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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7W7U | 32348 | 2023-08-10 | 2021-12-06 | 3.0 | 2.54 | 2.92 | 2.9 | 0.003 | 0.56 | 0.0 | 0.04 | 12.54 | 0.00 | 1.966 | 7.56 | 0.00 | 2.6 | 97.4 | 0.0 | 0.77 | 0.59 | 0.77 | 1.85 | 3.0 | 0.003 | 0.56 | 0.0 | 0.04 | 16.36 | 0.00 | 2.048 | 8.38 | 2.32 | 3.0 | 97.0 | 0.0 | 0.46 | 1.31 | 0.60 | 0.80 | 1.76 | 7833 | 1015 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7QL1 | 14060 | 2023-08-09 | 2021-12-19 | 3.34 | 3.41 | 3.13 | 3.4 | 0.011 | 2.01 | 0.0 | 0.10 | 11.06 | 0.01 | 2.654 | 0.29 | 0.00 | 7.5 | 92.5 | 0.0 | -3.09 | 0.42 | 0.83 | 4.57 | 3.4 | 0.007 | 0.85 | 0.0 | 0.05 | 15.42 | 0.00 | 2.104 | 12.32 | 0.00 | 4.2 | 95.8 | 0.0 | -2.34 | 1.74 | 0.39 | 0.81 | 4.21 | 1671 | 219 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QDR | 13923 | 2023-08-17 | 2021-11-29 | 3.7 | 3.84 | 3.50 | 3.7 | 0.006 | 0.84 | 0.0 | 0.05 | 14.04 | 0.01 | 2.021 | 12.64 | 0.00 | 5.9 | 94.0 | 0.1 | -1.43 | 0.81 | 0.86 | 2.06 | 3.7 | 0.002 | 0.65 | 0.0 | 0.04 | 15.68 | 0.00 | 2.139 | 8.12 | 0.25 | 9.6 | 90.4 | 0.0 | -0.24 | 1.15 | 0.80 | 0.84 | 1.80 | 22818 | 2991 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6G51 | 4350 | 2023-08-27 | 2018-03-28 | 4.1 | 4.42 | — | 4.0 | 0.007 | 1.44 | 22.0 | 0.10 | 21.21 | 0.00 | 0.264 | 3.79 | 0.00 | 7.0 | 92.3 | 0.8 | -2.90 | 0.71 | 0.63 | — | 3.9 | 0.005 | 0.87 | 0.0 | 0.04 | 22.63 | 0.00 | 1.977 | 12.39 | 0.00 | 13.4 | 86.5 | 0.1 | -2.16 | 1.66 | 0.81 | 0.69 | — | 50662 | 6237 | 38 | 1659 | 0 | 0 | 0 | logfile |
✔ | 7W7W | 32350 | 2023-08-10 | 2021-12-06 | 3.2 | 2.98 | 3.22 | 3.2 | 0.003 | 1.16 | 0.0 | 0.04 | 13.44 | 0.00 | 2.051 | 8.21 | 0.00 | 2.9 | 97.1 | 0.0 | 0.82 | 0.59 | 0.74 | 2.05 | 3.2 | 0.002 | 0.84 | 0.0 | 0.04 | 15.74 | 0.00 | 1.537 | 8.97 | 0.23 | 3.9 | 96.1 | 0.0 | 0.72 | 0.38 | 0.58 | 0.75 | 1.99 | 7870 | 1018 | 1 | 0 | 2 | 0 | 0 | logfile |
✘ | 6G53 | 4351 | 2023-08-27 | 2018-03-28 | 4.5 | 4.86 | — | 4.3 | 0.007 | 1.44 | 21.0 | 0.10 | 21.32 | 0.00 | 1.260 | 2.52 | 0.00 | 7.1 | 92.2 | 0.7 | -2.88 | 0.67 | 0.54 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 49052 | 5912 | 37 | 1659 | 0 | 0 | 0 | logfile |
✔ | 7NK9 | 12434 | 2023-08-15 | 2021-02-17 | 2.9 | 3.29 | — | 3.2 | 0.003 | 0.50 | 0.0 | 0.04 | 13.03 | 0.00 | 2.087 | 6.80 | 0.00 | 2.9 | 97.1 | 0.0 | 1.61 | 0.68 | 0.86 | 1.78 | 3.2 | 0.004 | 0.55 | 0.0 | 0.04 | 15.16 | 0.00 | 2.081 | 6.69 | 1.39 | 0.9 | 99.1 | 0.0 | 3.96 | 0.45 | 0.68 | 0.88 | 1.31 | 18081 | 1225 | 14 | 0 | 0 | 0 | 9158 | logfile |
