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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7NJS | 12417 | 2022-05-15 | 2021-02-17 | 2.46 | 2.50 | — | 2.2 | 0.002 | 0.50 | 0.0 | 0.04 | 16.68 | 0.00 | 1.978 | 4.15 | 1.22 | 1.7 | 98.3 | 0.0 | 2.22 | 0.85 | 0.88 | 4.05 | 2.2 | 0.005 | 0.54 | 0.0 | 0.04 | 16.79 | 0.00 | 1.664 | 4.77 | 1.59 | 2.5 | 97.5 | 0.0 | 1.80 | 0.24 | 0.86 | 0.90 | 4.20 | 74642 | 4932 | 31 | 0 | 11 | 16 | 37346 | logfile |
✔ | 7P0M | 13148 | 2022-05-15 | 2021-06-30 | 2.75 | 3.51 | 2.75 | 2.7 | 0.002 | 0.44 | 0.0 | 0.04 | 16.31 | 0.00 | 1.800 | 7.70 | 1.88 | 1.7 | 98.3 | 0.0 | 1.65 | 0.95 | 0.88 | 2.52 | 2.8 | 0.002 | 0.49 | 0.0 | 0.04 | 16.49 | 0.00 | 2.005 | 9.02 | 2.07 | 1.7 | 98.3 | 0.0 | 1.67 | 0.24 | 0.96 | 0.89 | 2.22 | 25185 | 3185 | 19 | 0 | 45 | 0 | 0 | logfile |
✔ | 7NL0 | 12453 | 2022-05-13 | 2021-02-19 | 3.5 | 3.08 | — | 3.0 | 0.006 | 0.71 | 0.0 | 0.04 | 29.75 | 0.00 | 2.147 | 12.27 | 0.00 | 4.1 | 95.9 | 0.0 | 0.67 | 0.78 | 0.81 | 3.10 | 3.1 | 0.003 | 0.60 | 0.0 | 0.04 | 30.05 | 0.00 | 2.226 | 11.20 | 0.16 | 2.7 | 97.3 | 0.0 | 2.26 | 0.24 | 0.78 | 0.81 | 2.84 | 11363 | 755 | 10 | 262 | 0 | 0 | 0 | logfile |
✔ | 7A7C | 11677 | 2022-05-13 | 2020-08-27 | 3.16 | 3.66 | 3.23 | 3.5 | 0.003 | 0.54 | 0.0 | 0.04 | 13.51 | 0.00 | 2.199 | 6.79 | 0.00 | 4.5 | 95.5 | 0.0 | -0.97 | 0.82 | 0.87 | 3.57 | 3.5 | 0.005 | 0.55 | 0.0 | 0.04 | 14.63 | 0.00 | 2.108 | 6.90 | 0.11 | 5.1 | 94.9 | 0.0 | -0.29 | 0.24 | 0.83 | 0.89 | 3.27 | 9387 | 1226 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 7RZT | 24777 | 2022-05-12 | 2021-08-27 | 2.35 | 2.27 | — | 2.1 | 0.005 | 0.32 | 0.0 | 0.03 | 14.89 | 0.00 | 2.388 | 3.83 | 0.00 | 2.9 | 97.1 | 0.0 | 2.81 | 0.77 | 0.79 | 2.62 | 2.0 | 0.003 | 0.32 | 0.0 | 0.03 | 15.54 | 0.00 | 2.332 | 5.44 | 0.35 | 0.0 | 100.0 | 0.0 | 6.21 | 0.24 | 0.80 | 0.82 | 3.03 | 2451 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MW3 | 24061 | 2022-05-16 | 2021-05-15 | 3.15 | 3.04 | — | 3.0 | 0.004 | 0.68 | 1.0 | 0.07 | 13.41 | 0.01 | 1.549 | 7.71 | 0.33 | 3.5 | 96.1 | 0.4 | -0.38 | 0.82 | 0.83 | 3.24 | 3.0 | 0.004 | 0.74 | 0.0 | 0.05 | 14.32 | 0.01 | 1.960 | 9.00 | 0.11 | 3.6 | 96.1 | 0.3 | -0.31 | 0.25 | 0.83 | 0.85 | 3.14 | 33825 | 4295 | 33 | 0 | 72 | 0 | 0 | logfile |
