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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7XMR | 33302 | 2023-02-17 | 2022-04-26 | 3.1 | 3.31 | 2.93 | 3.3 | 0.001 | 0.40 | 0.0 | 0.04 | 10.86 | 0.00 | 2.250 | 5.63 | 0.00 | 1.6 | 98.4 | 0.0 | -3.39 | 0.52 | 0.64 | 1.08 | 3.3 | 0.003 | 0.65 | 0.0 | 0.04 | 14.81 | 0.00 | 2.142 | 12.96 | 0.29 | 4.1 | 95.9 | 0.0 | 0.09 | 0.66 | 0.59 | 0.74 | 1.37 | 6611 | 871 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7FiY | 31606 | 2023-02-19 | 2021-08-01 | 3.4 | 3.64 | — | 3.6 | 0.004 | 0.82 | 0.0 | 0.06 | 8.14 | 0.01 | 2.275 | 3.69 | 0.00 | 2.6 | 97.4 | 0.0 | -1.10 | 0.67 | 0.75 | 2.44 | 3.6 | 0.003 | 0.58 | 0.0 | 0.04 | 14.14 | 0.00 | 2.105 | 9.47 | 0.31 | 2.5 | 97.5 | 0.0 | 1.25 | 1.71 | 0.70 | 0.80 | 2.00 | 9367 | 1152 | 7 | 0 | 6 | 0 | 0 | logfile |
✔ | 7EW4 | 31347 | 2023-02-18 | 2021-05-24 | 3.2 | 3.38 | — | 3.4 | 0.003 | 0.51 | 0.0 | 0.04 | 13.43 | 0.00 | 2.237 | 7.77 | 0.00 | 2.0 | 98.0 | 0.0 | 1.05 | 0.67 | 0.74 | 2.41 | 3.4 | 0.002 | 0.52 | 0.0 | 0.04 | 15.13 | 0.00 | 2.101 | 8.96 | 0.62 | 2.8 | 97.2 | 0.0 | 0.62 | 0.39 | 0.70 | 0.81 | 2.46 | 8929 | 1145 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 7T6P | 25723 | 2023-02-23 | 2021-12-14 | 2.8 | 3.33 | — | 3.3 | 0.005 | 1.13 | 0.0 | 0.06 | 14.54 | 0.01 | 2.310 | 3.72 | 0.00 | 4.0 | 96.0 | 0.0 | -3.37 | 0.59 | 0.76 | 2.86 | 3.3 | 0.003 | 0.66 | 0.0 | 0.04 | 17.05 | 0.00 | 2.172 | 10.89 | 1.67 | 4.4 | 95.6 | 0.0 | 0.50 | 0.50 | 0.54 | 0.74 | 2.44 | 19412 | 2424 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TTH | 26115 | 2023-02-20 | 2022-02-01 | 3.25 | 3.81 | — | 3.7 | 0.003 | 0.69 | 0.0 | 0.05 | 12.15 | 0.00 | 2.232 | 7.80 | 0.00 | 4.5 | 95.5 | 0.0 | -0.01 | 0.55 | 0.71 | 1.99 | 3.7 | 0.003 | 0.64 | 0.0 | 0.04 | 14.39 | 0.00 | 2.131 | 6.49 | 0.08 | 3.8 | 96.2 | 0.0 | 0.60 | 0.54 | 0.65 | 0.79 | 1.78 | 12698 | 1750 | 8 | 0 | 10 | 0 | 0 | logfile |
✔ | 7VQQ | 32092 | 2023-02-16 | 2021-10-20 | 2.9 | 2.61 | — | 3.1 | 0.009 | 0.85 | 0.0 | 0.05 | 11.51 | 0.01 | 2.233 | 2.50 | 0.00 | 12.4 | 87.6 | 0.0 | -6.09 | 0.47 | 0.86 | 4.62 | 3.1 | 0.006 | 0.80 | 0.0 | 0.04 | 12.91 | 0.00 | 2.234 | 2.21 | 0.91 | 5.6 | 94.4 | 0.0 | -4.97 | 0.28 | 0.48 | 0.87 | 4.95 | 1968 | 273 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7WF7 | 32461 | 2023-02-18 | 2021-12-26 | 3.4 | 3.19 | — | 3.2 | 0.004 | 0.83 | 0.0 | 0.05 | 13.56 | 0.00 | 2.288 | 2.88 | 0.00 | 4.4 | 95.6 | 0.0 | -1.14 | 0.55 | 0.64 | 1.44 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8136 | 1034 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7UVT | 26816 | 2023-02-20 | 2022-05-02 | 3.9 | 4.17 | 4.00 | 4.1 | 0.001 | 0.41 | 0.0 | 0.02 | 16.13 | 0.00 | 1.897 | 6.