The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7STM | 25433 | 2023-02-25 | 2021-11-14 | 3.02 | 3.45 | — | 3.3 | 0.008 | 0.93 | 0.0 | 0.05 | 10.40 | 0.00 | 2.229 | 1.33 | 0.31 | 2.4 | 97.6 | 0.0 | 2.06 | 0.68 | 0.82 | 3.32 | 3.2 | 0.002 | 0.43 | 0.0 | 0.04 | 12.45 | 0.00 | 2.023 | 2.11 | 0.00 | 3.5 | 96.2 | 0.3 | 2.38 | 3.61 | 0.66 | 0.85 | 2.89 | 25040 | 1602 | 4 | 0 | 12 | 0 | 12100 | logfile |
✔ | 7R4T | 14316 | 2023-02-18 | 2022-02-09 | 2.75 | 2.72 | 2.62 | 2.8 | 0.011 | 1.77 | 0.0 | 0.09 | 11.86 | 0.01 | 2.520 | 0.00 | 0.00 | 3.8 | 96.2 | 0.0 | -2.02 | 0.42 | 0.84 | 4.94 | 2.8 | 0.004 | 0.55 | 0.0 | 0.05 | 15.87 | 0.00 | 2.374 | 2.12 | 0.76 | 2.7 | 97.3 | 0.0 | -1.45 | 2.29 | 0.42 | 0.89 | 6.04 | 7074 | 456 | 6 | 0 | 0 | 0 | 3606 | logfile |
✔ | 6L3T | 0825 | 2023-02-23 | 2019-10-15 | 2.34 | 2.41 | 2.27 | 2.4 | 0.010 | 1.07 | 0.0 | 0.05 | 15.75 | 0.01 | 2.306 | 1.05 | 3.61 | 1.0 | 99.0 | 0.0 | -3.24 | 0.68 | 0.86 | 4.85 | 2.4 | 0.002 | 0.55 | 0.0 | 0.03 | 16.32 | 0.00 | 1.992 | 2.15 | 1.20 | 1.1 | 98.9 | 0.0 | 3.02 | 1.61 | 0.67 | 0.87 | 4.18 | 19722 | 1206 | 18 | 0 | 6 | 204 | 9588 | logfile |
✔ | 7PY2 | 13708 | 2023-02-16 | 2021-10-08 | 2.59 | 2.64 | 1.54 | 2.7 | 0.015 | 1.83 | 0.0 | 0.08 | 17.26 | 0.01 | 2.423 | 1.71 | 2.00 | 9.1 | 90.9 | 0.0 | -5.22 | 0.45 | 0.84 | 6.05 | 2.8 | 0.006 | 0.92 | 0.0 | 0.05 | 18.12 | 0.00 | 2.134 | 2.20 | 2.50 | 5.2 | 94.8 | 0.0 | -3.96 | 1.38 | 0.49 | 0.88 | 5.69 | 2152 | 316 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VQQ | 32092 | 2023-02-16 | 2021-10-20 | 2.9 | 2.61 | — | 3.1 | 0.009 | 0.85 | 0.0 | 0.05 | 11.51 | 0.01 | 2.233 | 2.50 | 0.00 | 12.4 | 87.6 | 0.0 | -6.09 | 0.47 | 0.86 | 4.62 | 3.1 | 0.006 | 0.80 | 0.0 | 0.04 | 12.91 | 0.00 | 2.234 | 2.21 | 0.91 | 5.6 | 94.4 | 0.0 | -4.97 | 0.28 | 0.48 | 0.87 | 4.95 | 1968 | 273 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UL2 | 26589 | 2023-02-17 | 2022-04-03 | 2.4 | 2.59 | 2.47 | 2.6 | 0.008 | 1.02 | 0.0 | 0.06 | 12.80 | 0.01 | 2.306 | 6.83 | 0.84 | 1.5 | 98.5 | 0.0 | 1.60 | 0.71 | 0.84 | 4.40 | 2.6 | 0.003 | 0.56 | 0.0 | 0.04 | 14.23 | 0.00 | 2.265 | 2.21 | 1.26 | 0.3 | 99.7 | 0.0 | 2.55 | 1.31 | 0.65 | 0.84 | 2.92 | 2624 | 347 | 3 | 0 | 2 | 13 | 0 | logfile |
✔ | 7W8S | 32358 | 2023-02-18 | 2021-12-08 | 2.85 | 3.08 | — | 3.1 | 0.003 | 0.59 | 0.0 | 0.04 | 10.99 | 0.01 | 2.102 | 0.87 | 3.48 | 3.4 | 96.6 | 0.0 | -4.03 | 0.67 | 0.82 | 4.11 | 3.1 | 0.002 | 0.55 | 0.0 | 0.04 | 15.07 | 0.00 | 2.265 | 2.22 | 2.90 | 2.3 | 97.7 | 0.0 | -0.89 | 0.46 | 0.65 | 0.82 | 3.11 | 6455 | 788 | 4 | 0 | 3 | 0 | 0 | logfile |
