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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7YGD | 33816 | 2024-03-11 | 2022-07-11 | 3.41 | 4.13 | 3.42 | 3.3 | 0.002 | 0.49 | 0.0 | 0.03 | 24.63 | 0.00 | 2.100 | 14.25 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.81 | — | 3.3 | 0.007 | 0.75 | 0.0 | 0.04 | 25.30 | 0.01 | 1.824 | 32.50 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.50 | 0.91 | 0.88 | — | 8313 | 0 | 3 | 389 | 6 | 0 | 0 | logfile |
✔ | 7UJN | 26567 | 2024-03-17 | 2022-03-31 | 2.89 | 2.89 | 2.89 | 2.9 | 0.015 | 1.45 | 0.0 | 0.05 | 15.36 | 0.00 | 2.175 | 9.00 | 0.00 | 3.3 | 96.7 | 0.0 | 0.57 | 0.64 | 0.76 | 3.10 | 2.9 | 0.003 | 0.60 | 0.0 | 0.04 | 17.44 | 0.01 | 2.165 | 6.24 | 1.73 | 4.0 | 96.0 | 0.0 | -0.14 | 0.44 | 0.70 | 0.81 | 2.68 | 16272 | 1948 | 8 | 0 | 12 | 0 | 0 | logfile |
✔ | 6Vo0 | 21256 | 2024-03-18 | 2020-01-29 | 3.52 | 3.99 | — | 3.9 | 0.022 | 1.80 | 0.0 | 0.10 | 11.75 | 0.01 | 2.380 | 1.66 | 0.00 | 3.6 | 95.6 | 0.8 | 0.22 | 0.77 | 0.83 | 2.86 | 3.9 | 0.003 | 0.75 | 0.0 | 0.04 | 13.89 | 0.00 | 2.163 | 11.00 | 1.95 | 6.1 | 93.1 | 0.7 | -0.57 | 1.97 | 0.75 | 0.81 | 1.93 | 19494 | 2364 | 36 | 0 | 72 | 0 | 0 | logfile |
✔ | 6L7o | 0849 | 2024-03-23 | 2019-11-02 | 3.2 | 3.37 | — | 3.5 | 0.008 | 1.35 | 0.0 | 2.04 | 50.05 | 0.01 | 1.354 | 12.19 | 0.00 | 5.3 | 94.7 | 0.0 | -2.60 | 0.57 | 0.70 | 0.86 | 3.4 | 0.008 | 3.32 | 0.0 | 0.43 | 37.30 | 0.00 | 2.167 | 7.56 | 2.50 | 5.9 | 94.1 | 0.0 | 0.49 | 0.76 | 0.62 | 0.81 | 1.54 | 35037 | 4120 | 34 | 0 | 83 | 0 | 0 | logfile |
✔ | 8EXR | 28660 | 2024-03-10 | 2022-10-25 | 3.8 | 4.08 | 3.96 | 4.1 | 0.026 | 1.94 | 0.0 | 0.11 | 12.16 | 0.01 | 2.016 | 3.98 | 0.00 | 2.8 | 96.9 | 0.3 | -0.66 | 0.58 | 0.68 | 1.29 | 4.1 | 0.003 | 0.70 | 0.0 | 0.04 | 16.49 | 0.01 | 2.172 | 13.83 | 2.48 | 3.3 | 96.7 | 0.0 | -0.69 | 1.25 | 0.54 | 0.67 | 0.04 | 5111 | 590 | 5 | 0 | 7 | 0 | 0 | logfile |
✔ | 8FBL | 28964 | 2024-03-11 | 2022-11-29 | 2.7 | 2.82 | 2.73 | 3.0 | 0.006 | 0.74 | 0.0 | 0.05 | 16.51 | 0.02 | 2.233 | 7.63 | 0.00 | 1.1 | 98.9 | 0.0 | 1.11 | 0.44 | 0.71 | 4.04 | 2.9 | 0.003 | 0.57 | 0.0 | 0.05 | 15.27 | 0.00 | 2.192 | 7.11 | 2.47 | 2.2 | 97.8 | 0.0 | 1.06 | 1.26 | 0.68 | 0.87 | 4.33 | 6822 | 834 | 6 | 0 | 15 | 0 | 0 | logfile |