✔ | 6NT6 | 0503 | 2023-08-09 | 2019-01-28 | 4.0 | 4.22 | — | 4.1 | 0.005 | 0.79 | 0.0 | 0.04 | 11.99 | 0.01 | 2.316 | 3.70 | 0.00 | 3.8 | 96.2 | 0.0 | -3.32 | 0.69 | 0.80 | — | 4.1 | 0.002 | 0.72 | 0.0 | 0.04 | 15.61 | 0.00 | 2.295 | 7.27 | 0.00 | 2.7 | 97.3 | 0.0 | 1.43 | 1.19 | 0.69 | 0.80 | — | 4198 | 556 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Ni2 | 12349 | 2023-08-21 | 2021-02-11 | 2.89 | 3.11 | — | 3.0 | 0.007 | 0.70 | 0.0 | 0.05 | 11.38 | 0.00 | 2.198 | 11.77 | 0.00 | 3.2 | 96.8 | 0.0 | -1.51 | 0.78 | 0.86 | 2.96 | 3.0 | 0.003 | 0.69 | 0.0 | 0.05 | 14.58 | 0.00 | 2.200 | 9.45 | 1.39 | 3.2 | 96.8 | 0.0 | 0.40 | 0.49 | 0.77 | 0.88 | 2.31 | 31344 | 4080 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oRE | 17121 | 2023-08-09 | 2023-04-13 | 2.5 | 2.67 | 2.44 | 2.7 | 0.011 | 2.09 | 7.0 | 0.14 | 10.93 | 0.01 | 2.570 | 0.00 | 0.00 | 8.0 | 92.0 | 0.0 | -2.10 | 0.32 | 0.74 | 5.29 | 2.7 | 0.003 | 0.69 | 0.0 | 0.05 | 17.33 | 0.00 | 2.218 | 3.60 | 1.00 | 6.7 | 93.3 | 0.0 | -1.84 | 3.46 | 0.37 | 0.81 | 5.04 | 3615 | 231 | 3 | 0 | 0 | 0 | 1845 | logfile |
✔ | 7E2i | 30958 | 2023-08-11 | 2021-02-05 | 4.07 | 4.31 | — | 4.1 | 0.006 | 0.82 | 0.0 | 0.05 | 14.31 | 0.00 | 2.056 | 20.89 | 0.00 | 11.7 | 88.2 | 0.1 | -4.32 | 0.62 | 0.79 | — | 4.2 | 0.004 | 0.81 | 0.0 | 0.04 | 14.31 | 0.00 | 2.147 | 15.65 | 0.00 | 10.3 | 89.7 | 0.0 | -1.49 | 1.29 | 0.60 | 0.77 | — | 8569 | 1058 | 4 | 0 | 12 | 0 | 0 | logfile |
✔ | 7UWQ | 26838 | 2023-08-16 | 2022-05-03 | 3.05 | 3.55 | 3.19 | 3.5 | 0.005 | 0.57 | 0.0 | 0.04 | 13.81 | 0.00 | 2.313 | 3.18 | 0.00 | 3.0 | 97.0 | 0.0 | -0.63 | 0.70 | 0.86 | 3.23 | 3.5 | 0.003 | 0.52 | 0.0 | 0.04 | 15.19 | 0.00 | 2.309 | 4.41 | 0.09 | 2.4 | 97.6 | 0.0 | 0.30 | 0.23 | 0.72 | 0.87 | 2.61 | 20538 | 2598 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JKQ | 22367 | 2023-08-14 | 2020-07-28 | 3.3 | 3.23 | — | 3.3 | 0.007 | 1.22 | 1.0 | 0.07 | 14.74 | 0.01 | 2.238 | 6.34 | 0.00 | 6.2 | 93.8 | 0.0 | -3.03 | 0.70 | 0.80 | 3.30 | 3.3 | 0.003 | 0.66 | 0.0 | 0.04 | 16.33 | 0.00 | 2.069 | 12.87 | 0.45 | 5.7 | 94.3 | 0.0 | -0.96 | 1.02 | 0.67 | 0.83 | 3.07 | 16437 | 2048 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7W9E | 32365 | 2023-08-19 | 2021-12-09 | 3.1 | 2.99 | — | 2.8 | 0.004 | 0.58 | 0.0 | 0.04 | 12.89 | 0.00 | 2.028 | 3.16 | 0.00 | 3.9 | 96.1 | 0.0 | -3.93 | 0.76 | 0.71 | 2.09 | 2.8 | 0.003 | 0.57 | 0.0 | 0.04 | 15.42 | 0.00 | 2.154 | 7.94 | 0.22 | 3.8 | 96.2 | 0.0 | -0.51 | 0.90 | 0.79 | 0.78 | 1.89 | 28181 | 3611 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TBY | 25801 | 2023-08-13 | 2021-12-22 | 4.0 | 4.05 | 3.80 | 3.9 | 0.003 | 0.61 | 0.0 | 0.04 | 12.90 | 0.00 | 2.155 | 7.36 | 0.00 | 5.0 | 95.0 | 0.0 | -2.45 | 0.70 | 0.79 | — | 3.8 | 0.003 | 0.65 | 0.0 | 0.04 | 15.01 | 0.00 | 2.125 | 7.99 | 0.33 | 5.6 | 94.4 | 0.0 | 0.45 | 1.06 | 0.72 | 0.82 | — | 13281 | 1788 | 4 | 0 | 10 | 0 | 0 | logfile |
✔ | 7Nii | 12360 | 2023-08-24 | 2021-02-12 | 2.88 | 3.06 | — | 3.0 | 0.006 | 0.69 | 0.0 | 0.04 | 11.05 | 0.00 | 1.216 | 12.41 | 0.00 | 3.4 | 96.6 | 0.1 | -2.73 | 0.76 | 0.85 | 3.60 | 3.0 | 0.003 | 0.68 | 0.0 | 0.04 | 14.36 | 0.00 | 1.983 | 8.08 | 1.40 | 3.5 | 96.5 | 0.0 | 1.05 | 1.35 | 0.77 | 0.89 | 2.91 | 37235 | 4772 | 16 | 0 | 16 | 0 | 0 | logfile |
✔ | 6N3A | 9349 | 2023-08-09 | 2018-11-14 | 3.3 | 3.44 | — | 3.6 | 0.008 | 1.14 | 0.0 | 0.05 | 14.53 | 0.01 | 2.469 | 17.25 | 0.00 | 8.9 | 91.1 | 0.0 | -5.23 | 0.49 | 0.76 | 3.75 | 3.7 | 0.005 | 0.90 | 0.0 | 0.04 | 18.94 | 0.00 | 2.214 | 16.77 | 0.68 | 10.4 | 89.6 | 0.0 | -5.19 | 1.68 | 0.52 | 0.79 | 2.83 | 4310 | 600 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 6E0F | 8946 | 2023-08-13 | 2018-07-06 | 3.7 | 3.77 | — | 3.9 | 0.010 | 1.01 | 0.0 | 0.07 | 9.64 | 0.01 | 1.999 | 13.22 | 0.00 | 8.1 | 91.3 | 0.6 | -4.79 | 0.71 | 0.79 | 3.23 | 3.8 | 0.004 | 0.81 | 0.0 | 0.05 | 16.03 | 0.00 | 2.164 | 18.60 | 0.41 | 9.1 | 90.9 | 0.0 | -1.59 | 1.31 | 0.71 | 0.79 | 2.28 | 13650 | 1740 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6C9i | 7436 | 2023-08-17 | 2018-01-26 | 3.09 | 3.21 | — | 3.2 | 0.029 | 1.48 | 0.0 | 0.12 | 9.22 | 0.01 | 2.417 | 0.81 | 0.00 | 0.3 | 99.6 | 0.1 | 2.36 | 0.79 | 0.85 | 4.97 | 3.2 | 0.004 | 0.46 | 0.0 | 0.04 | 15.19 | 0.00 | 2.246 | 5.13 | 0.16 | 0.0 | 100.0 | 0.0 | 3.57 | 2.43 | 0.72 | 0.90 | 3.61 | 23700 | 3087 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CX4 | 30491 | 2023-08-10 | 2020-09-01 | 2.9 | 3.15 | — | 3.1 | 0.004 | 0.64 | 0.0 | 0.05 | 12.81 | 0.00 | 2.032 | 8.05 | 0.00 | 3.5 | 96.5 | 0.0 | -1.78 | 0.66 | 0.80 | 3.58 | 3.1 | 0.002 | 0.56 | 0.0 | 0.04 | 16.05 | 0.00 | 2.158 | 6.90 | 1.91 | 3.1 | 96.9 | 0.0 | 0.48 | 0.50 | 0.65 | 0.81 | 2.63 | 7926 | 1020 | 6 | 0 | 1 | 0 | 0 | logfile |