✔ | 7Xo1 | 33333 | 2023-02-16 | 2022-04-30 | 3.0 | 2.71 | 1.85 | 3.1 | 0.002 | 0.53 | 0.0 | 0.05 | 16.42 | 0.00 | 2.269 | 6.86 | 0.00 | 5.0 | 95.0 | 0.0 | -2.46 | 0.45 | 0.86 | 4.75 | 3.1 | 0.003 | 0.59 | 0.0 | 0.05 | 17.68 | 0.00 | 2.230 | 2.29 | 2.33 | 6.4 | 93.6 | 0.0 | -2.11 | 1.59 | 0.43 | 0.86 | 5.91 | 2550 | 372 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6L3V | 0827 | 2023-02-23 | 2019-10-15 | 2.63 | 2.90 | 2.72 | 2.9 | 0.009 | 0.92 | 0.0 | 0.04 | 17.16 | 0.01 | 2.218 | 1.00 | 5.45 | 0.5 | 99.5 | 0.0 | -5.00 | 0.57 | 0.85 | 3.54 | 2.9 | 0.003 | 0.60 | 0.0 | 0.03 | 16.70 | 0.00 | 2.186 | 2.31 | 1.41 | 0.8 | 99.2 | 0.0 | 2.15 | 3.58 | 0.59 | 0.87 | 2.86 | 19416 | 1206 | 12 | 0 | 6 | 0 | 9528 | logfile |
✔ | 6ZB5 | 11145 | 2023-02-25 | 2020-06-07 | 2.85 | 2.93 | 2.86 | 2.9 | 0.009 | 0.76 | 1.0 | 0.06 | 17.24 | 0.01 | 1.985 | 2.81 | 3.76 | 7.6 | 92.4 | 0.0 | -3.22 | 0.77 | 0.85 | 3.59 | 2.9 | 0.003 | 0.57 | 0.0 | 0.04 | 17.55 | 0.00 | 2.232 | 2.32 | 3.49 | 5.0 | 95.0 | 0.0 | -0.95 | 1.13 | 0.77 | 0.86 | 3.40 | 24499 | 3096 | 9 | 0 | 29 | 0 | 0 | logfile |
✔ | 6UFR | 20759 | 2023-02-17 | 2019-09-24 | 2.5 | 2.80 | — | 2.8 | 0.012 | 0.96 | 0.0 | 0.07 | 13.71 | 0.01 | 2.209 | 5.48 | 0.00 | 6.6 | 93.4 | 0.0 | -1.99 | 0.50 | 0.87 | 5.55 | 2.8 | 0.005 | 0.68 | 0.0 | 0.06 | 17.05 | 0.00 | 2.401 | 2.35 | 3.41 | 4.9 | 95.1 | 0.0 | -0.88 | 0.97 | 0.52 | 0.89 | 5.22 | 4420 | 630 | 20 | 0 | 0 | 90 | 0 | logfile |
✔ | 7T2E | 25611 | 2023-02-16 | 2021-12-03 | 2.7 | 3.14 | — | 3.0 | 0.003 | 0.54 | 0.0 | 0.04 | 16.11 | 0.00 | 2.242 | 1.92 | 1.18 | 0.3 | 99.7 | 0.0 | 0.14 | 0.34 | 0.84 | 5.04 | 3.0 | 0.002 | 0.49 | 0.0 | 0.04 | 16.21 | 0.00 | 2.222 | 2.35 | 1.18 | 0.3 | 99.7 | 0.0 | 0.45 | 0.13 | 0.36 | 0.86 | 4.79 | 2390 | 312 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QER | 13938 | 2023-02-23 | 2021-12-03 | 2.2 | 2.66 | 2.18 | 2.3 | 0.011 | 0.71 | 0.0 | 0.05 | 14.00 | 0.00 | 2.117 | 3.04 | 2.94 | 1.6 | 98.4 | 0.0 | -0.05 | 0.84 | 0.88 | 3.46 | 2.3 | 0.002 | 0.56 | 0.0 | 0.04 | 14.85 | 0.00 | 2.246 | 2.38 | 1.90 | 1.2 | 98.8 | 0.0 | 3.52 | 1.24 | 0.84 | 0.89 | 3.41 | 19097 | 2244 | 36 | 0 | 60 | 305 | 0 | logfile |
