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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7XD7 | 33138 | 2024-03-11 | 2022-03-26 | 3.02 | 3.40 | — | 3.1 | 0.003 | 0.61 | 0.0 | 0.04 | 23.14 | 0.00 | 1.736 | 0.77 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.86 | — | 3.1 | 0.007 | 0.67 | 0.0 | 0.04 | 23.18 | 0.00 | 1.877 | 7.58 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.21 | 0.92 | 0.92 | — | 8693 | 0 | 1 | 405 | 30 | 0 | 0 | logfile |
✔ | 7XD3 | 33134 | 2024-03-14 | 2022-03-26 | 4.05 | 4.16 | — | 3.8 | 0.003 | 0.62 | 0.0 | 0.04 | 24.05 | 0.00 | 1.960 | 1.21 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.85 | 0.74 | — | 3.9 | 0.007 | 0.81 | 0.0 | 0.04 | 24.31 | 0.01 | 1.687 | 16.91 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.74 | 0.87 | 0.81 | — | 9062 | 0 | 1 | 423 | 28 | 0 | 0 | logfile |
✔ | 7URM | 26714 | 2024-03-10 | 2022-04-22 | 3.0 | 3.11 | 3.56 | 2.9 | 0.009 | 1.41 | 0.0 | 0.11 | 28.63 | 0.01 | 2.440 | 0.70 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.14 | 0.53 | — | 3.0 | 0.007 | 1.15 | 0.0 | 0.05 | 27.88 | 0.01 | 2.001 | 29.60 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.67 | 0.15 | 0.53 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |
✔ | 6o1o | 0454 | 2024-03-16 | 2019-02-21 | 3.8 | 4.00 | — | 3.6 | 0.008 | 1.55 | 0.0 | 0.07 | 18.29 | 0.01 | 2.295 | 4.58 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.72 | 0.70 | — | 3.6 | 0.012 | 1.72 | 0.0 | 0.07 | 17.09 | 0.00 | 1.997 | 30.54 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.70 | 0.78 | 0.76 | — | 15193 | 0 | 14 | 66 | 2757 | 0 | 0 | logfile |
✔ | 6oEF | 20020 | 2024-03-25 | 2019-03-27 | 3.8 | 3.98 | — | 3.8 | 0.007 | 1.67 | 0.0 | 0.07 | 11.76 | 0.01 | 2.376 | 3.96 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.47 | 0.78 | — | 3.8 | 0.006 | 1.21 | 0.0 | 0.05 | 6.00 | 0.00 | 2.197 | 8.15 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.58 | 0.49 | 0.80 | — | 51240 | 0 | 14 | 0 | 10248 | 0 | 0 | logfile |
✔ | 7URi | 26713 | 2024-03-10 | 2022-04-22 | 2.6 | 2.67 | 2.95 | 2.6 | 0.009 | 1.37 | 0.0 | 0.12 | 30.06 | 0.01 | 2.201 | 7.31 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.05 | 0.34 | — | 2.6 | 0.007 | 1.42 | 0.0 | 0.07 | 28.72 | 0.01 | 2.070 | 25.42 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.08 | 0.08 | 0.38 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |
