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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7P6A | 13223 | 2022-12-11 | 2021-07-15 | 1.9 | 1.91 | 1.88 | 1.9 | 0.004 | 0.72 | 0.0 | 0.06 | 12.30 | 0.01 | 2.247 | 3.33 | 0.00 | 3.8 | 96.2 | 0.0 | -3.07 | 0.51 | 0.86 | 7.13 | 1.9 | 0.003 | 0.65 | 0.0 | 0.05 | 14.09 | 0.00 | 2.291 | 4.28 | 0.00 | 4.7 | 95.3 | 0.0 | -2.61 | 0.82 | 0.55 | 0.89 | 7.80 | 4166 | 540 | 10 | 0 | 0 | 76 | 0 | logfile |
✘ | 7UT6 | 26756 | 2022-12-18 | 2022-04-26 | 1.91 | 2.02 | 1.94 | 2.0 | 0.042 | 0.66 | 0.0 | 0.05 | 16.31 | 0.01 | 1.975 | 5.33 | 0.93 | 2.4 | 97.6 | 0.0 | 0.26 | 0.75 | 0.87 | 6.53 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16442 | 1998 | 12 | 0 | 8 | 415 | 0 | logfile |
✘ | 7UT7 | 26757 | 2022-12-18 | 2022-04-26 | 1.91 | 1.94 | 1.87 | 2.0 | 0.042 | 0.66 | 0.0 | 0.05 | 16.33 | 0.01 | 1.975 | 5.18 | 0.87 | 2.4 | 97.6 | 0.0 | 0.26 | 0.72 | 0.85 | 7.26 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16442 | 1998 | 12 | 0 | 8 | 415 | 0 | logfile |
✔ | 7QK5 | 14038 | 2022-12-12 | 2021-12-17 | 1.92 | 1.67 | 1.83 | 2.2 | 0.011 | 1.89 | 4.0 | 0.10 | 10.96 | 0.01 | 2.401 | 0.67 | 0.00 | 4.5 | 95.5 | 0.0 | -1.58 | 0.32 | 0.78 | 6.85 | 2.2 | 0.004 | 0.64 | 0.0 | 0.05 | 18.34 | 0.01 | 2.238 | 4.68 | 2.74 | 3.7 | 96.3 | 0.0 | -1.87 | 1.49 | 0.36 | 0.82 | 7.41 | 10485 | 666 | 18 | 0 | 36 | 0 | 5337 | logfile |
✔ | 7Z15 | 14441 | 2022-12-21 | 2022-02-24 | 1.93 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |
✔ | 7N8o | 24239 | 2022-12-11 | 2021-06-15 | 1.93 | 1.73 | — | 1.9 | 0.024 | 2.36 | 0.0 | 0.13 | 20.20 | 0.01 | 1.522 | 14.96 | 1.91 | 3.0 | 96.9 | 0.1 | 0.75 | 0.73 | 0.75 | 5.48 | 1.8 | 0.004 | 0.76 | 0.0 | 0.05 | 18.62 | 0.01 | 2.011 | 12.03 | 1.57 | 2.8 | 97.2 | 0.0 | 1.10 | 0.35 | 0.75 | 0.77 | 5.40 | 54656 | 5544 | 113 | 0 | 228 | 1236 | 0 | logfile |
✔ | 7JJP | 22358 | 2022-12-21 | 2020-07-27 | 1.94 | 2.15 | 2.08 | 2.1 | 0.011 | 0.87 | 0.0 | 0.07 | 13.34 | 0.01 | 2.228 | 2.51 | 0.56 | 1.6 | 98.4 | 0.0 | 0.39 | 0.71 | 0.85 | 5.30 | 2.1 | 0.003 | 0.54 | 0.0 | 0.04 | 14.41 | 0.00 | 2.090 | 6.65 | 0.65 | 1.7 | 98.3 | 0.0 | 3.45 | 0.92 | 0.71 | 0.87 | 4.95 | 40920 | 2352 | 36 | 0 | 180 | 396 | 19104 | logfile |
