Table showing results for October 2021

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	6ZPi	11340	2021-10-03	2020-07-08	4.5	4.63	—	4.4	0.014	1.17	3.0	0.07	15.30	0.01	1.667	13.68	0.00	4.6	95.4	0.0	-0.24	0.77	0.52	—	4.4	0.003	0.73	0.0	0.04	14.12	0.00	1.975	16.48	0.00	3.7	96.3	0.0	0.34	1.80	0.85	0.79	—	9412	1184	6	1	5	0	0	logfile
✔	7L1F	23109	2021-10-03	2020-12-14	3.89	2.82	—	2.2	0.008	1.36	3.0	0.08	13.38	0.01	2.323	3.10	0.00	6.6	93.4	0.0	-4.38	0.72	0.70	2.25	2.4	0.004	0.76	0.0	0.04	15.35	0.01	1.155	13.04	1.12	7.1	92.9	0.0	-1.50	1.23	0.73	0.71	1.41	8825	1009	5	31	4	0	0	logfile
✔	6VL6	21231	2021-10-05	2020-01-22	4.6	5.00	4.54	4.6	0.019	1.46	0.0	0.09	11.38	0.01	2.431	0.28	0.00	0.9	99.1	0.0	0.45	0.87	0.83	—	4.6	0.004	0.66	0.0	0.04	13.00	0.00	2.211	18.43	0.00	2.2	97.8	0.0	1.57	2.01	0.81	0.75	—	21504	2640	24	0	0	0	0	logfile
✔	6Z1R	11039	2021-10-04	2020-05-14	3.29	3.42	3.09	3.3	0.007	0.71	0.0	0.04	15.06	0.00	1.890	9.02	0.00	6.6	93.4	0.0	-1.25	0.69	0.83	2.88	3.3	0.004	0.56	0.0	0.04	16.00	0.00	1.757	7.52	0.09	4.9	95.1	0.0	0.13	1.54	0.70	0.85	2.44	65754	4278	32	0	11	17	33137	logfile
✔	6WFU	21657	2021-10-19	2020-04-04	3.03	3.40	—	3.3	0.009	0.89	0.0	0.05	8.71	0.01	2.191	11.37	0.00	2.7	97.3	0.0	-1.73	0.77	0.88	5.59	3.3	0.004	0.67	0.0	0.04	13.23	0.00	2.130	6.61	0.18	4.0	96.0	0.0	-0.87	3.71	0.71	0.87	4.90	245100	30780	60	0	0	0	0	logfile
✔	6VN1	21247	2021-10-06	2020-01-29	2.8	2.97	2.75	3.0	0.006	0.63	0.0	0.05	13.28	0.00	2.123	7.52	0.00	6.3	93.7	0.0	-3.36	0.70	0.80	3.79	3.0	0.004	0.66	0.0	0.05	16.03	0.00	2.170	7.03	2.59	6.3	93.7	0.0	-1.16	0.45	0.74	0.83	3.44	19524	2454	9	0	0	0	0	logfile
✔	6YY0	11001	2021-10-03	2020-05-04	3.23	3.34	3.07	3.3	0.006	0.68	0.0	0.04	15.27	0.00	1.847	8.05	0.00	8.4	91.6	0.0	-0.84	0.72	0.84	2.97	3.3	0.006	0.74	1.0	0.04	16.15	0.00	1.815	6.35	0.12	4.3	95.7	0.0	0.24	0.34	0.73	0.85	2.67	61162	3926	25	0	11	17	30826	logfile
✔	7KWZ	23059	2021-10-03	2020-12-02	3.2	3.41	—	3.4	0.006	0.80	0.0	0.05	12.48	0.00	2.271	12.59	0.00	7.3	92.7	0.0	-5.51	0.47	0.81	4.47	3.4	0.005	0.88	0.0	0.04	15.06	0.01	2.118	15.76	0.23	10.4	89.6	0.0	-5.39	1.05	0.50	0.84	4.14	4695	695	5	0	0	0	0	logfile
✔	6ZiK	11227	2021-10-03	2020-06-26	3.66	3.14	3.54	3.4	0.005	0.71	0.0	0.04	14.22	0.00	2.134	9.91	0.00	2.0	98.0	0.0	1.08	0.55	0.78	2.12	3.4	0.003	0.61	0.0	0.04	16.50	0.01	2.191	8.71	0.65	2.0	98.0	0.0	2.04	0.46	0.55	0.78	1.61	7735	1048	11	0	0	0	0	logfile
✔	6oJQ	20092	2021-10-05	2019-04-12	3.67	3.91	—	3.8	0.008	0.78	0.0	0.04	10.32	0.00	2.000	3.54	0.00	4.0	96.0	0.0	-3.02	0.57	0.74	2.96	3.8	0.003	0.53	0.0	0.04	12.96	0.00	1.918	8.19	0.10	3.5	96.5	0.0	-0.53	2.74	0.66	0.82	3.08	18055	1164	5	0	4	0	8878	logfile