✔ | 7YC8 | 33736 | 2024-03-11 | 2022-07-01 | 4.14 | 7.25 | 4.31 | 4.1 | 0.002 | 0.51 | 0.0 | 0.02 | 25.12 | 0.00 | 2.079 | 18.05 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.96 | 0.87 | — | 4.1 | 0.006 | 0.81 | 0.0 | 0.04 | 27.57 | 0.01 | 1.977 | 68.78 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.24 | 0.97 | 0.89 | — | 8335 | 0 | 1 | 388 | 1 | 0 | 0 | logfile |
✔ | 4UQ8 | 2676 | 2024-03-20 | 2014-06-21 | 4.95 | 5.05 | 4.64 | 4.9 | 0.012 | 2.07 | 23.0 | 1.38 | 6.71 | 0.01 | 1.032 | 64.12 | 25.00 | 0.0 | 0.0 | 0.0 | — | 0.57 | 0.75 | — | 4.9 | 0.013 | 2.54 | 0.0 | 0.41 | 5.47 | 0.00 | 2.131 | 22.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.11 | 0.61 | 0.83 | — | 28647 | 33 | 54 | 0 | 5686 | 0 | 0 | logfile |
✔ | 7YGB | 33814 | 2024-03-11 | 2022-07-11 | 2.62 | 3.15 | 2.70 | 2.9 | 0.007 | 0.52 | 0.0 | 0.03 | 24.24 | 0.00 | 2.079 | 13.50 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.88 | 0.84 | — | 2.9 | 0.007 | 0.64 | 0.0 | 0.04 | 23.99 | 0.00 | 1.834 | 13.50 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.87 | 0.92 | 0.92 | — | 8738 | 0 | 5 | 407 | 54 | 0 | 0 | logfile |
✔ | 7YG8 | 33811 | 2024-03-11 | 2022-07-11 | 2.97 | 3.59 | 3.04 | 3.0 | 0.002 | 0.48 | 0.0 | 0.03 | 24.52 | 0.00 | 2.042 | 13.48 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.89 | 0.82 | — | 3.0 | 0.006 | 0.65 | 0.0 | 0.04 | 24.62 | 0.00 | 1.829 | 19.71 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.38 | 0.91 | 0.89 | — | 8440 | 0 | 3 | 395 | 5 | 0 | 0 | logfile |
✔ | 7TD6 | 25824 | 2024-03-10 | 2021-12-30 | 3.0 | 3.41 | 3.09 | 3.4 | 0.002 | 0.57 | 0.0 | 0.05 | 16.47 | 0.00 | 2.449 | 7.94 | 0.00 | 0.0 | 100.0 | 0.0 | -3.11 | 0.42 | 0.76 | 2.95 | 3.4 | 0.006 | 0.84 | 0.0 | 0.05 | 18.31 | 0.00 | 2.252 | 12.18 | 4.03 | 8.5 | 91.5 | 0.0 | -4.02 | 2.29 | 0.43 | 0.77 | 4.22 | 5575 | 690 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oDJ | 20021 | 2024-03-19 | 2019-03-26 | 3.5 | 3.75 | — | 3.7 | 0.009 | 1.50 | 0.0 | 0.07 | 11.32 | 0.01 | 2.438 | 2.03 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.81 | 0.81 | — | 3.7 | 0.012 | 1.73 | 0.0 | 0.06 | 7.96 | 0.00 | 2.090 | 10.56 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.60 | 0.82 | 0.83 | — | 25415 | 0 | 17 | 0 | 5083 | 0 | 0 | logfile |
✔ | 7YGA | 33813 | 2024-03-11 | 2022-07-11 | 2.35 | 3.08 | 2.44 | 2.8 | 0.008 | 0.62 | 0.0 | 0.04 | 24.74 | 0.01 | 1.779 | 10.87 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.89 | 0.87 | — | 2.8 | 0.007 | 0.61 | 0.0 | 0.04 | 24.28 | 0.00 | 1.825 | 12.17 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.84 | 0.89 | 0.88 | — | 8692 | 0 | 3 | 407 | 8 | 0 | 0 | logfile |
