The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6WKT | 21708 | 2023-12-07 | 2020-04-16 | 3.4 | 3.21 | 3.09 | 3.3 | 0.004 | 0.81 | 0.0 | 0.05 | 13.97 | 0.01 | 2.329 | 0.00 | 0.00 | 1.9 | 98.1 | 0.0 | -3.42 | 0.65 | 0.75 | 3.69 | 3.3 | 0.003 | 0.57 | 0.0 | 0.03 | 16.11 | 0.00 | 2.212 | 10.95 | 0.00 | 4.8 | 95.2 | 0.0 | 3.85 | 1.35 | 0.64 | 0.76 | 3.76 | 3152 | 424 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8SRP | 40737 | 2023-12-09 | 2023-05-05 | 3.7 | 3.93 | 3.67 | 3.7 | 0.004 | 0.66 | 0.0 | 0.03 | 28.75 | 0.01 | 2.262 | 9.34 | 0.47 | 6.5 | 93.5 | 0.0 | -1.47 | 0.74 | 0.72 | 2.00 | 3.7 | 0.003 | 0.62 | 0.0 | 0.03 | 28.34 | 0.00 | 2.203 | 10.19 | 1.40 | 6.9 | 93.1 | 0.0 | -0.18 | 0.91 | 0.74 | 0.71 | 2.45 | 9516 | 849 | 14 | 214 | 0 | 0 | 0 | logfile |
✔ | 7VBM | 31882 | 2023-12-09 | 2021-08-31 | 3.4 | 2.78 | — | 3.1 | 0.005 | 0.75 | 1.0 | 0.04 | 28.39 | 0.01 | 2.221 | 6.15 | 0.18 | 2.0 | 98.0 | 0.0 | 1.47 | 0.68 | 0.78 | 2.79 | 3.1 | 0.003 | 0.56 | 0.0 | 0.03 | 28.73 | 0.00 | 2.216 | 7.11 | 0.18 | 1.7 | 98.3 | 0.0 | 2.64 | 0.28 | 0.68 | 0.80 | 2.03 | 10475 | 677 | 10 | 252 | 0 | 0 | 0 | logfile |
✔ | 7WLR | 32591 | 2023-12-09 | 2022-01-13 | 3.54 | 3.36 | — | 3.5 | 0.006 | 0.88 | 0.0 | 0.05 | 29.27 | 0.01 | 2.232 | 3.15 | 0.00 | 1.8 | 98.2 | 0.0 | 1.65 | 0.69 | 0.75 | 2.27 | 3.5 | 0.004 | 0.56 | 0.0 | 0.03 | 28.22 | 0.00 | 2.188 | 6.72 | 0.16 | 1.9 | 98.1 | 0.0 | 2.95 | 1.21 | 0.78 | 0.83 | 2.29 | 11922 | 754 | 10 | 290 | 0 | 0 | 0 | logfile |
✔ | 8iBY | 35349 | 2023-12-09 | 2023-02-10 | 3.47 | 3.81 | 3.66 | 3.7 | 0.003 | 0.62 | 0.0 | 0.03 | 23.00 | 0.01 | 2.187 | 11.40 | 0.00 | 4.6 | 95.3 | 0.1 | 0.06 | 0.77 | 0.76 | 1.66 | 3.7 | 0.002 | 0.60 | 0.0 | 0.03 | 22.96 | 0.00 | 2.188 | 10.87 | 0.30 | 3.7 | 96.2 | 0.1 | 0.39 | 1.59 | 0.75 | 0.73 | 1.66 | 10503 | 793 | 3 | 198 | 1 | 0 | 0 | logfile |
✔ | 8H1J | 34428 | 2023-12-07 | 2022-10-03 | 3.1 | 3.36 | 3.20 | 3.3 | 0.005 | 0.53 | 0.0 | 0.03 | 21.48 | 0.00 | 2.232 | 8.41 | 5.19 | 1.7 | 98.3 | 0.0 | 2.19 | 0.62 | 0.67 | 2.02 | 3.3 | 0.003 | 0.50 | 0.0 | 0.03 | 21.60 | 0.00 | 2.177 | 7.53 | 0.65 | 2.2 | 97.8 | 0.0 | 1.57 | 0.61 | 0.71 | 0.78 | 2.01 | 5773 | 362 | 5 | 134 | 1 | 0 | 0 | logfile |
✔ | 6R0C | 4692 | 2023-12-09 | 2019-03-12 | 4.2 | 4.33 | 4.09 | 4.2 | 0.008 | 0.86 | 0.0 | 0.05 | 27.86 | 0.01 | 1.900 | 5.06 | 0.00 | 3.1 | 96.9 | 0.0 | -2.35 | 0.88 | 0.85 | — | 4.2 | 0.004 | 0.65 | 0.0 | 0.03 | 27.62 | 0.00 | 2.094 | 10.82 | 0.32 | 4.1 | 95.9 | 0.0 | 1.67 | 0.77 | 0.88 | 0.86 | — | 11737 | 747 | 11 | 284 | 1 | 0 | 0 | logfile |