✔ | 7T10 | 25586 | 2023-02-18 | 2021-11-30 | 2.5 | 2.70 | — | 2.8 | 0.005 | 1.00 | 0.0 | 0.06 | 12.36 | 0.01 | 2.235 | 3.61 | 0.73 | 3.0 | 97.0 | 0.0 | 0.62 | 0.64 | 0.83 | 4.77 | 2.8 | 0.002 | 0.57 | 0.0 | 0.04 | 13.76 | 0.00 | 2.268 | 2.39 | 0.73 | 2.3 | 97.7 | 0.0 | 1.52 | 0.91 | 0.64 | 0.83 | 3.88 | 8429 | 1146 | 9 | 0 | 0 | 5 | 0 | logfile |
✔ | 7Xo3 | 33335 | 2023-02-16 | 2022-04-30 | 2.6 | 2.32 | 1.68 | 2.7 | 0.002 | 0.41 | 0.0 | 0.05 | 12.37 | 0.00 | 2.223 | 4.70 | 0.00 | 8.2 | 91.8 | 0.0 | -3.31 | 0.45 | 0.81 | 5.78 | 2.7 | 0.003 | 0.56 | 0.0 | 0.05 | 16.32 | 0.00 | 2.293 | 2.44 | 3.03 | 9.8 | 90.2 | 0.0 | -1.76 | 2.17 | 0.48 | 0.85 | 5.80 | 2598 | 378 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6iG9 | 9664 | 2023-02-22 | 2018-09-25 | 4.6 | 5.44 | 4.27 | 4.3 | 0.007 | 1.07 | 0.0 | 0.05 | 9.51 | 0.01 | 2.299 | 9.69 | 0.73 | 10.2 | 89.7 | 0.2 | -3.99 | 0.69 | 0.65 | — | 4.2 | 0.003 | 0.66 | 0.0 | 0.04 | 5.17 | 0.00 | 2.218 | 2.46 | 0.00 | 9.7 | 90.3 | 0.0 | 0.91 | 1.56 | 0.87 | 0.72 | — | 17122 | 3386 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TQF | 10550 | 2023-02-19 | 2019-12-16 | 3.5 | 3.81 | — | 3.7 | 0.009 | 0.96 | 0.0 | 0.06 | 15.62 | 0.01 | 2.092 | 3.00 | 0.09 | 5.2 | 94.8 | 0.0 | -6.53 | 0.74 | 0.90 | 2.73 | 3.7 | 0.003 | 0.61 | 0.0 | 0.04 | 15.74 | 0.00 | 1.942 | 2.48 | 0.00 | 3.8 | 96.2 | 0.0 | -3.63 | 0.36 | 0.74 | 0.90 | 2.75 | 10426 | 1268 | 4 | 0 | 14 | 0 | 0 | logfile |
✔ | 7R5H | 14320 | 2023-02-18 | 2022-02-10 | 2.59 | 2.63 | 2.45 | 2.7 | 0.011 | 1.85 | 4.0 | 0.11 | 11.92 | 0.01 | 2.519 | 0.67 | 0.00 | 3.2 | 96.8 | 0.0 | -1.94 | 0.42 | 0.84 | 6.46 | 2.6 | 0.005 | 0.62 | 0.0 | 0.05 | 15.82 | 0.00 | 2.515 | 2.56 | 2.40 | 4.7 | 95.3 | 0.0 | -2.23 | 1.15 | 0.42 | 0.89 | 5.42 | 7440 | 477 | 6 | 0 | 0 | 0 | 3786 | logfile |
✔ | 7XKH | 33251 | 2023-02-25 | 2022-04-19 | 3.1 | 3.59 | 2.97 | 3.3 | 0.002 | 0.44 | 0.0 | 0.04 | 12.68 | 0.00 | 2.283 | 2.61 | 0.00 | 1.6 | 98.4 | 0.0 | 1.48 | 0.85 | 0.87 | 2.71 | 3.3 | 0.003 | 0.51 | 0.0 | 0.04 | 14.24 | 0.00 | 2.214 | 2.58 | 0.00 | 2.4 | 97.6 | 0.0 | 0.83 | 1.12 | 0.87 | 0.91 | 2.74 | 25068 | 3257 | 9 | 0 | 1 | 0 | 0 | logfile |
✔ | 7MQF | 23945 | 2023-02-24 | 2021-05-05 | 2.88 | 2.74 | 2.86 | 2.8 | 0.006 | 0.72 | 0.0 | 0.06 | 11.73 | 0.00 | 2.175 | 1.01 | 0.00 | 0.5 | 99.5 | 0.0 | 1.24 | 0.72 | 0.87 | 6.16 | 2.7 | 0.003 | 0.48 | 0.0 | 0.04 | 13.43 | 0.00 | 2.255 | 2.60 | 0.00 | 1.0 | 99.0 | 0.0 | 1.00 | 0.44 | 0.78 | 0.91 | 5.71 | 12288 | 1608 | 16 | 16 | 0 | 0 | 0 | logfile |