✔ | 7PZP | 13735 | 2024-03-21 | 2021-10-13 | 3.5 | 3.29 | — | 3.2 | 0.007 | 1.02 | 0.0 | 0.07 | 14.30 | 0.01 | 2.128 | 6.10 | 0.00 | 2.0 | 98.0 | 0.0 | 2.29 | 0.72 | 0.67 | 1.53 | 3.2 | 0.003 | 0.64 | 0.0 | 0.04 | 16.19 | 0.00 | 2.065 | 11.81 | 1.20 | 2.2 | 97.8 | 0.0 | 2.30 | 2.69 | 0.75 | 0.72 | 2.01 | 15602 | 1978 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6CNM | 7537 | 2024-03-15 | 2018-03-08 | 3.4 | 3.51 | — | 3.5 | 0.010 | 1.11 | 0.0 | 0.06 | 14.65 | 0.01 | 2.331 | 1.47 | 0.00 | 4.3 | 95.7 | 0.0 | -4.29 | 0.64 | 0.84 | 3.41 | 3.4 | 0.003 | 0.53 | 0.0 | 0.04 | 13.64 | 0.00 | 2.201 | 3.51 | 3.20 | 3.3 | 96.7 | 0.0 | 1.90 | 0.55 | 0.64 | 0.85 | 2.18 | 12541 | 1700 | 12 | 0 | 17 | 0 | 0 | logfile |
✔ | 8HBV | 34644 | 2024-03-10 | 2022-10-31 | 2.51 | 2.70 | 2.51 | 2.7 | 0.009 | 0.96 | 0.0 | 0.05 | 15.84 | 0.01 | 2.209 | 8.10 | 0.00 | 2.0 | 98.0 | 0.0 | 1.54 | 0.61 | 0.88 | 4.41 | 2.7 | 0.003 | 0.53 | 0.0 | 0.04 | 17.02 | 0.00 | 2.204 | 7.03 | 1.78 | 2.2 | 97.8 | 0.0 | 2.61 | 0.92 | 0.61 | 0.89 | 3.96 | 3279 | 414 | 3 | 0 | 3 | 0 | 0 | logfile |
✔ | 7VAP | 31857 | 2024-03-21 | 2021-08-30 | 3.0 | 2.45 | 2.98 | 2.9 | 0.004 | 0.54 | 0.0 | 0.04 | 13.61 | 0.00 | 1.645 | 3.89 | 0.00 | 2.0 | 98.0 | 0.0 | 1.43 | 0.54 | 0.79 | 3.19 | 2.9 | 0.003 | 0.58 | 0.0 | 0.04 | 16.87 | 0.00 | 1.920 | 5.64 | 2.21 | 2.2 | 97.8 | 0.0 | 0.59 | 0.57 | 0.63 | 0.85 | 2.90 | 29558 | 3788 | 15 | 0 | 6 | 0 | 0 | logfile |
✔ | 6R8F | 4759 | 2024-03-16 | 2019-04-01 | 3.8 | 3.84 | 3.74 | 3.8 | 0.013 | 1.15 | 0.0 | 0.07 | 10.25 | 0.01 | 2.059 | 3.60 | 0.00 | 11.0 | 89.0 | 0.0 | -5.94 | 0.78 | 0.80 | 3.13 | 3.8 | 0.003 | 0.65 | 0.0 | 0.04 | 14.99 | 0.00 | 2.023 | 8.49 | 2.54 | 6.1 | 93.9 | 0.0 | -0.89 | 1.36 | 0.79 | 0.80 | 2.02 | 15810 | 2000 | 10 | 0 | 166 | 0 | 0 | logfile |
✔ | 7ooB | 13009 | 2024-03-19 | 2021-05-27 | 2.7 | 2.65 | 2.56 | 2.6 | 0.005 | 0.75 | 0.0 | 0.05 | 15.48 | 0.00 | 1.918 | 4.21 | 0.00 | 4.0 | 96.0 | 0.0 | -1.31 | 0.78 | 0.81 | 3.80 | 2.6 | 0.003 | 0.57 | 0.0 | 0.04 | 17.47 | 0.00 | 1.814 | 7.85 | 1.04 | 3.8 | 96.2 | 0.0 | -0.08 | 1.24 | 0.78 | 0.84 | 3.57 | 90745 | 5550 | 25 | 92 | 12 | 0 | 44484 | logfile |
✔ | 7VCT | 31895 | 2024-03-23 | 2021-09-04 | 3.21 | 3.41 | — | 3.4 | 0.007 | 0.94 | 0.0 | 0.05 | 9.93 | 0.01 | 2.132 | 3.51 | 0.00 | 4.4 | 95.6 | 0.0 | -3.08 | 0.77 | 0.82 | 2.62 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 13.38 | 0.00 | 2.001 | 6.86 | 1.25 | 3.9 | 96.1 | 0.0 | 0.54 | 1.30 | 0.76 | 0.84 | 2.00 | 35694 | 4506 | 12 | 0 | 18 | 0 | 0 | logfile |