✔ | 8G3K | 29700 | 2023-12-07 | 2023-02-08 | 2.2 | 2.34 | 2.21 | 2.3 | 0.002 | 0.36 | 0.0 | 0.03 | 9.98 | 0.00 | 2.348 | 3.50 | 0.00 | 0.7 | 99.3 | 0.0 | 5.07 | 0.46 | 0.82 | 4.79 | 2.3 | 0.002 | 0.47 | 0.0 | 0.03 | 17.12 | 0.00 | 2.333 | 3.72 | 0.41 | 0.7 | 99.3 | 0.0 | 4.78 | 1.17 | 0.47 | 0.83 | 4.98 | 2244 | 285 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6S01 | 10069 | 2023-12-10 | 2019-06-13 | 3.2 | 3.27 | 3.17 | 3.2 | 0.008 | 0.72 | 0.0 | 0.04 | 26.20 | 0.01 | 2.284 | 3.83 | 1.82 | 3.9 | 96.1 | 0.0 | -5.85 | 0.74 | 0.77 | 3.18 | 3.2 | 0.003 | 0.60 | 0.0 | 0.03 | 27.65 | 0.00 | 2.136 | 9.08 | 0.14 | 3.1 | 96.9 | 0.0 | 0.90 | 0.50 | 0.82 | 0.85 | 2.68 | 12959 | 853 | 11 | 300 | 0 | 0 | 0 | logfile |
✔ | 7RZU | 24778 | 2023-12-07 | 2021-08-27 | 2.3 | 2.32 | — | 2.0 | 0.006 | 0.50 | 0.0 | 0.04 | 13.61 | 0.01 | 2.212 | 7.50 | 0.00 | 2.9 | 97.1 | 0.0 | 1.69 | 0.77 | 0.78 | 1.84 | 2.0 | 0.002 | 0.48 | 0.0 | 0.03 | 15.88 | 0.00 | 2.308 | 6.69 | 1.40 | 0.0 | 100.0 | 0.0 | 5.49 | 0.47 | 0.80 | 0.81 | 1.54 | 2439 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oX1 | 17252 | 2023-12-10 | 2023-04-28 | 2.7 | 3.00 | 2.89 | 3.0 | 0.009 | 1.05 | 1.0 | 0.06 | 26.00 | 0.01 | 2.326 | 5.33 | 0.00 | 1.8 | 98.2 | 0.0 | 0.87 | 0.82 | 0.89 | 4.59 | 3.0 | 0.005 | 0.59 | 0.0 | 0.03 | 27.16 | 0.00 | 2.314 | 6.37 | 1.05 | 2.2 | 97.8 | 0.0 | 2.12 | 0.91 | 0.83 | 0.90 | 3.51 | 13258 | 905 | 19 | 290 | 0 | 11 | 0 | logfile |
✔ | 8SC6 | 40339 | 2023-12-07 | 2023-04-04 | 3.13 | 3.36 | 3.12 | 3.4 | 0.003 | 0.50 | 0.0 | 0.03 | 8.71 | 0.00 | 2.273 | 3.28 | 0.81 | 0.9 | 99.1 | 0.0 | 2.80 | 0.58 | 0.82 | 2.08 | 3.4 | 0.002 | 0.48 | 0.0 | 0.03 | 12.61 | 0.00 | 2.228 | 4.99 | 0.00 | 1.4 | 98.6 | 0.0 | 2.53 | 0.49 | 0.55 | 0.81 | 1.82 | 3479 | 447 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8SVF | 40789 | 2023-12-10 | 2023-05-16 | 3.2 | 4.13 | 3.32 | 3.5 | 0.003 | 0.53 | 0.0 | 0.03 | 24.96 | 0.00 | 2.220 | 6.36 | 1.28 | 1.6 | 98.4 | 0.0 | 2.82 | 0.85 | 0.83 | 1.74 | 3.5 | 0.003 | 0.59 | 0.0 | 0.03 | 26.08 | 0.00 | 2.228 | 8.70 | 0.32 | 2.8 | 97.2 | 0.0 | 2.51 | 0.68 | 0.86 | 0.85 | 1.21 | 15254 | 1189 | 13 | 295 | 0 | 0 | 0 | logfile |
