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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7VD8 | 31910 | 2022-04-08 | 2021-09-06 | 1.96 | 1.42 | 2.01 | 1.7 | 0.002 | 0.54 | 0.0 | 0.04 | 16.17 | 0.00 | 2.013 | 2.67 | 0.03 | 2.2 | 97.8 | 0.0 | 5.39 | 0.75 | 0.80 | 7.92 | 1.7 | 0.002 | 0.55 | 0.0 | 0.04 | 16.50 | 0.00 | 2.001 | 2.31 | 0.05 | 1.5 | 98.5 | 0.0 | 5.41 | 0.23 | 0.72 | 0.78 | 8.03 | 38201 | 4128 | 72 | 0 | 329 | 2472 | 0 | logfile |
✔ | 6YNV | 10857 | 2022-04-04 | 2020-04-14 | 2.8 | 3.33 | 2.74 | 3.2 | 0.014 | 0.90 | 0.0 | 0.06 | 15.71 | 0.01 | 2.129 | 5.63 | 1.67 | 6.0 | 94.0 | 0.0 | -3.24 | 0.64 | 0.88 | 5.38 | 3.2 | 0.004 | 0.55 | 0.0 | 0.04 | 15.81 | 0.00 | 2.217 | 2.37 | 0.28 | 5.5 | 94.5 | 0.0 | 0.31 | 1.16 | 0.64 | 0.90 | 5.15 | 6724 | 417 | 1 | 0 | 1 | 0 | 3285 | logfile |
✔ | 7A6A | 11668 | 2022-04-07 | 2020-08-25 | 1.15 | 1.13 | — | 1.2 | 0.018 | 1.70 | 24.0 | 0.16 | 14.68 | 0.01 | 1.857 | 3.78 | 3.03 | 1.2 | 98.8 | 0.0 | 2.45 | 0.47 | 0.61 | 9.02 | 1.2 | 0.003 | 0.57 | 0.0 | 0.04 | 15.15 | 0.00 | 2.188 | 2.37 | 1.82 | 1.8 | 98.2 | 0.0 | 4.61 | 0.45 | 0.69 | 0.82 | 8.90 | 41613 | 4152 | 72 | 0 | 32 | 4621 | 0 | logfile |
✔ | 7MQF | 23945 | 2022-04-06 | 2021-05-05 | 2.88 | 2.74 | 2.86 | 2.8 | 0.006 | 0.72 | 0.0 | 0.06 | 11.73 | 0.00 | 2.175 | 1.01 | 0.00 | 0.5 | 99.5 | 0.0 | 1.24 | 0.72 | 0.87 | 6.16 | 2.7 | 0.003 | 0.48 | 0.0 | 0.04 | 13.44 | 0.00 | 2.256 | 2.39 | 0.00 | 1.0 | 99.0 | 0.0 | 1.02 | 0.44 | 0.80 | 0.91 | 5.71 | 12288 | 1608 | 16 | 16 | 0 | 0 | 0 | logfile |
✔ | 6U68 | 20662 | 2022-04-05 | 2019-08-29 | 4.5 | 4.54 | — | 4.5 | 0.006 | 0.90 | 0.0 | 0.06 | 4.27 | 0.00 | 2.419 | 0.52 | 0.00 | 2.6 | 97.3 | 0.1 | -3.82 | 0.71 | 0.71 | — | 4.5 | 0.002 | 0.74 | 0.0 | 0.05 | 4.16 | 0.00 | 2.318 | 2.42 | 0.00 | 3.8 | 96.2 | 0.0 | -0.64 | 1.80 | 0.77 | 0.81 | — | 10489 | 2133 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 6L3T | 0825 | 2022-04-06 | 2019-10-15 | 2.34 | 2.41 | 2.27 | 2.4 | 0.012 | 1.03 | 0.0 | 0.05 | 16.76 | 0.01 | 2.306 | 1.05 | 3.61 | 1.0 | 99.0 | 0.0 | -3.24 | 0.68 | 0.86 | 4.85 | 2.4 | 0.003 | 0.60 | 0.0 | 0.03 | 16.29 | 0.00 | 1.929 | 2.44 | 1.41 | 1.1 | 98.9 | 0.0 | 2.69 | 1.60 | 0.69 | 0.87 | 4.48 | 19722 | 1206 | 18 | 0 | 6 | 204 | 9588 | logfile |