✔ | 7TCG | 25811 | 2024-03-11 | 2021-12-23 | 3.8 | 3.89 | 3.84 | 3.9 | 0.004 | 1.15 | 0.0 | 0.04 | 15.91 | 0.00 | 2.138 | 5.54 | 0.00 | 7.9 | 92.1 | 0.0 | -0.53 | 0.67 | 0.81 | 1.03 | 3.8 | 0.003 | 0.66 | 0.0 | 0.04 | 16.97 | 0.00 | 2.131 | 6.60 | 1.34 | 7.4 | 92.6 | 0.0 | -0.31 | 0.93 | 0.68 | 0.82 | 1.00 | 8891 | 1123 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 6T72 | 10389 | 2024-03-20 | 2019-10-21 | 3.7 | 3.79 | — | 3.8 | 0.008 | 1.55 | 0.0 | 0.11 | 21.39 | 0.02 | 2.167 | 4.27 | 0.00 | 2.1 | 97.9 | 0.0 | -2.53 | 0.76 | 0.87 | 2.40 | 3.7 | 0.004 | 0.91 | 3.0 | 0.04 | 14.01 | 0.00 | 2.091 | 3.75 | 3.32 | 2.6 | 97.4 | 0.0 | 1.19 | 1.23 | 0.78 | 0.88 | 1.92 | 26278 | 3388 | 42 | 0 | 210 | 0 | 0 | logfile |
✔ | 7VHM | 31999 | 2024-03-19 | 2021-09-22 | 3.2 | 3.32 | — | 3.3 | 0.004 | 0.66 | 0.0 | 0.05 | 14.39 | 0.01 | 2.124 | 10.68 | 0.00 | 6.6 | 93.4 | 0.0 | -2.95 | 0.73 | 0.80 | 2.94 | 3.3 | 0.004 | 0.60 | 0.0 | 0.04 | 15.52 | 0.00 | 2.163 | 9.61 | 1.74 | 7.0 | 93.0 | 0.0 | -1.89 | 0.29 | 0.74 | 0.85 | 2.82 | 24972 | 3237 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VCV | 31897 | 2024-03-23 | 2021-09-04 | 3.21 | 3.32 | — | 3.2 | 0.012 | 1.08 | 0.0 | 0.06 | 10.31 | 0.01 | 2.097 | 3.88 | 0.00 | 6.2 | 93.8 | 0.0 | -3.61 | 0.75 | 0.81 | 2.50 | 3.3 | 0.003 | 0.55 | 0.0 | 0.04 | 14.04 | 0.00 | 2.021 | 5.30 | 1.32 | 4.9 | 95.1 | 0.0 | 0.27 | 1.24 | 0.75 | 0.83 | 1.76 | 36036 | 4548 | 12 | 0 | 24 | 0 | 0 | logfile |
✔ | 8E28 | 27828 | 2024-03-10 | 2022-08-14 | 3.1 | 3.26 | 3.15 | 3.2 | 0.004 | 0.83 | 0.0 | 0.05 | 17.29 | 0.01 | 2.316 | 3.83 | 0.00 | 1.5 | 98.5 | 0.0 | -1.72 | 0.75 | 0.85 | 3.17 | 3.2 | 0.002 | 0.47 | 0.0 | 0.04 | 17.85 | 0.00 | 2.221 | 4.97 | 1.98 | 1.5 | 98.5 | 0.0 | 0.22 | 0.71 | 0.76 | 0.87 | 2.93 | 5789 | 690 | 2 | 15 | 0 | 0 | 0 | logfile |
✔ | 7PHi | 13417 | 2024-03-15 | 2021-08-17 | 3.1 | 3.40 | 3.10 | 3.4 | 0.009 | 0.75 | 0.0 | 0.05 | 14.16 | 0.01 | 2.265 | 7.75 | 0.00 | 3.4 | 96.6 | 0.0 | -1.29 | 0.47 | 0.68 | 3.70 | 3.4 | 0.003 | 0.52 | 0.0 | 0.04 | 15.49 | 0.00 | 2.233 | 8.07 | 1.11 | 3.2 | 96.8 | 0.0 | 1.38 | 0.48 | 0.66 | 0.80 | 3.30 | 12708 | 1572 | 8 | 0 | 16 | 0 | 0 | logfile |
✔ | 7NYW | 12656 | 2024-03-25 | 2021-03-23 | 3.1 | 3.76 | 3.13 | 3.2 | 0.003 | 0.50 | 0.0 | 0.04 | 18.24 | 0.00 | 1.891 | 6.09 | 0.00 | 3.7 | 96.3 | 0.0 | 1.43 | 0.83 | 0.79 | 1.86 | 3.2 | 0.004 | 0.52 | 0.0 | 0.04 | 18.68 | 0.00 | 1.792 | 7.10 | 0.91 | 4.2 | 95.8 | 0.0 | 1.75 | 0.46 | 0.84 | 0.83 | 1.81 | 48568 | 2795 | 18 | 104 | 6 | 0 | 23780 | logfile |