✔ | 7MBX | 23749 | 2022-12-12 | 2021-04-01 | 1.95 | 2.56 | 1.94 | 2.4 | 0.005 | 0.88 | 1.0 | 0.06 | 11.68 | 0.01 | 2.287 | 2.46 | 0.45 | 1.5 | 98.5 | 0.0 | -0.11 | 0.72 | 0.86 | 4.55 | 2.3 | 0.004 | 0.60 | 0.0 | 0.04 | 15.19 | 0.00 | 2.150 | 6.67 | 1.00 | 1.1 | 98.9 | 0.0 | 1.58 | 0.52 | 0.71 | 0.88 | 4.58 | 8433 | 1065 | 11 | 0 | 2 | 61 | 0 | logfile |
✘ | 7D1T | 30547 | 2022-12-19 | 2020-09-15 | 1.95 | 1.88 | 1.89 | 1.9 | 0.020 | 1.91 | 31.0 | 0.10 | 18.53 | 0.02 | 1.200 | 3.45 | 2.40 | 1.9 | 97.9 | 0.2 | -0.93 | 0.77 | 0.85 | 6.98 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 52994 | 5312 | 108 | 0 | 196 | 2432 | 0 | logfile |
✘ | 6YBQ | 10771 | 2022-12-18 | 2020-03-17 | 1.96 | 2.06 | — | 2.0 | 0.005 | 0.73 | 0.0 | 0.05 | 13.34 | 0.01 | 1.192 | 2.27 | 0.00 | 2.7 | 97.3 | 0.0 | -1.94 | 0.82 | 0.87 | 6.46 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 34092 | 4289 | 36 | 0 | 12 | 871 | 0 | logfile |
✔ | 7VD8 | 31910 | 2022-12-20 | 2021-09-06 | 1.96 | 1.42 | 2.01 | 1.7 | 0.002 | 0.54 | 0.0 | 0.04 | 16.17 | 0.00 | 2.013 | 3.17 | 0.03 | 2.2 | 97.8 | 0.0 | 5.39 | 0.75 | 0.80 | 7.92 | 1.7 | 0.002 | 0.55 | 0.0 | 0.04 | 16.50 | 0.00 | 2.001 | 2.61 | 0.05 | 1.5 | 98.5 | 0.0 | 5.41 | 0.23 | 0.74 | 0.80 | 8.03 | 38201 | 4128 | 72 | 0 | 329 | 2472 | 0 | logfile |
✔ | 7TFC | 25869 | 2022-12-22 | 2022-01-06 | 1.96 | 2.13 | — | 2.1 | 0.002 | 0.53 | 0.0 | 0.04 | 17.59 | 0.00 | 1.913 | 6.27 | 1.74 | 4.1 | 95.9 | 0.0 | 0.82 | 0.43 | 0.60 | 5.65 | 2.1 | 0.002 | 0.51 | 0.0 | 0.04 | 17.24 | 0.00 | 1.871 | 18.01 | 0.75 | 4.5 | 95.5 | 0.0 | 1.07 | 1.37 | 0.74 | 0.84 | 6.12 | 50456 | 6356 | 42 | 0 | 28 | 0 | 140 | logfile |
✘ | 7FiX | 31605 | 2022-12-19 | 2021-08-01 | 1.97 | 2.54 | 1.91 | 2.2 | 0.021 | 1.45 | 0.0 | 0.05 | 17.92 | 0.02 | 1.200 | 5.87 | 0.00 | 2.1 | 97.9 | 0.0 | 1.60 | 0.80 | 0.89 | 5.54 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 73929 | 7137 | 96 | 0 | 444 | 348 | 0 | logfile |
