Table showing results for September 2021

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	6UET	20756	2021-09-02	2019-09-23	4.1	4.91	—	5.1	0.010	1.58	0.0	0.07	17.24	0.02	1.977	4.64	0.00	0.0	0.0	0.0	—	0.62	0.73	—	5.0	0.007	0.98	0.0	0.05	23.00	0.01	1.764	49.95	0.00	0.0	0.0	0.0	—	0.79	0.67	0.81	—	3869	0	1	119	1	0	1291	logfile
✔	6WL1	21815	2021-09-03	2020-04-17	4.0	4.02	—	4.0	0.007	0.81	0.0	0.05	7.85	0.00	2.413	3.17	0.00	0.0	100.0	0.0	-1.08	0.71	0.85	—	4.0	0.003	0.45	0.0	0.03	16.27	0.00	2.295	7.01	1.18	0.0	100.0	0.0	6.53	0.73	0.72	0.86	—	14612	1872	52	0	0	0	0	logfile
✔	6oEH	20020	2021-09-05	2019-03-27	3.8	3.93	—	3.7	0.010	1.38	0.0	0.07	11.62	0.01	2.381	2.81	0.00	0.0	0.0	0.0	—	0.38	0.77	—	3.6	0.007	1.05	0.0	0.04	5.10	0.00	2.208	12.88	0.00	0.0	0.0	0.0	—	0.56	0.41	0.81	—	32900	0	14	0	6580	0	0	logfile
✔	6LHV	0900	2021-09-03	2019-12-10	4.59	4.86	—	4.4	0.010	1.38	0.0	0.05	5.37	0.00	1.654	9.63	0.00	0.0	0.0	0.0	—	0.70	0.60	—	4.4	0.009	1.33	0.0	0.04	6.44	0.00	2.065	50.71	0.00	0.0	0.0	0.0	—	3.59	0.83	0.81	—	8456	0	3	0	1707	0	0	logfile
✔	6YoV	10864	2021-09-03	2020-04-15	3.42	4.61	—	3.9	0.011	1.14	0.0	0.07	25.21	0.01	2.395	1.39	0.00	0.0	100.0	0.0	0.87	0.88	0.82	1.84	3.9	0.004	0.72	0.0	0.04	26.47	0.01	2.095	14.32	0.43	2.2	97.8	0.0	2.36	1.29	0.89	0.86	2.05	12298	898	18	262	8	0	0	logfile
✔	6X5i	22051	2021-09-02	2020-05-26	4.3	4.27	—	4.0	0.061	3.24	210.0	0.20	32.42	0.00	2.206	29.57	0.00	0.0	0.0	0.0	—	0.70	0.70	—	4.0	0.010	1.57	210.0	0.14	27.47	0.00	1.582	67.32	0.00	0.0	0.0	0.0	—	4.38	0.66	0.73	—	4480	70	70	0	280	0	0	logfile
✔	6oDJ	20021	2021-09-04	2019-03-26	3.5	3.75	—	3.7	0.009	1.50	0.0	0.07	11.32	0.01	2.438	2.03	0.00	0.0	0.0	0.0	—	0.81	0.81	—	3.6	0.012	1.74	0.0	0.06	7.98	0.00	2.121	11.49	0.00	0.0	0.0	0.0	—	0.66	0.82	0.83	—	25415	0	17	0	5083	0	0	logfile
✔	7LQF	23484	2021-09-02	2021-02-13	3.8	3.13	—	4.0	0.007	0.93	0.0	0.05	19.18	0.00	1.403	22.67	2.08	0.0	100.0	0.0	-4.77	0.60	0.78	4.63	3.2	0.152	6.81	286.0	0.42	26.23	0.03	1.594	202.58	4.95	66.4	28.9	4.7	-9.57	2.09	0.70	0.86	2.64	5440	512	64	0	0	0	0	logfile
✔	7LYT	23601	2021-09-03	2021-03-08	2.9	2.52	2.91	3.0	0.014	0.55	0.0	0.04	18.87	0.03	2.087	6.95	0.33	0.0	100.0	0.0	-1.59	0.82	0.80	2.24	3.0	0.004	0.85	0.0	0.04	19.93	0.00	1.368	8.34	2.15	5.2	94.8	0.0	0.04	0.56	0.83	0.82	2.75	14354	712	5	92	6	0	6722	logfile
✔	6XL6	22235	2021-09-02	2020-06-28	3.0	3.41	—	3.3	0.033	0.70	0.0	0.10	20.14	0.00	2.257	5.23	0.00	0.0	100.0	0.0	-1.93	0.76	0.83	2.94	3.3	0.006	0.83	0.0	0.07	20.80	0.01	2.003	11.15	0.41	0.0	100.0	0.0	-1.41	0.27	0.75	0.84	3.03	5456	536	6	46	4	0	0	logfile
