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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7N8o | 24239 | 2022-05-12 | 2021-06-15 | 1.93 | 1.73 | — | 1.9 | 0.024 | 2.36 | 0.0 | 0.13 | 20.20 | 0.01 | 1.522 | 14.85 | 1.91 | 3.0 | 96.9 | 0.1 | 0.75 | 0.73 | 0.75 | 5.48 | 1.9 | 0.005 | 0.77 | 0.0 | 0.04 | 18.49 | 0.01 | 2.020 | 11.59 | 1.40 | 2.6 | 97.4 | 0.0 | 1.31 | 0.36 | 0.75 | 0.77 | 5.38 | 54656 | 5544 | 113 | 0 | 228 | 1236 | 0 | logfile |
✔ | 7JJP | 22358 | 2022-05-17 | 2020-07-27 | 1.94 | 2.15 | 2.08 | 2.1 | 0.011 | 0.87 | 0.0 | 0.07 | 13.34 | 0.01 | 2.228 | 2.51 | 0.56 | 1.6 | 98.4 | 0.0 | 0.39 | 0.71 | 0.85 | 5.30 | 2.1 | 0.004 | 0.58 | 0.0 | 0.04 | 14.55 | 0.00 | 2.082 | 6.69 | 0.79 | 2.0 | 98.0 | 0.0 | 3.29 | 0.94 | 0.72 | 0.88 | 4.96 | 40920 | 2352 | 36 | 0 | 180 | 396 | 19104 | logfile |
✘ | 7D1T | 30547 | 2022-05-12 | 2020-09-15 | 1.95 | 1.88 | 1.89 | 1.9 | 0.020 | 1.91 | 31.0 | 0.10 | 18.53 | 0.02 | 1.200 | 3.45 | 2.40 | 1.9 | 97.9 | 0.2 | -0.93 | 0.77 | 0.85 | 6.98 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 52994 | 5312 | 108 | 0 | 196 | 2432 | 0 | logfile |
✔ | 7MBX | 23749 | 2022-05-12 | 2021-04-01 | 1.95 | 2.56 | 1.94 | 2.4 | 0.006 | 0.87 | 1.0 | 0.16 | 12.33 | 0.01 | 2.287 | 2.46 | 0.45 | 1.5 | 98.5 | 0.0 | -0.11 | 0.72 | 0.86 | 4.55 | 2.3 | 0.004 | 0.74 | 0.0 | 0.07 | 15.38 | 0.00 | 2.157 | 6.37 | 1.00 | 1.2 | 98.8 | 0.0 | 1.54 | 0.53 | 0.72 | 0.88 | 4.51 | 8433 | 1065 | 11 | 0 | 2 | 61 | 0 | logfile |
✔ | 6YBQ | 10771 | 2022-05-16 | 2020-03-17 | 1.96 | 2.06 | — | 2.0 | 0.039 | 1.58 | 0.0 | 0.05 | 15.05 | 0.01 | 1.550 | 4.72 | 0.00 | 2.7 | 97.3 | 0.0 | -1.94 | 0.82 | 0.87 | 6.46 | 2.0 | 0.003 | 0.72 | 0.0 | 0.05 | 15.91 | 0.00 | 2.108 | 4.76 | 0.41 | 2.4 | 97.6 | 0.0 | 0.00 | 0.46 | 0.84 | 0.89 | 6.08 | 34092 | 4289 | 36 | 0 | 12 | 871 | 0 | logfile |
✔ | 7VD8 | 31910 | 2022-05-17 | 2021-09-06 | 1.96 | 1.42 | 2.01 | 1.7 | 0.002 | 0.54 | 0.0 | 0.04 | 16.17 | 0.00 | 2.013 | 3.17 | 0.03 | 2.2 | 97.8 | 0.0 | 5.39 | 0.75 | 0.80 | 7.92 | 1.7 | 0.002 | 0.55 | 0.0 | 0.04 | 16.50 | 0.00 | 2.001 | 2.61 | 0.05 | 1.5 | 98.5 | 0.0 | 5.41 | 0.23 | 0.72 | 0.78 | 8.03 | 38201 | 4128 | 72 | 0 | 329 | 2472 | 0 | logfile |