✔ | 7NTC | 12587 | 2022-05-16 | 2021-03-09 | 3.6 | 4.35 | 3.76 | 4.1 | 0.004 | 0.60 | 0.0 | 0.05 | 14.34 | 0.00 | 2.165 | 7.67 | 0.00 | 6.7 | 93.2 | 0.1 | -0.97 | 0.84 | 0.83 | 1.67 | 4.1 | 0.008 | 0.79 | 1.0 | 0.04 | 15.28 | 0.00 | 2.052 | 8.99 | 0.09 | 6.9 | 92.9 | 0.1 | -0.91 | 0.25 | 0.83 | 0.82 | 1.61 | 30005 | 3698 | 33 | 0 | 81 | 0 | 0 | logfile |
✔ | 7T4N | 25681 | 2022-05-12 | 2021-12-10 | 2.35 | 2.66 | 2.38 | 2.5 | 0.002 | 0.42 | 0.0 | 0.04 | 16.22 | 0.00 | 2.207 | 4.39 | 1.25 | 1.0 | 99.0 | 0.0 | 0.87 | 0.63 | 0.85 | 3.82 | 2.6 | 0.002 | 0.46 | 0.0 | 0.04 | 16.43 | 0.00 | 2.291 | 6.16 | 1.94 | 1.5 | 98.5 | 0.0 | 1.69 | 0.25 | 0.66 | 0.87 | 3.63 | 6476 | 803 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UB6 | 26436 | 2022-05-15 | 2022-03-14 | 3.52 | 3.83 | 3.48 | 3.6 | 0.004 | 0.64 | 0.0 | 0.05 | 13.00 | 0.01 | 2.229 | 3.41 | 0.04 | 2.6 | 97.4 | 0.0 | -0.83 | 0.85 | 0.85 | 2.91 | 3.6 | 0.006 | 0.58 | 0.0 | 0.04 | 13.93 | 0.00 | 2.104 | 5.60 | 0.04 | 4.1 | 95.9 | 0.0 | 0.06 | 0.26 | 0.85 | 0.87 | 3.02 | 24762 | 3105 | 10 | 0 | 36 | 0 | 0 | logfile |
✔ | 7V2R | 31647 | 2022-05-14 | 2021-08-09 | 2.6 | 2.62 | — | 2.6 | 0.008 | 0.91 | 13.0 | 0.06 | 17.44 | 0.01 | 1.360 | 9.11 | 1.24 | 3.6 | 96.2 | 0.1 | 1.07 | 0.78 | 0.87 | 3.78 | 2.6 | 0.004 | 0.60 | 0.0 | 0.04 | 17.29 | 0.00 | 2.147 | 6.49 | 1.68 | 4.0 | 95.9 | 0.1 | 0.95 | 0.26 | 0.79 | 0.89 | 3.53 | 68260 | 8270 | 68 | 0 | 47 | 0 | 0 | logfile |
✔ | 6PCR | 20305 | 2022-05-15 | 2019-06-18 | 2.5 | 3.04 | — | 2.9 | 0.010 | 0.51 | 0.0 | 0.03 | 12.78 | 0.02 | 1.808 | 2.74 | 2.36 | 5.2 | 94.6 | 0.2 | -3.36 | 0.72 | 0.89 | 4.33 | 2.9 | 0.006 | 0.65 | 0.0 | 0.04 | 13.75 | 0.01 | 1.918 | 6.25 | 2.49 | 5.2 | 94.7 | 0.1 | -1.27 | 0.26 | 0.72 | 0.91 | 4.45 | 72166 | 967 | 8 | 3015 | 1 | 0 | 0 | logfile |
✔ | 7V2L | 31655 | 2022-05-12 | 2021-08-09 | 3.3 | 3.14 | 3.24 | 3.1 | 0.008 | 1.07 | 1.0 | 0.10 | 16.30 | 0.00 | 2.214 | 5.72 | 0.09 | 6.7 | 93.1 | 0.2 | -0.61 | 0.78 | 0.87 | 2.42 | 3.1 | 0.007 | 0.69 | 0.0 | 0.04 | 16.94 | 0.01 | 2.047 | 8.58 | 0.59 | 8.0 | 91.9 | 0.1 | -0.56 | 0.26 | 0.79 | 0.88 | 2.06 | 53410 | 2621 | 24 | 1507 | 2 | 0 | 0 | logfile |
✔ | 7K5i | 22681 | 2022-05-15 | 2020-09-16 | 2.9 | 3.01 | — | 3.0 | 0.004 | 0.63 | 0.0 | 0.04 | 15.78 | 0.01 | 2.031 | 6.60 | 0.00 | 3.7 | 96.3 | 0.0 | -1.25 | 0.76 | 0.82 | 3.57 | 3.0 | 0.008 | 0.86 | 0.0 | 0.05 | 17.16 | 0.01 | 2.039 | 7.36 | 2.64 | 4.7 | 95.2 | 0.0 | -0.76 | 0.26 | 0.79 | 0.84 | 3.15 | 74540 | 4881 | 40 | 1665 | 4 | 0 | 0 | logfile |