✔ | 6UFR | 20759 | 2022-04-04 | 2019-09-24 | 2.5 | 2.80 | — | 2.8 | 0.012 | 0.96 | 0.0 | 0.07 | 13.71 | 0.01 | 2.209 | 5.48 | 0.00 | 6.6 | 93.4 | 0.0 | -1.99 | 0.50 | 0.87 | 5.55 | 2.8 | 0.004 | 0.63 | 0.0 | 0.06 | 17.00 | 0.00 | 2.402 | 2.46 | 2.95 | 4.8 | 95.2 | 0.0 | -0.87 | 0.98 | 0.53 | 0.89 | 5.06 | 4420 | 630 | 20 | 0 | 0 | 90 | 0 | logfile |
✔ | 7KoD | 22972 | 2022-04-06 | 2020-11-08 | 1.655 | 2.30 | — | 1.9 | 0.001 | 0.33 | 0.0 | 0.03 | 8.49 | 0.00 | 2.288 | 0.80 | 0.00 | 1.1 | 98.9 | 0.0 | 6.14 | 0.91 | 0.91 | 8.16 | 2.0 | 0.005 | 0.49 | 0.0 | 0.04 | 13.81 | 0.00 | 1.858 | 2.53 | 0.27 | 0.6 | 99.4 | 0.0 | 5.26 | 0.58 | 0.88 | 0.94 | 8.02 | 68186 | 4128 | 48 | 0 | 0 | 1727 | 32643 | logfile |
✔ | 7QKW | 14055 | 2022-04-04 | 2021-12-19 | 2.32 | 1.74 | 2.60 | 2.3 | 0.010 | 1.93 | 1.0 | 0.10 | 13.53 | 0.01 | 2.534 | 0.00 | 0.00 | 5.4 | 94.6 | 0.0 | -2.79 | 0.41 | 0.81 | 7.02 | 2.3 | 0.002 | 0.52 | 0.0 | 0.05 | 16.59 | 0.00 | 2.445 | 2.55 | 1.09 | 4.8 | 95.2 | 0.0 | -2.85 | 1.38 | 0.41 | 0.84 | 5.96 | 4707 | 306 | 6 | 0 | 0 | 0 | 2439 | logfile |
✔ | 6ZB5 | 11145 | 2022-04-07 | 2020-06-07 | 2.85 | 2.93 | 2.86 | 2.9 | 0.009 | 0.76 | 1.0 | 0.06 | 17.24 | 0.01 | 1.985 | 2.81 | 3.76 | 7.6 | 92.4 | 0.0 | -3.22 | 0.77 | 0.85 | 3.59 | 2.9 | 0.007 | 0.92 | 0.0 | 0.05 | 17.78 | 0.01 | 2.151 | 2.59 | 3.98 | 6.4 | 93.6 | 0.0 | -1.38 | 1.13 | 0.79 | 0.87 | 3.59 | 24499 | 3096 | 9 | 0 | 29 | 0 | 0 | logfile |
✔ | 6L3V | 0827 | 2022-04-06 | 2019-10-15 | 2.63 | 2.90 | 2.72 | 2.9 | 0.011 | 0.89 | 0.0 | 0.04 | 17.00 | 0.01 | 2.218 | 1.00 | 5.45 | 0.5 | 99.5 | 0.0 | -5.00 | 0.57 | 0.85 | 3.54 | 2.9 | 0.002 | 0.58 | 0.0 | 0.03 | 16.57 | 0.00 | 2.198 | 2.61 | 1.21 | 0.5 | 99.5 | 0.0 | 2.37 | 3.59 | 0.59 | 0.87 | 2.85 | 19416 | 1206 | 12 | 0 | 6 | 0 | 9528 | logfile |
✔ | 6ZGi | 11207 | 2022-04-07 | 2020-06-18 | 2.9 | 3.12 | 3.02 | 3.1 | 0.006 | 0.76 | 0.0 | 0.05 | 12.43 | 0.00 | 2.317 | 1.64 | 0.73 | 4.2 | 95.7 | 0.1 | -0.93 | 0.75 | 0.83 | 4.10 | 3.1 | 0.003 | 0.57 | 0.0 | 0.04 | 14.51 | 0.00 | 2.122 | 2.62 | 1.32 | 3.9 | 96.0 | 0.0 | -0.41 | 1.19 | 0.75 | 0.85 | 3.84 | 26901 | 3294 | 33 | 0 | 78 | 0 | 0 | logfile |
✔ | 7K3W | 22658 | 2022-04-09 | 2020-09-14 | 1.36 | 1.48 | — | 1.5 | 0.005 | 0.76 | 0.0 | 0.04 | 14.50 | 0.00 | 1.934 | 3.30 | 0.00 | 1.8 | 98.2 | 0.0 | 3.35 | 0.73 | 0.80 | 9.05 | 1.5 | 0.003 | 0.65 | 0.0 | 0.04 | 14.77 | 0.00 | 2.038 | 2.63 | 0.00 | 1.8 | 98.2 | 0.0 | 4.21 | 0.17 | 0.75 | 0.82 | 9.20 | 39086 | 4128 | 72 | 0 | 382 | 2680 | 0 | logfile |