✘ | 7Z18 | 14444 | 2022-12-20 | 2022-02-24 | 1.98 | 2.40 | 2.04 | 2.3 | 0.008 | 0.94 | 0.0 | 0.06 | 15.02 | 0.01 | 1.726 | 3.47 | 1.19 | 1.9 | 98.1 | 0.0 | 1.45 | 0.79 | 0.82 | 5.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37659 | 2432 | 18 | 0 | 10 | 2 | 18660 | logfile |
✔ | 7MiJ | 23853 | 2022-12-14 | 2021-04-17 | 1.98 | 1.95 | — | 2.0 | 0.010 | 1.38 | 4.0 | 0.05 | 19.92 | 0.01 | 2.320 | 3.08 | 0.18 | 2.8 | 97.2 | 0.0 | -3.96 | 0.75 | 0.81 | 5.48 | 2.0 | 0.004 | 0.69 | 0.0 | 0.04 | 18.91 | 0.00 | 2.094 | 5.63 | 1.27 | 3.8 | 96.2 | 0.0 | 0.72 | 0.64 | 0.77 | 0.82 | 5.32 | 23010 | 2556 | 12 | 0 | 38 | 328 | 0 | logfile |
✔ | 6WX6 | 21951 | 2022-12-13 | 2020-05-09 | 2.0 | 2.11 | 2.08 | 2.1 | 0.006 | 0.69 | 0.0 | 0.04 | 14.94 | 0.00 | 2.277 | 0.00 | 0.00 | 1.2 | 98.8 | 0.0 | 1.60 | 0.77 | 0.88 | 7.70 | 2.1 | 0.004 | 0.55 | 0.0 | 0.04 | 16.24 | 0.00 | 2.003 | 3.40 | 0.69 | 1.2 | 98.8 | 0.0 | 4.62 | 0.53 | 0.79 | 0.90 | 7.39 | 68332 | 4128 | 56 | 0 | 8 | 2420 | 32664 | logfile |
✔ | 8ECY | 28025 | 2022-12-21 | 2022-09-02 | 2.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 46485 | 5540 | 45 | 0 | 36 | 2024 | 0 | logfile |
✔ | 7oAE | 12775 | 2022-12-13 | 2021-04-19 | 2.0 | 2.65 | — | 2.2 | 0.008 | 0.53 | 0.0 | 0.05 | 9.44 | 0.00 | 2.440 | 0.99 | 0.00 | 2.6 | 97.4 | 0.0 | 0.22 | 0.77 | 0.91 | 6.46 | 2.2 | 0.002 | 0.52 | 0.0 | 0.04 | 15.06 | 0.00 | 2.223 | 5.99 | 0.38 | 1.8 | 98.2 | 0.0 | 0.44 | 2.53 | 0.78 | 0.93 | 6.31 | 12768 | 1680 | 42 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZJA | 11233 | 2022-12-15 | 2020-06-28 | 2.0 | 2.10 | 2.09 | 2.1 | 0.006 | 0.86 | 0.0 | 0.06 | 14.14 | 0.01 | 1.974 | 0.84 | 1.37 | 4.1 | 95.9 | 0.0 | -0.40 | 0.79 | 0.87 | 6.97 | 2.1 | 0.003 | 0.66 | 0.0 | 0.05 | 15.95 | 0.00 | 1.866 | 1.79 | 0.56 | 4.2 | 95.8 | 0.0 | 0.14 | 0.39 | 0.78 | 0.90 | 6.69 | 77951 | 9684 | 60 | 0 | 36 | 3191 | 0 | logfile |
✔ | 6SAG | 10130 | 2022-12-11 | 2019-07-16 | 2.0 | 2.11 | 2.01 | 2.1 | 0.004 | 0.65 | 0.0 | 0.04 | 12.99 | 0.00 | 0.351 | 2.79 | 0.00 | 2.6 | 97.4 | 0.0 | -0.33 | 0.58 | 0.86 | 6.64 | 2.1 | 0.004 | 0.65 | 0.0 | 0.04 | 15.31 | 0.01 | 2.030 | 3.13 | 1.19 | 3.0 | 97.0 | 0.0 | 1.39 | 0.73 | 0.59 | 0.89 | 6.90 | 54080 | 6120 | 240 | 120 | 240 | 2840 | 0 | logfile |