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.76 | 0.74 | — | 4.1 | 0.006 | 0.70 | 0.0 | 0.04 | 17.94 | 0.01 | 1.892 | 21.35 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.48 | 0.77 | 0.76 | — | 12409 | 0 | 1 | 386 | 0 | 0 | 4149 | logfile |
✔ | 7TJT | 25931 | 2023-02-24 | 2022-01-17 | 3.2 | 3.46 | 3.29 | 3.4 | 0.003 | 0.63 | 0.0 | 0.05 | 12.67 | 0.00 | 1.991 | 3.26 | 0.00 | 1.2 | 98.8 | 0.0 | 0.60 | 0.75 | 0.85 | 3.19 | 3.4 | 0.003 | 0.54 | 0.0 | 0.04 | 14.62 | 0.00 | 2.005 | 6.04 | 0.04 | 1.7 | 98.3 | 0.0 | 1.23 | 2.65 | 0.75 | 0.86 | 2.61 | 23129 | 3099 | 11 | 0 | 7 | 0 | 0 | logfile |
✔ | 7SP7 | 25367 | 2023-02-18 | 2021-11-02 | 3.1 | 3.61 | — | 3.5 | 0.008 | 0.68 | 0.0 | 0.05 | 13.90 | 0.00 | 2.219 | 3.57 | 0.00 | 1.4 | 98.6 | 0.0 | 2.52 | 0.60 | 0.73 | 1.83 | 3.5 | 0.003 | 0.52 | 0.0 | 0.04 | 15.63 | 0.00 | 2.219 | 5.74 | 0.32 | 1.9 | 98.1 | 0.0 | 1.72 | 0.58 | 0.67 | 0.81 | 3.22 | 6052 | 739 | 4 | 1 | 4 | 0 | 0 | logfile |
✔ | 7T6Q | 25724 | 2023-02-23 | 2021-12-14 | 3.4 | 3.68 | — | 3.7 | 0.006 | 1.29 | 2.0 | 0.06 | 15.20 | 0.01 | 2.282 | 4.88 | 0.00 | 3.9 | 96.1 | 0.0 | -3.87 | 0.68 | 0.77 | 2.18 | 3.7 | 0.004 | 0.73 | 0.0 | 0.04 | 16.59 | 0.00 | 2.187 | 11.75 | 0.48 | 4.7 | 95.3 | 0.0 | -0.46 | 1.18 | 0.71 | 0.83 | 2.17 | 19600 | 2424 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 7RQX | 24639 | 2023-02-27 | 2021-08-08 | 3.36 | 3.59 | — | 3.5 | 0.012 | 1.06 | 0.0 | 0.06 | 16.98 | 0.01 | 2.227 | 8.03 | 0.00 | 3.4 | 96.6 | 0.0 | -0.29 | 0.67 | 0.75 | 2.39 | 3.5 | 0.003 | 0.48 | 0.0 | 0.03 | 16.18 | 0.00 | 2.021 | 8.41 | 0.07 | 3.9 | 96.1 | 0.0 | 0.47 | 1.13 | 0.67 | 0.80 | 2.59 | 30450 | 2016 | 8 | 0 | 26 | 0 | 14344 | logfile |
✔ | 7Eo2 | 31225 | 2023-02-18 | 2021-04-21 | 2.89 | 3.28 | — | 3.4 | 0.005 | 0.77 | 0.0 | 0.05 | 13.25 | 0.00 | 2.152 | 0.90 | 0.00 | 4.1 | 95.9 | 0.0 | -0.60 | 0.59 | 0.72 | 2.59 | 3.4 | 0.003 | 0.61 | 0.0 | 0.04 | 15.32 | 0.00 | 2.143 | 7.00 | 1.75 | 3.0 | 97.0 | 0.0 | 1.01 | 0.50 | 0.49 | 0.66 | 2.06 | 8865 | 1126 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7KiP | 22889 | 2023-02-27 | 2020-10-24 | 3.39 | 4.00 | 3.47 | 3.9 | 0.009 | 0.90 | 0.0 | 0.06 | 8.62 | 0.01 | 2.290 | 1.86 | 0.00 | 7.9 | 92.1 | 0.1 | -4.05 | 0.83 | 0.84 | 3.42 | 3.9 | 0.003 | 0.55 | 0.0 | 0.04 | 11.32 | 0.00 | 2.214 | 4.09 | 0.13 | 5.8 | 94.2 | 0.0 | -1.42 | 0.57 | 0.85 | 0.87 | 2.65 | 30612 | 3576 | 69 | 0 | 222 | 0 | 0 | logfile |