✔	6W6W	21567	2021-10-04	2020-03-17	3.0	3.23	—	3.1	0.006	0.99	1.0	0.06	14.87	0.01	2.303	2.69	0.00	12.1	87.6	0.3	-5.09	0.64	0.84	3.49	3.1	0.004	0.75	0.0	0.05	16.44	0.00	2.225	7.30	1.68	10.0	89.9	0.1	-2.30	1.20	0.66	0.86	3.24	10981	1388	6	4	1	0	0	logfile
✔	6VFK	21185	2021-10-06	2020-01-05	4.25	4.39	4.20	4.3	0.021	1.41	0.0	0.09	10.30	0.01	2.389	0.32	0.00	1.3	98.7	0.0	2.59	0.84	0.81	—	4.2	0.003	0.56	0.0	0.04	13.15	0.00	2.189	9.10	0.03	1.6	98.2	0.2	4.36	1.08	0.84	0.83	—	37032	4764	24	0	0	0	0	logfile
✔	6ZiQ	11228	2021-10-05	2020-06-26	4.33	3.58	4.02	3.4	0.005	0.73	0.0	0.08	14.67	0.00	1.911	18.83	0.00	8.6	91.4	0.0	-1.50	0.48	0.72	—	3.4	0.003	0.61	0.0	0.08	14.68	0.00	1.960	12.06	0.08	4.5	95.5	0.0	1.03	0.61	0.47	0.71	—	22255	1385	15	0	0	0	11316	logfile
✔	6ZG7	11195	2021-10-04	2020-06-18	3.49	3.18	3.39	3.4	0.006	0.64	0.0	0.04	14.31	0.00	2.002	9.98	0.00	4.7	95.3	0.0	-0.05	0.54	0.78	2.53	3.4	0.004	0.56	0.0	0.04	15.82	0.00	1.988	7.82	0.26	3.7	96.3	0.0	1.18	0.48	0.55	0.79	2.12	15587	1048	11	0	0	0	7852	logfile
✔	6Z1U	11040	2021-10-04	2020-05-14	3.47	3.57	3.25	3.5	0.008	0.74	0.0	0.05	14.83	0.00	1.905	11.32	0.00	8.9	91.1	0.0	-1.62	0.68	0.83	2.33	3.5	0.006	0.61	0.0	0.04	15.78	0.00	1.713	9.65	0.21	7.3	92.7	0.0	-0.45	0.41	0.69	0.85	2.17	65073	4239	32	0	11	17	32803	logfile
✔	6YJ5	10816	2021-10-03	2020-04-02	3.5	2.92	3.56	3.3	0.007	0.87	0.0	0.05	13.19	0.01	2.183	4.49	0.00	12.5	87.5	0.0	-5.13	0.42	0.62	3.01	3.3	0.005	0.75	0.0	0.05	15.53	0.01	2.236	8.98	0.61	10.2	89.8	0.0	-2.25	0.85	0.51	0.73	2.85	2061	306	1	0	0	0	0	logfile
✔	6ZQM	11368	2021-10-06	2020-07-10	3.29	3.42	—	3.3	0.009	0.83	0.0	0.12	15.35	0.00	1.787	11.92	0.00	8.1	91.9	0.0	-1.08	0.73	0.82	2.58	3.3	0.003	0.55	0.0	0.04	16.01	0.00	1.825	8.39	0.19	3.8	96.2	0.0	0.65	0.42	0.71	0.82	2.02	80462	5155	42	0	16	17	40460	logfile
✔	6ZiT	11229	2021-10-05	2020-06-26	3.49	3.68	4.20	3.5	0.005	0.74	0.0	0.04	15.18	0.01	1.968	22.00	0.00	10.6	89.4	0.0	-1.92	0.49	0.72	0.69	3.5	0.013	1.07	1.0	0.04	16.76	0.01	1.956	13.68	0.00	5.4	94.6	0.0	0.29	0.59	0.49	0.72	0.42	20646	1300	15	0	0	0	10446	logfile
✔	6ZRQ	11382	2021-10-03	2020-07-14	3.9	4.06	—	4.2	0.014	1.20	0.0	0.05	12.20	0.00	2.597	20.13	0.00	5.0	95.0	0.0	-4.20	0.64	0.62	3.62	4.2	0.003	0.74	0.0	0.04	13.08	0.00	2.142	20.64	2.31	18.3	81.7	0.0	-6.23	2.16	0.70	0.77	2.54	3816	276	12	0	0	0	1776	logfile
✔	6PM6	20389	2021-10-04	2019-07-01	2.9	3.37	—	3.4	0.004	0.89	0.0	0.05	10.24	0.01	2.335	5.13	0.00	4.9	95.1	0.0	-4.86	0.54	0.80	4.25	3.4	0.003	0.74	0.0	0.04	15.77	0.01	2.220	8.65	2.24	4.9	95.1	0.0	-0.68	0.76	0.53	0.80	3.55	14100	1735	15	0	15	0	0	logfile

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