✔ | 6YL3 | 10835 | 2022-05-22 | 2020-04-06 | 1.98 | 2.04 | 1.99 | 2.0 | 0.067 | 3.60 | 246.0 | 0.36 | 16.35 | 0.02 | 1.877 | 4.58 | 2.74 | 5.3 | 94.4 | 0.4 | -2.46 | 0.78 | 0.83 | 6.40 | 2.0 | 0.005 | 0.78 | 0.0 | 0.05 | 16.28 | 0.01 | 1.724 | 5.71 | 1.55 | 4.1 | 95.8 | 0.1 | -0.22 | 0.53 | 0.81 | 0.86 | 7.04 | 150156 | 9552 | 84 | 0 | 24 | 3672 | 73044 | logfile |
✔ | 7MiJ | 23853 | 2022-05-15 | 2021-04-17 | 1.98 | 1.95 | — | 2.0 | 0.010 | 1.38 | 4.0 | 0.05 | 19.92 | 0.01 | 2.320 | 3.08 | 0.18 | 2.8 | 97.2 | 0.0 | -3.96 | 0.75 | 0.81 | 5.48 | 2.0 | 0.003 | 0.58 | 0.0 | 0.04 | 18.50 | 0.00 | 2.156 | 4.67 | 1.18 | 2.8 | 97.2 | 0.0 | 1.00 | 1.08 | 0.77 | 0.82 | 4.97 | 23010 | 2556 | 12 | 0 | 38 | 328 | 0 | logfile |
✔ | 7K00 | 22586 | 2022-05-21 | 2020-09-02 | 1.98 | 1.72 | — | 1.9 | 0.007 | 0.96 | 3.0 | 0.05 | 15.24 | 0.02 | 1.588 | 7.51 | 6.32 | 3.9 | 96.0 | 0.1 | -1.76 | 0.69 | 0.83 | 5.00 | 1.8 | 0.006 | 0.84 | 0.0 | 0.04 | 15.29 | 0.01 | 1.757 | 8.10 | 3.17 | 3.9 | 96.1 | 0.0 | 0.01 | 0.86 | 0.71 | 0.86 | 4.96 | 149338 | 5585 | 117 | 4555 | 331 | 7248 | 0 | logfile |
✔ | 6SAG | 10130 | 2022-05-12 | 2019-07-16 | 2.0 | 2.11 | 2.01 | 2.1 | 0.004 | 0.65 | 0.0 | 0.04 | 12.99 | 0.00 | 0.351 | 2.79 | 0.00 | 2.6 | 97.4 | 0.0 | -0.33 | 0.58 | 0.86 | 6.64 | 2.1 | 0.004 | 0.63 | 0.0 | 0.04 | 15.40 | 0.01 | 2.054 | 3.11 | 1.17 | 3.1 | 96.9 | 0.0 | 1.56 | 0.73 | 0.60 | 0.89 | 6.90 | 54080 | 6120 | 240 | 120 | 240 | 2840 | 0 | logfile |
✔ | 6WX6 | 21951 | 2022-05-14 | 2020-05-09 | 2.0 | 2.11 | 2.08 | 2.1 | 0.006 | 0.69 | 0.0 | 0.04 | 14.94 | 0.00 | 2.277 | 0.00 | 0.00 | 1.2 | 98.8 | 0.0 | 1.60 | 0.77 | 0.88 | 7.70 | 2.1 | 0.004 | 0.55 | 0.0 | 0.04 | 16.24 | 0.00 | 2.003 | 3.40 | 0.69 | 1.2 | 98.8 | 0.0 | 4.62 | 0.53 | 0.78 | 0.90 | 7.39 | 68332 | 4128 | 56 | 0 | 8 | 2420 | 32664 | logfile |
✔ | 6ZJA | 11233 | 2022-05-15 | 2020-06-28 | 2.0 | 2.10 | 2.09 | 2.1 | 0.006 | 0.86 | 0.0 | 0.06 | 14.19 | 0.01 | 1.974 | 0.84 | 1.37 | 4.1 | 95.9 | 0.0 | -0.40 | 0.79 | 0.87 | 6.97 | 2.1 | 0.004 | 0.72 | 0.0 | 0.05 | 15.95 | 0.01 | 1.820 | 1.85 | 0.56 | 4.3 | 95.7 | 0.0 | 0.02 | 0.39 | 0.78 | 0.89 | 6.77 | 77951 | 9684 | 60 | 0 | 36 | 3191 | 0 | logfile |
✔ | 7QEY | 13944 | 2022-05-13 | 2021-12-03 | 2.0 | 2.46 | — | 2.2 | 0.009 | 0.57 | 0.0 | 0.03 | 10.74 | 0.00 | 2.199 | 3.57 | 2.35 | 1.7 | 98.3 | 0.0 | 1.74 | 0.77 | 0.90 | 5.27 | 2.1 | 0.003 | 0.67 | 0.0 | 0.04 | 13.24 | 0.00 | 2.166 | 4.70 | 1.74 | 2.2 | 97.8 | 0.0 | 3.20 | 0.55 | 0.78 | 0.92 | 4.07 | 9467 | 1092 | 18 | 0 | 30 | 281 | 0 | logfile |