✔ | 3JD3 | 6632 | 2023-02-24 | 2016-03-28 | 3.6 | 3.38 | — | 3.5 | 0.011 | 1.02 | 0.0 | 0.06 | 11.40 | 0.01 | 2.125 | 18.17 | 0.00 | 10.7 | 89.3 | 0.0 | -5.32 | 0.81 | 0.80 | 2.72 | 3.2 | 0.003 | 0.65 | 0.0 | 0.04 | 15.34 | 0.00 | 2.140 | 12.61 | 0.28 | 4.0 | 96.0 | 0.0 | -0.42 | 1.00 | 0.81 | 0.83 | 2.27 | 24006 | 2976 | 12 | 0 | 18 | 0 | 0 | logfile |
✔ | 8DN8 | 27556 | 2023-02-20 | 2022-07-10 | 3.7 | 4.03 | 3.79 | 4.0 | 0.003 | 0.61 | 0.0 | 0.04 | 13.76 | 0.00 | 2.157 | 9.82 | 0.00 | 6.0 | 94.0 | 0.0 | -0.14 | 0.72 | 0.82 | 1.16 | 3.9 | 0.003 | 0.66 | 0.0 | 0.04 | 16.11 | 0.00 | 2.185 | 11.45 | 0.60 | 5.6 | 94.4 | 0.0 | -0.15 | 0.57 | 0.72 | 0.81 | 1.19 | 10638 | 1300 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 7TJU | 25932 | 2023-02-24 | 2022-01-17 | 3.3 | 3.57 | 3.40 | 3.5 | 0.002 | 0.59 | 0.0 | 0.05 | 11.98 | 0.00 | 2.070 | 2.00 | 0.00 | 1.4 | 98.6 | 0.0 | 0.36 | 0.77 | 0.84 | 3.19 | 3.5 | 0.002 | 0.55 | 0.0 | 0.04 | 14.31 | 0.00 | 1.966 | 6.06 | 0.27 | 1.8 | 98.2 | 0.0 | 0.94 | 0.52 | 0.79 | 0.87 | 2.50 | 22687 | 3102 | 11 | 0 | 7 | 0 | 0 | logfile |
✔ | 7TJS | 25930 | 2023-02-24 | 2022-01-17 | 3.2 | 3.47 | 3.27 | 3.4 | 0.003 | 0.60 | 0.0 | 0.05 | 12.62 | 0.00 | 1.901 | 1.77 | 0.00 | 1.5 | 98.5 | 0.0 | 0.55 | 0.78 | 0.85 | 3.14 | 3.4 | 0.006 | 0.65 | 0.0 | 0.05 | 15.00 | 0.00 | 1.883 | 5.67 | 0.16 | 2.6 | 97.4 | 0.0 | 0.79 | 0.54 | 0.73 | 0.86 | 2.54 | 23539 | 3102 | 12 | 0 | 8 | 0 | 0 | logfile |
✔ | 7URG | 26712 | 2023-02-17 | 2022-04-21 | 3.46 | 3.69 | 3.49 | 3.7 | 0.002 | 0.50 | 0.0 | 0.04 | 15.44 | 0.00 | 2.229 | 4.69 | 0.00 | 3.5 | 96.5 | 0.0 | 0.73 | 0.69 | 0.75 | 2.59 | 3.7 | 0.004 | 0.59 | 0.0 | 0.04 | 16.80 | 0.00 | 2.242 | 5.34 | 0.15 | 5.8 | 94.2 | 0.0 | -0.19 | 0.50 | 0.74 | 0.79 | 2.15 | 6260 | 802 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 6VE3 | 21153 | 2023-02-24 | 2019-12-28 | 4.3 | 4.68 | 4.39 | 4.4 | 0.005 | 1.17 | 2.0 | 0.07 | 5.96 | 0.01 | 2.179 | 22.46 | 0.00 | 3.4 | 96.3 | 0.3 | -0.31 | 0.81 | 0.69 | — | 4.4 | 0.004 | 0.91 | 0.0 | 0.05 | 7.54 | 0.00 | 2.122 | 11.06 | 0.00 | 11.2 | 88.8 | 0.0 | -2.55 | 1.90 | 0.82 | 0.82 | — | 22484 | 4578 | 14 | 0 | 0 | 0 | 0 | logfile |