✔ | 7YGC | 33815 | 2024-03-11 | 2022-07-11 | 2.65 | 3.28 | 2.77 | 2.9 | 0.007 | 0.50 | 0.0 | 0.03 | 24.40 | 0.00 | 1.778 | 12.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.83 | — | 2.9 | 0.004 | 0.55 | 0.0 | 0.03 | 24.24 | 0.00 | 1.926 | 14.01 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.47 | 0.92 | 0.90 | — | 8690 | 0 | 3 | 407 | 6 | 0 | 0 | logfile |
✔ | 7EZ2 | 31386 | 2024-03-11 | 2021-06-01 | 3.05 | 2.80 | — | 3.0 | 0.005 | 0.56 | 0.0 | 0.03 | 23.37 | 0.00 | 1.809 | 0.92 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.69 | 0.81 | — | 3.0 | 0.008 | 0.87 | 0.0 | 0.05 | 23.77 | 0.01 | 1.758 | 7.51 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.04 | 0.73 | 0.89 | — | 8698 | 0 | 3 | 406 | 31 | 0 | 0 | logfile |
✔ | 7YGD | 33816 | 2024-03-11 | 2022-07-11 | 3.41 | 4.13 | 3.42 | 3.3 | 0.002 | 0.49 | 0.0 | 0.03 | 24.63 | 0.00 | 2.100 | 14.25 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.81 | — | 3.3 | 0.007 | 0.75 | 0.0 | 0.04 | 25.30 | 0.01 | 1.824 | 32.50 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.50 | 0.91 | 0.88 | — | 8313 | 0 | 3 | 389 | 6 | 0 | 0 | logfile |
✔ | 8EEP | 28054 | 2024-03-10 | 2022-09-07 | 2.2 | 2.31 | 2.33 | 2.3 | 0.004 | 1.00 | 0.0 | 0.71 | 22.11 | 0.00 | 0.286 | 7.98 | 1.59 | 0.0 | 100.0 | 0.0 | 1.98 | 0.74 | 0.81 | 4.21 | 2.3 | 0.033 | 1.72 | 0.0 | 0.12 | 19.42 | 0.01 | 1.841 | 9.30 | 1.61 | 0.4 | 99.6 | 0.0 | 1.86 | 1.38 | 0.74 | 0.81 | 3.63 | 108060 | 13260 | 60 | 0 | 120 | 0 | 0 | logfile |
✔ | 8FF3 | 29037 | 2024-03-10 | 2022-12-07 | 3.09 | 2.31 | 2.69 | 3.2 | 0.002 | 0.43 | 0.0 | 0.06 | 8.70 | 0.00 | 2.616 | 1.83 | 0.00 | 0.0 | 100.0 | 0.0 | -2.15 | 0.40 | 0.67 | 4.94 | 3.2 | 0.004 | 0.49 | 0.0 | 0.05 | 11.72 | 0.00 | 2.004 | 5.95 | 0.93 | 1.4 | 98.6 | 0.0 | -2.33 | 0.51 | 0.36 | 0.72 | 4.63 | 2190 | 150 | 6 | 0 | 0 | 0 | 1122 | logfile |
✔ | 7UUQ | 26800 | 2024-03-10 | 2022-04-28 | 3.1 | 3.45 | 2.98 | 3.3 | 0.018 | 1.82 | 0.0 | 0.06 | 18.29 | 0.01 | 1.865 | 20.35 | 0.00 | 0.0 | 100.0 | 0.0 | -9.31 | 0.68 | 0.85 | 2.95 | 3.3 | 0.118 | 4.54 | 13.0 | 0.23 | 31.76 | 0.03 | 1.584 | 57.12 | 19.78 | 66.7 | 30.4 | 3.0 | -10.84 | 0.67 | 0.73 | 0.90 | 3.59 | 4760 | 364 | 98 | 0 | 98 | 0 | 0 | logfile |
✔ | 8B3P | 15832 | 2024-03-17 | 2022-09-16 | 2.81 | 3.73 | 2.92 | 3.3 | 0.008 | 1.53 | 30.0 | 0.10 | 16.99 | 0.00 | 2.469 | 4.32 | 0.78 | 0.0 | 100.0 | 0.0 | -0.91 | 0.82 | 0.93 | 1.32 | 3.3 | 0.003 | 0.54 | 0.0 | 0.03 | 18.16 | 0.00 | 2.220 | 4.46 | 2.07 | 0.0 | 100.0 | 0.0 | 5.67 | 1.29 | 0.80 | 0.90 | 0.22 | 17620 | 2370 | 55 | 0 | 0 | 0 | 0 | logfile |