✔	6TUP	10593	2021-09-04	2020-01-08	3.2	3.52	—	3.3	0.011	1.02	0.0	0.05	21.23	0.00	0.032	54.60	0.00	0.0	100.0	0.0	-7.04	0.49	0.47	1.19	3.6	0.032	2.22	0.0	0.21	26.94	0.01	1.011	99.23	1.25	2.0	98.0	0.0	-1.97	9.62	0.56	0.59	-0.04	22400	2300	100	300	0	0	0	logfile
✔	6UES	20755	2021-09-02	2019-09-23	3.7	3.94	—	3.2	0.002	0.48	0.0	0.02	17.15	0.00	2.100	7.29	0.00	0.0	0.0	0.0	—	0.87	0.77	—	3.3	0.007	0.89	0.0	0.04	21.31	0.01	1.830	37.99	0.00	0.0	0.0	0.0	—	1.34	0.88	0.83	—	3842	0	1	119	0	0	1291	logfile
✔	6LHW	0901	2021-09-03	2019-12-10	4.84	5.29	—	4.6	0.008	1.37	1.0	0.05	5.28	0.00	1.530	14.43	0.00	0.0	0.0	0.0	—	0.64	0.56	—	4.6	0.008	1.28	0.0	0.04	6.48	0.00	2.046	43.52	0.00	0.0	0.0	0.0	—	3.27	0.81	0.80	—	7644	0	3	0	1541	0	0	logfile
✔	6o1o	0454	2021-09-03	2019-02-21	3.8	4.00	—	3.6	0.008	1.55	0.0	0.07	15.00	0.01	2.295	4.58	0.00	0.0	0.0	0.0	—	0.72	0.70	—	3.6	0.013	1.80	0.0	0.07	13.90	0.00	1.995	32.55	0.00	0.0	0.0	0.0	—	1.72	0.78	0.76	—	15193	0	14	66	2757	0	0	logfile
✔	6WL0	21814	2021-09-03	2020-04-17	4.4	4.62	—	4.4	0.006	0.82	0.0	0.04	18.91	0.00	2.353	8.18	0.00	0.0	100.0	0.0	-5.48	0.79	0.88	—	4.4	0.004	0.96	0.0	0.04	15.02	0.00	2.153	21.40	0.00	0.9	99.1	0.0	0.24	1.68	0.79	0.86	—	11480	1476	41	0	0	0	0	logfile
✔	6WR2	21875	2021-09-06	2020-04-29	2.88	3.14	—	3.1	0.014	0.88	0.0	0.06	12.47	0.01	2.203	4.10	0.00	0.1	99.9	0.0	-0.06	0.51	0.71	2.95	3.1	0.004	0.55	0.0	0.04	17.16	0.00	1.994	6.07	1.39	2.3	97.7	0.0	1.21	1.33	0.72	0.89	4.04	42671	2729	34	0	0	14	21361	logfile
✔	6ZLG	11265	2021-09-05	2020-06-30	3.0	3.18	—	3.1	0.003	0.44	0.0	0.03	16.50	0.00	2.180	7.60	4.15	0.1	99.9	0.0	1.26	0.80	0.87	2.98	3.1	0.002	0.37	0.0	0.03	17.92	0.00	2.140	5.93	2.64	1.5	98.5	0.0	5.31	1.61	0.82	0.89	2.59	33008	4072	24	0	0	0	0	logfile
✔	6PoS	20418	2021-09-02	2019-07-05	4.12	4.39	—	4.2	0.003	0.68	0.0	0.04	11.58	0.01	2.116	2.43	0.00	0.1	99.9	0.0	-2.43	0.80	0.77	—	4.2	0.004	0.58	0.0	0.04	13.09	0.00	1.834	10.96	0.00	4.8	95.2	0.0	-0.06	1.07	0.82	0.80	—	53503	3425	20	0	13	0	26853	logfile
✔	7M5o	23678	2021-09-03	2021-03-24	3.54	2.81	3.58	3.6	0.003	0.54	0.0	0.04	15.95	0.00	1.978	10.22	1.25	0.2	99.8	0.0	-2.03	0.79	0.75	1.08	3.6	0.003	0.63	0.0	0.04	17.49	0.01	2.068	11.25	0.89	5.1	94.9	0.0	0.34	1.28	0.80	0.76	1.43	11648	655	3	37	1	0	5635	logfile
✔	6ZVJ	11458	2021-09-03	2020-07-24	3.8	3.00	—	3.1	0.010	1.34	7.0	0.07	17.39	0.01	1.731	5.46	1.39	0.2	99.8	0.0	-4.19	0.59	0.64	1.31	3.0	0.007	0.78	0.0	0.04	17.74	0.01	1.745	16.48	0.19	6.3	93.7	0.0	-1.49	1.69	0.67	0.75	1.11	115020	10127	55	1720	9	0	0	logfile

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