✔ | 7V7o | 31776 | 2022-05-15 | 2021-08-21 | 2.9 | 3.72 | — | 3.2 | 0.007 | 0.63 | 0.0 | 0.05 | 13.67 | 0.00 | 2.158 | 7.15 | 0.00 | 5.5 | 94.4 | 0.1 | -0.05 | 0.89 | 0.88 | 2.42 | 3.2 | 0.009 | 0.71 | 0.0 | 0.05 | 14.90 | 0.00 | 2.097 | 8.19 | 0.96 | 5.8 | 94.1 | 0.1 | -0.03 | 0.26 | 0.89 | 0.88 | 2.14 | 25325 | 3092 | 41 | 0 | 83 | 0 | 0 | logfile |
✔ | 7V7N | 31775 | 2022-05-15 | 2021-08-21 | 2.9 | 3.77 | — | 3.2 | 0.004 | 0.55 | 0.0 | 0.05 | 13.44 | 0.00 | 2.171 | 6.70 | 0.00 | 5.4 | 94.4 | 0.1 | 0.11 | 0.89 | 0.87 | 2.63 | 3.3 | 0.006 | 0.63 | 0.0 | 0.05 | 14.79 | 0.00 | 2.155 | 7.92 | 1.40 | 5.8 | 94.1 | 0.1 | 0.07 | 0.26 | 0.89 | 0.88 | 2.19 | 25430 | 3101 | 42 | 0 | 85 | 0 | 0 | logfile |
✔ | 7VLK | 32023 | 2022-05-16 | 2021-10-04 | 2.27 | 2.77 | — | 2.6 | 0.002 | 0.50 | 0.0 | 0.04 | 17.01 | 0.00 | 2.195 | 6.63 | 2.51 | 2.0 | 98.0 | 0.0 | 1.38 | 0.76 | 0.84 | 3.20 | 2.6 | 0.003 | 0.56 | 0.0 | 0.04 | 17.13 | 0.00 | 2.162 | 6.68 | 2.98 | 2.6 | 97.4 | 0.0 | 1.39 | 0.27 | 0.77 | 0.86 | 3.26 | 28774 | 3698 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XL6 | 22235 | 2022-05-12 | 2020-06-28 | 3.0 | 3.41 | — | 3.3 | 0.033 | 0.71 | 0.0 | 0.10 | 20.19 | 0.00 | 2.257 | 5.42 | 0.00 | 0.0 | 100.0 | 0.0 | -1.93 | 0.76 | 0.83 | 2.94 | 3.3 | 0.006 | 0.81 | 0.0 | 0.07 | 20.85 | 0.01 | 2.004 | 11.44 | 0.61 | 0.0 | 100.0 | 0.0 | -1.45 | 0.27 | 0.75 | 0.84 | 3.03 | 5456 | 536 | 6 | 46 | 4 | 0 | 0 | logfile |
✔ | 6YPU | 10869 | 2022-05-16 | 2020-04-16 | 2.9 | 2.97 | 2.78 | 2.9 | 0.012 | 0.99 | 0.0 | 0.06 | 16.54 | 0.01 | 1.849 | 6.04 | 11.02 | 9.3 | 90.5 | 0.2 | -3.96 | 0.78 | 0.85 | 2.54 | 2.9 | 0.004 | 0.59 | 0.0 | 0.04 | 15.86 | 0.00 | 1.871 | 5.18 | 7.52 | 6.1 | 93.9 | 0.0 | -0.91 | 0.27 | 0.79 | 0.86 | 2.25 | 33322 | 1496 | 17 | 1040 | 60 | 0 | 0 | logfile |
✔ | 7V7R | 31779 | 2022-05-15 | 2021-08-21 | 2.9 | 3.74 | — | 3.2 | 0.003 | 0.54 | 0.0 | 0.04 | 13.33 | 0.00 | 2.163 | 6.36 | 0.00 | 4.5 | 95.4 | 0.1 | 0.06 | 0.89 | 0.87 | 2.64 | 3.2 | 0.005 | 0.59 | 0.0 | 0.04 | 14.60 | 0.00 | 2.144 | 7.28 | 1.11 | 4.9 | 95.0 | 0.1 | 0.20 | 0.27 | 0.88 | 0.87 | 2.29 | 25362 | 3095 | 42 | 0 | 84 | 0 | 0 | logfile |
✔ | 7TMQ | 25999 | 2022-05-16 | 2022-01-19 | 3.3 | 3.42 | — | 3.4 | 0.004 | 0.57 | 2.0 | 0.04 | 12.67 | 0.00 | 2.026 | 10.03 | 0.38 | 2.7 | 97.3 | 0.0 | 1.28 | 0.77 | 0.83 | 3.33 | 3.3 | 0.003 | 0.53 | 0.0 | 0.04 | 13.93 | 0.00 | 1.963 | 9.43 | 0.43 | 2.7 | 97.3 | 0.0 | 1.28 | 0.27 | 0.79 | 0.86 | 2.85 | 31642 | 4736 | 16 | 0 | 2 | 0 | 0 | logfile |