✔ | 7oAE | 12775 | 2022-05-13 | 2021-04-19 | 2.0 | 2.65 | — | 2.2 | 0.008 | 0.53 | 0.0 | 0.05 | 9.44 | 0.00 | 2.440 | 0.99 | 0.00 | 2.6 | 97.4 | 0.0 | 0.22 | 0.77 | 0.91 | 6.46 | 2.2 | 0.002 | 0.52 | 0.0 | 0.04 | 15.06 | 0.00 | 2.223 | 5.99 | 0.38 | 1.8 | 98.2 | 0.0 | 0.44 | 2.53 | 0.78 | 0.92 | 6.31 | 12768 | 1680 | 42 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RCV | 24407 | 2022-05-12 | 2021-07-08 | 2.01 | 1.78 | — | 1.9 | 0.024 | 2.35 | 0.0 | 0.13 | 20.29 | 0.01 | 1.915 | 14.01 | 1.99 | 2.6 | 97.4 | 0.0 | 0.92 | 0.78 | 0.79 | 5.10 | 1.9 | 0.004 | 0.79 | 0.0 | 0.05 | 18.79 | 0.01 | 2.078 | 12.10 | 1.79 | 2.8 | 97.2 | 0.0 | 0.86 | 0.91 | 0.79 | 0.82 | 5.23 | 54656 | 5544 | 114 | 0 | 228 | 1236 | 0 | logfile |
✘ | 7F4V | 31455 | 2022-05-14 | 2021-06-21 | 2.04 | 1.80 | — | 2.0 | 0.025 | 2.41 | 0.0 | 0.08 | 19.51 | 0.03 | 1.163 | 4.76 | 2.78 | 3.0 | 96.9 | 0.1 | -2.15 | 0.70 | 0.83 | 6.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 67641 | 6336 | 78 | 0 | 453 | 402 | 0 | logfile |
✔ | 7o6P | 12739 | 2022-05-12 | 2021-04-12 | 2.04 | 2.55 | — | 2.1 | 0.008 | 0.59 | 0.0 | 0.05 | 11.73 | 0.00 | 2.140 | 6.08 | 0.93 | 1.8 | 98.2 | 0.0 | -0.54 | 0.90 | 0.88 | 5.90 | 2.1 | 0.004 | 0.50 | 0.0 | 0.04 | 13.65 | 0.00 | 2.240 | 5.03 | 0.12 | 1.9 | 98.1 | 0.0 | 1.99 | 0.38 | 0.90 | 0.92 | 5.42 | 8276 | 1022 | 8 | 0 | 0 | 268 | 0 | logfile |
✘ | 7oY2 | 13108 | 2022-05-12 | 2021-06-23 | 2.06 | 2.12 | 2.05 | 2.2 | 0.006 | 0.92 | 1.0 | 0.05 | 15.87 | 0.01 | 1.171 | 13.44 | 0.42 | 0.8 | 99.2 | 0.0 | 1.10 | 0.77 | 0.84 | 5.16 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7166 | 858 | 7 | 0 | 7 | 24 | 0 | logfile |
✔ | 7JSX | 22462 | 2022-05-17 | 2020-08-16 | 2.06 | 2.05 | — | 2.1 | 0.022 | 1.67 | 2.0 | 0.11 | 11.97 | 0.01 | 2.201 | 6.88 | 1.26 | 3.9 | 96.1 | 0.0 | -1.03 | 0.74 | 0.76 | 5.10 | 2.0 | 0.012 | 1.10 | 0.0 | 0.04 | 14.60 | 0.00 | 2.135 | 9.41 | 0.80 | 2.4 | 97.6 | 0.0 | 1.01 | 0.64 | 0.82 | 0.89 | 6.51 | 38813 | 4832 | 40 | 0 | 0 | 1141 | 0 | logfile |
✔ | 7QKL | 14046 | 2022-05-12 | 2021-12-17 | 2.07 | 2.04 | 1.98 | 2.0 | 0.011 | 2.37 | 0.0 | 0.25 | 12.79 | 0.01 | 2.537 | 0.71 | 0.00 | 3.6 | 96.4 | 0.0 | -1.75 | 0.40 | 0.83 | 7.75 | 2.0 | 0.005 | 0.71 | 0.0 | 0.05 | 17.30 | 0.00 | 2.476 | 5.23 | 0.25 | 2.7 | 97.3 | 0.0 | -1.26 | 2.03 | 0.45 | 0.91 | 8.23 | 3468 | 456 | 6 | 0 | 0 | 0 | 0 | logfile |