0 | 0.004 | 0.92 | 0.0 | 0.05 | 16.64 | 0.01 | 2.088 | 24.71 | 0.10 | 15.3 | 84.1 | 0.5 | -3.68 | 0.78 | 0.23 | 0.45 | 0.35 | 9054 | 1166 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8F7J | 28905 | 2023-12-07 | 2022-11-18 | 4.32 | 4.45 | 4.63 | 8.9 | 0.005 | 0.92 | 0.0 | 0.05 | 15.44 | 0.01 | 2.282 | 15.12 | 0.26 | 5.7 | 94.3 | 0.0 | -3.18 | 0.38 | 0.32 | — | 4.3 | 0.004 | 0.80 | 0.0 | 0.04 | 13.92 | 0.01 | 2.122 | 24.96 | 0.00 | 9.4 | 90.6 | 0.0 | -3.21 | 2.94 | 0.44 | 0.45 | — | 3321 | 407 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8GH8 | 40036 | 2023-12-08 | 2023-03-09 | 4.3 | 4.08 | 3.85 | 4.0 | 0.004 | 0.79 | 0.0 | 0.05 | 26.60 | 0.01 | 2.219 | 10.05 | 0.23 | 12.7 | 86.8 | 0.5 | -3.65 | 0.48 | 0.44 | — | 4.0 | 0.003 | 0.69 | 0.0 | 0.04 | 26.15 | 0.01 | 2.303 | 9.20 | 0.00 | 12.2 | 87.7 | 0.2 | -3.73 | 1.06 | 0.50 | 0.47 | — | 6991 | 559 | 8 | 136 | 0 | 0 | 0 | logfile |
✔ | 8E4C | 27888 | 2023-12-08 | 2022-08-18 | 4.0 | 3.22 | 3.15 | 3.1 | 0.005 | 0.84 | 2.0 | 0.07 | 16.28 | 0.01 | 2.251 | 7.49 | 1.84 | 6.1 | 93.9 | 0.0 | -0.24 | 0.48 | 0.49 | — | 3.1 | 0.003 | 0.75 | 0.0 | 0.05 | 17.15 | 0.01 | 2.097 | 15.37 | 0.42 | 5.8 | 94.2 | 0.0 | -0.53 | 1.32 | 0.48 | 0.47 | — | 6398 | 805 | 6 | 0 | 5 | 0 | 0 | logfile |
✔ | 7K8D | 22728 | 2023-12-09 | 2020-09-26 | 4.33 | 4.48 | — | 4.7 | 0.004 | 1.12 | 0.0 | 0.06 | 12.53 | 0.01 | 2.205 | 23.61 | 1.86 | 4.3 | 95.7 | 0.0 | -2.98 | 0.33 | 0.40 | — | 4.6 | 0.003 | 0.80 | 0.0 | 0.04 | 13.50 | 0.01 | 2.094 | 15.68 | 0.00 | 4.9 | 95.1 | 0.0 | 0.82 | 1.46 | 0.41 | 0.49 | — | 5529 | 725 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JGJ | 22328 | 2023-12-10 | 2020-07-19 | 4.8 | 7.06 | — | 6.5 | 0.013 | 2.22 | 17.0 | 0.31 | 17.49 | 0.01 | 1.656 | 7.23 | 12.68 | 7.2 | 91.6 | 1.2 | -2.09 | 0.88 | 0.68 | — | 6.5 | 0.003 | 0.75 | 0.0 | 0.04 | 13.51 | 0.00 | 2.045 | 26.33 | 0.07 | 7.2 | 92.7 | 0.1 | -2.02 | 1.26 | 0.84 | 0.49 | — | 13324 | 1707 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ENR | 28277 | 2023-12-08 | 2022-09-30 | 3.8 | 4.03 | 4.04 | 4.3 | 0.004 | 0.80 | 0.0 | 0.05 | 14.88 | 0.00 | 2.204 | 17.13 | 0.89 | 0.7 | 99.3 | 0.0 | 1.04 | 0.43 | 0.37 | 0.94 | 4.2 | 0.006 | 1.02 | 0.0 | 0.05 | 17.01 | 0.00 | 2.100 | 30.96 | 0.60 | 12.7 | 87.3 | 0.0 | -3.56 | 2.50 | 0.51 | 0.49 | 2.35 | 6392 | 888 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MDW | 23782 | 2023-12-07 | 2021-04-06 | 3.58 | 2.25 | 3.45 | 1.5 | 0.002 | 0.55 | 0.0 | 0.04 | 12.68 | 0.00 | 2.293 | 8.46 | 0.00 | 6.5 | 93.5 | 0.0 | -1.58 | 0.52 | 0.44 | 1.65 | 1.5 | 0.004 | 0.68 | 0.0 | 0.05 | 14.93 | 0.00 | 2.201 | 17.83 | 0.85 | 10.7 | 89.3 | 0.0 | -3.01 | 1.35 | 0.55 | 0.49 | 1.65 | 3392 | 435 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 8ENQ | 28276 | 2023-12-07 | 2022-09-30 | 3.6 | 3.97 | 3.73 | 4.4 | 0.004 | 0.77 | 0.0 | 0.05 | 13.93 | 0.00 | 2.257 | 14.40 | 0.00 | 0.3 | 99.7 | 0.0 | 1.45 | 0.35 | 0.32 | 1.15 | 4.2 | 0.005 | 1.02 | 0.0 | 0.05 | 15.82 | 0.00 | 2.119 | 29.27 | 0.85 | 14.4 | 85.6 | 0.0 | -4.27 | 2.00 | 0.43 | 0.49 | 3.67 | 5593 | 777 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DGi | 27423 | 2023-12-10 | 2022-06-23 | 3.94 | 4.27 | 4.04 | 4.1 | 0.005 | 1.16 | 4.0 | 0.06 | 15.93 | 0.01 | 2.263 | 8.89 | 0.67 | 5.9 | 93.8 | 0.3 | -2.32 | 0.67 | 0.52 | 0.27 | 4.1 | 0.003 | 0.75 | 0.0 | 0.04 | 16.38 | 0.00 | 2.110 | 20.11 | 0.53 | 6.1 | 93.8 | 0.1 | -0.44 | 0.60 | 0.66 | 0.51 | 0.27 | 13580 | 1690 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oTi | 13060 | 2023-12-08 | 2021-06-10 | 4.2 | 4.80 | — | 7.9 | 0.014 | 1.99 | 12.0 | 0.10 | 16.95 | 0.02 | 2.507 | 0.59 | 4.71 | 10.8 | 87.9 | 1.4 | -3.63 | 0.36 | 0.23 | — | 4.9 | 0.003 | 0.86 | 0.0 | 0.04 | 14.40 | 0.00 | 2.119 | 20.52 | 0.00 | 7.2 | 92.3 | 0.5 | -1.27 | 1.77 | 0.52 | 0.51 | — | 9171 | 1182 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CEo | 16611 | 2023-12-09 | 2023-02-02 | 3.6 | 3.26 | 3.48 | 2.9 | 0.004 | 0.75 | 1.0 | 0.05 | 16.42 | 0.01 | 2.091 | 6.70 | 0.00 | 2.9 | 97.1 | 0.0 | -0.68 | 0.73 | 0.56 | 1.54 | 2.9 | 0.007 | 0.71 | 0.0 | 0.04 | 17.82 | 0.00 | 1.837 | 15.77 | 0.16 | 3.5 | 96.5 | 0.0 | 0.35 | 0.67 | 0.68 | 0.52 | 1.47 | 113584 | 13074 | 66 | 418 | 19 | 0 | 0 | logfile |
✔ | 7Z0L | 14427 | 2023-12-10 | 2022-02-23 | 4.0 | 4.43 | 4.11 | 4.3 | 0.005 | 0.95 | 0.0 | 0.06 | 15.67 | 0.01 | 2.223 | 7.63 | 0.65 | 5.5 | 94.5 | 0.0 | -0.67 | 0.58 | 0.49 | — | 4.4 | 0.003 | 0.67 | 0.0 | 0.04 | 14.89 | 0.00 | 2.126 | 12.52 | 0.52 | 4.5 | 95.5 | 0.0 | 0.39 | 0.96 | 0.59 | 0.52 | — | 13752 | 856 | 9 | 0 | 12 | 0 | 6713 | logfile |
✔ | 3JC2 | 3245 | 2023-12-07 | 2015-11-15 | 3.6 | 3.58 | 3.97 | 3.7 | 0.012 | 1.63 | 2.0 | 0.08 | 14.90 | 0.01 | 1.175 | 18.51 | 7.32 | 11.5 | 84.5 | 4.0 | -4.52 | 0.22 | 0.59 | 1.48 | 3.6 | 0.004 | 0.86 | 0.0 | 0.04 | 17.18 | 0.00 | 2.128 | 14.33 | 0.49 | 7.4 | 91.9 | 0.6 | -1.41 | 3.32 | 0.24 | 0.53 | 1.66 | 3911 | 482 | 4 | 0 | 32 | 0 | 0 | logfile |
✔ | 7NCH | 12266 | 2023-12-09 | 2021-01-28 | 3.84 | 3.76 | 3.69 | 3.8 | 0.013 | 1.61 | 2.0 | 0.10 | 14.68 | 0.00 | 2.485 | 0.00 | 0.19 | 9.4 | 90.6 | 0.0 | -3.70 | 0.60 | 0.45 | 2.36 | 3.8 | 0.003 | 0.73 | 2.0 | 0.05 | 15.61 | 0.00 | 1.927 | 11.18 | 0.19 | 14.2 | 85.8 | 0.0 | -4.48 | 1.66 | 0.65 | 0.53 | 2.28 | 11292 | 816 | 12 | 0 | 0 | 0 | 5796 | logfile |
✔ | 7JLX | 22383 | 2023-12-07 | 2020-07-30 | 4.6 | 3.86 | — | 3.7 | 0.001 | 0.42 | 0.0 | 0.04 | 3.80 | 0.00 | 2.240 | 2.96 | 0.00 | 6.7 | 93.3 | 0.0 | 1.23 | 0.54 | 0.51 | — | 3.8 | 0.003 | 0.75 | 0.0 | 0.04 | 7.17 | 0.00 | 2.306 | 8.03 | 0.00 | 17.7 | 82.3 | 0.0 | -2.25 | 2.42 | 0.48 | 0.53 | — | 3288 | 664 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DRo | 27679 | 2023-12-08 | 2022-07-21 | 4.06 | 4.13 | 4.38 | 4.1 | 0.004 | 0.96 | 0.0 | 0.05 | 15.27 | 0.01 | 2.265 | 14.83 | 0.40 | 7.3 | 92.7 | 0.0 | -3.39 | 0.46 | 0.53 | — | 4.1 | 0.003 | 0.83 | 0.0 | 0.05 | 13.69 | 0.01 | 2.116 | 23.12 | 0.00 | 9.9 | 90.1 | 0.0 | -2.68 | 2.67 | 0.46 | 0.53 | — | 6642 | 814 | 2 | 0 | 0 | 0 | 0 | logfile |