✔ | 8HR1 | 34956 | 2023-12-09 | 2022-12-14 | 3.02 | 2.38 | 2.94 | 3.0 | 0.010 | 0.80 | 0.0 | 0.05 | 26.09 | 0.01 | 2.255 | 8.44 | 0.16 | 3.1 | 96.9 | 0.0 | -5.09 | 0.84 | 0.81 | 2.82 | 2.9 | 0.004 | 0.61 | 0.0 | 0.03 | 28.05 | 0.00 | 2.135 | 10.82 | 0.16 | 3.2 | 96.8 | 0.0 | 1.87 | 1.26 | 0.90 | 0.89 | 1.55 | 12110 | 765 | 11 | 294 | 0 | 0 | 0 | logfile |
✔ | 8PC5 | 17594 | 2023-12-10 | 2023-06-09 | 3.02 | 3.37 | 3.06 | 3.0 | 0.006 | 0.79 | 0.0 | 0.06 | 29.26 | 0.01 | 2.205 | 7.09 | 0.42 | 1.9 | 98.1 | 0.0 | 1.05 | 0.90 | 0.86 | 3.01 | 3.0 | 0.004 | 0.57 | 0.0 | 0.03 | 27.64 | 0.00 | 2.226 | 6.66 | 0.70 | 1.9 | 98.1 | 0.0 | 1.64 | 1.94 | 0.93 | 0.91 | 2.69 | 12836 | 853 | 11 | 294 | 0 | 0 | 0 | logfile |
✔ | 8oX0 | 17251 | 2023-12-09 | 2023-04-28 | 2.52 | 2.85 | 2.85 | 2.9 | 0.007 | 0.88 | 0.0 | 0.06 | 27.18 | 0.01 | 2.156 | 2.71 | 0.00 | 1.0 | 99.0 | 0.0 | 1.78 | 0.77 | 0.79 | 4.78 | 2.9 | 0.004 | 0.57 | 0.0 | 0.03 | 28.10 | 0.00 | 2.124 | 5.20 | 1.07 | 1.8 | 98.2 | 0.0 | 2.86 | 0.31 | 0.84 | 0.89 | 3.71 | 12271 | 787 | 20 | 290 | 0 | 57 | 0 | logfile |
✔ | 8HR5 | 34958 | 2023-12-08 | 2022-12-14 | 3.73 | 4.01 | 3.70 | 4.0 | 0.004 | 0.67 | 0.0 | 0.05 | 22.20 | 0.00 | 2.191 | 12.34 | 3.37 | 5.6 | 94.4 | 0.0 | 0.07 | 0.69 | 0.72 | 2.02 | 4.0 | 0.003 | 0.60 | 0.0 | 0.03 | 22.16 | 0.00 | 2.110 | 8.28 | 0.48 | 4.4 | 95.6 | 0.0 | 1.68 | 1.28 | 0.70 | 0.73 | 1.19 | 7595 | 711 | 5 | 123 | 0 | 0 | 0 | logfile |
✔ | 8B0A | 15777 | 2023-12-10 | 2022-09-07 | 3.0 | 4.03 | 3.06 | 3.3 | 0.008 | 0.96 | 0.0 | 0.07 | 23.86 | 0.01 | 2.331 | 0.99 | 0.58 | 2.7 | 96.9 | 0.4 | -0.03 | 0.91 | 0.88 | 3.22 | 3.2 | 0.003 | 0.67 | 0.0 | 0.03 | 25.55 | 0.00 | 2.112 | 9.19 | 1.45 | 2.2 | 97.6 | 0.2 | 2.28 | 2.04 | 0.92 | 0.90 | 1.59 | 15843 | 1222 | 11 | 298 | 0 | 0 | 0 | logfile |
✔ | 8THU | 41272 | 2023-12-09 | 2023-07-18 | 3.1 | 3.86 | 3.08 | 3.2 | 0.004 | 0.68 | 0.0 | 0.04 | 28.56 | 0.01 | 1.528 | 5.35 | 0.00 | 2.2 | 97.8 | 0.0 | 1.40 | 0.93 | 0.89 | 2.77 | 3.2 | 0.004 | 0.57 | 0.0 | 0.03 | 28.42 | 0.00 | 2.194 | 8.77 | 0.16 | 2.4 | 97.6 | 0.0 | 2.69 | 0.29 | 0.94 | 0.90 | 2.11 | 11902 | 760 | 10 | 291 | 0 | 0 | 0 | logfile |
✔ | 8EYQ | 28692 | 2023-12-09 | 2022-10-28 | 3.3 | 3.53 | 3.35 | 3.3 | 0.005 | 0.82 | 0.0 | 0.05 | 22.23 | 0.01 | 1.460 | 13.80 | 1.29 | 6.9 | 92.5 | 0.6 | -2.06 | 0.87 | 0.78 | 1.33 | 3.3 | 0.004 | 0.62 | 0.0 | 0.03 | 22.00 | 0.00 | 2.081 | 10.08 | 0.43 | 4.6 | 95.3 | 0.1 | -0.48 | 1.59 | 0.91 | 0.88 | 1.92 | 48190 | 1965 | 18 | 1525 | 0 | 0 | 0 | logfile |