✔ | 7T10 | 25586 | 2022-04-04 | 2021-11-30 | 2.5 | 2.70 | — | 2.8 | 0.005 | 1.00 | 0.0 | 0.06 | 12.36 | 0.01 | 2.235 | 3.61 | 0.73 | 3.0 | 97.0 | 0.0 | 0.62 | 0.64 | 0.83 | 4.77 | 2.8 | 0.002 | 0.57 | 0.0 | 0.04 | 13.98 | 0.00 | 2.271 | 2.69 | 1.10 | 2.8 | 97.2 | 0.0 | 1.55 | 0.91 | 0.65 | 0.84 | 3.75 | 8429 | 1146 | 9 | 0 | 0 | 5 | 0 | logfile |
✔ | 6WWZ | 21950 | 2022-04-04 | 2020-05-09 | 3.34 | 3.53 | — | 3.5 | 0.014 | 1.77 | 0.0 | 0.09 | 13.13 | 0.00 | 2.318 | 2.07 | 0.10 | 4.4 | 95.6 | 0.0 | -3.33 | 0.56 | 0.77 | 2.93 | 3.5 | 0.004 | 0.66 | 0.0 | 0.04 | 15.30 | 0.00 | 2.193 | 2.70 | 0.10 | 3.2 | 96.8 | 0.0 | 0.27 | 1.07 | 0.72 | 0.86 | 2.63 | 9450 | 1211 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TQF | 10550 | 2022-04-05 | 2019-12-16 | 3.5 | 3.81 | — | 3.7 | 0.009 | 0.96 | 0.0 | 0.06 | 15.62 | 0.01 | 2.092 | 3.00 | 0.09 | 5.2 | 94.8 | 0.0 | -6.53 | 0.74 | 0.90 | 2.73 | 3.7 | 0.003 | 0.62 | 0.0 | 0.04 | 15.73 | 0.00 | 1.970 | 2.72 | 0.09 | 3.6 | 96.4 | 0.0 | -3.61 | 0.35 | 0.74 | 0.90 | 2.62 | 10426 | 1268 | 4 | 0 | 14 | 0 | 0 | logfile |
✔ | 7RSQ | 24677 | 2022-04-04 | 2021-08-11 | 3.8 | 4.03 | 3.73 | 4.1 | 0.008 | 0.80 | 0.0 | 0.05 | 12.74 | 0.00 | 2.360 | 4.01 | 2.88 | 3.0 | 97.0 | 0.0 | -0.64 | 0.63 | 0.68 | 1.39 | 4.2 | 0.002 | 0.51 | 0.0 | 0.03 | 15.35 | 0.00 | 2.389 | 2.76 | 0.00 | 2.6 | 97.4 | 0.0 | 2.59 | 1.83 | 0.63 | 0.70 | 1.77 | 3970 | 246 | 1 | 0 | 0 | 0 | 1958 | logfile |
✔ | 7TM0 | 25992 | 2022-04-07 | 2022-01-19 | 3.1 | 3.24 | 3.21 | 3.2 | 0.009 | 1.35 | 0.0 | 0.08 | 8.72 | 0.01 | 2.264 | 1.47 | 0.17 | 2.4 | 97.6 | 0.0 | 0.62 | 0.73 | 0.76 | 3.91 | 3.2 | 0.004 | 0.65 | 0.0 | 0.05 | 11.94 | 0.00 | 2.097 | 2.77 | 0.23 | 2.7 | 97.3 | 0.0 | 0.30 | 1.30 | 0.75 | 0.78 | 3.63 | 27963 | 4401 | 19 | 0 | 52 | 0 | 0 | logfile |
✔ | 6XEU | 22150 | 2022-04-05 | 2020-06-13 | 3.2 | 3.84 | — | 3.7 | 0.008 | 0.82 | 4.0 | 0.06 | 15.45 | 0.01 | 2.387 | 2.63 | 2.83 | 11.3 | 88.7 | 0.0 | -2.88 | 0.76 | 0.88 | 3.94 | 3.7 | 0.002 | 0.58 | 0.0 | 0.04 | 15.83 | 0.00 | 2.299 | 2.78 | 0.35 | 4.7 | 95.3 | 0.0 | 0.13 | 0.36 | 0.77 | 0.89 | 3.04 | 10544 | 1312 | 8 | 0 | 16 | 0 | 0 | logfile |
✔ | 7DZY | 30921 | 2022-04-06 | 2021-01-26 | 3.6 | 3.83 | 3.38 | 3.1 | 0.020 | 2.12 | 0.0 | 0.00 | 4.32 | 0.01 | 1.980 | 3.14 | 0.00 | 3.7 | 95.4 | 0.9 | -0.42 | 0.43 | 0.27 | — | 3.3 | 0.003 | 0.85 | 0.0 | 0.00 | 5.31 | 0.00 | 2.074 | 2.81 | 0.00 | 11.3 | 88.5 | 0.2 | -2.84 | 2.17 | 0.71 | 0.71 | — | 18708 | 4677 | 9 | 0 | 0 | 0 | 0 | logfile |