Table showing results for April 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	7V83	31788	2022-04-09	2021-08-22	2.8	3.28	—	3.2	0.005	0.58	0.0	0.04	14.22	0.00	2.147	9.98	0.00	5.7	94.3	0.0	-0.33	0.76	0.79	1.90	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	40162	4902	40	0	89	0	0	logfile
✘	7V26	31637	2022-04-08	2021-08-07	3.85	3.78	—	3.8	0.002	0.50	0.0	0.04	10.81	0.00	2.234	7.30	0.16	5.3	94.7	0.0	-3.84	0.87	0.77	1.15	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	35157	4506	12	0	45	0	0	logfile
✘	7PE7	13347	2022-04-04	2021-08-09	3.41	3.76	—	3.7	0.002	0.46	0.0	0.04	9.05	0.00	2.205	4.31	0.98	3.3	96.6	0.1	-0.02	0.78	0.80	1.71	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	58582	7664	16	0	6	0	0	logfile
✘	7VQ5	32086	2022-04-04	2021-10-19	3.1	3.31	—	3.3	0.009	0.77	0.0	0.05	14.72	0.00	2.110	7.38	0.14	7.4	92.6	0.0	-3.56	0.66	0.84	2.48	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6315	800	2	0	1	0	0	logfile
✘	7NV0	12601	2022-04-05	2021-03-15	3.4	2.96	—	2.9	0.011	1.13	0.0	0.06	19.63	0.01	2.205	8.09	1.30	8.1	91.9	0.0	-4.56	0.60	0.68	2.36	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9928	1180	7	53	1	0	0	logfile
✘	7P06	13145	2022-04-06	2021-06-29	3.77	4.42	—	4.0	0.005	0.71	0.0	0.04	13.79	0.01	1.299	9.06	0.00	5.5	94.5	0.0	-0.50	0.71	0.77	2.52	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	21476	1350	1	0	3	0	10638	logfile
✘	7oY8	13110	2022-04-06	2021-06-23	2.5	2.51	—	2.6	0.008	0.91	0.0	0.05	15.06	0.01	1.197	0.65	0.21	2.4	97.6	0.0	0.49	0.72	0.78	2.62	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	22902	2293	103	0	68	372	0	logfile
✘	7P1H	13159	2022-04-05	2021-07-01	3.9	4.12	—	3.9	0.005	1.01	0.0	0.05	14.14	0.01	2.016	12.38	0.00	5.7	94.3	0.0	-1.60	0.81	0.60	0.33	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13957	898	4	0	2	0	6917	logfile
✘	7FiJ	31599	2022-04-04	2021-07-31	3.8	2.32	—	1.8	0.001	0.41	0.0	0.04	8.02	0.00	2.344	3.95	0.00	4.1	95.9	0.0	1.10	0.58	0.50	3.05	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	3061	561	1	0	0	0	0	logfile
✘	7SoE	25268	2022-04-07	2021-10-29	2.8	2.87	2.84	2.8	0.010	1.27	0.0	0.07	9.85	0.01	2.416	1.06	0.15	2.0	98.0	0.0	0.29	0.74	0.80	3.95	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	25947	3783	15	0	57	0	0	logfile
✘	7NKZ	12451	2022-04-04	2021-02-19	2.5	2.68	2.48	2.6	0.006	0.73	1.0	0.04	13.30	0.00	1.216	11.51	0.63	1.1	98.9	0.0	0.48	0.70	0.88	4.03	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6424	792	4	0	5	42	0	logfile
✘	7BKD	12210	2022-04-07	2021-01-15	3.0	2.42	—	2.5	0.006	0.83	6.0	0.06	14.30	0.01	2.118	9.40	1.26	5.5	94.5	0.1	-0.29	0.60	0.80	3.82	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	24799	3177	18	0	26	0	0	logfile
✘	7EW0	31343	2022-04-05	2021-05-24	3.42	4.10	—	4.1	0.003	0.61	0.0	0.04	14.16	0.00	2.087	6.80	0.71	2.9	97.1	0.0	-1.47	0.59	0.76	1.95	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8987	1142	6	0	1	0	0	logfile
✘	7E1X	30945	2022-04-09	2021-02-03	2.93	3.36	—	3.3	0.013	1.46	3.0	0.06	17.99	0.02	1.182	9.31	6.11	7.9	91.6	0.5	-2.24	0.62	0.80	2.40	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	42679	5132	34	0	59	0	0	logfile
✘	7FBS	31519	2022-04-04	2021-07-12	3.4	3.24	—	3.2	0.021	1.19	0.0	0.09	18.03	0.01	1.222	18.70	3.06	7.4	92.5	0.1	-3.42	0.59	0.78	2.22	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9274	1118	1	0	17	0	0	logfile
✘	7o37	12702	2022-04-09	2021-04-01	3.2	3.13	—	3.1	0.006	1.01	0.0	0.06	15.01	0.01	1.201	5.27	0.04	3.7	96.3	0.0	-1.41	0.90	0.87	2.73	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	48610	5970	52	0	43	0	0	logfile
✘	7BKE	12212	2022-04-07	2021-01-15	2.8	2.45	—	2.5	0.010	1.01	18.0	0.08	14.85	0.01	2.115	7.88	2.43	5.4	94.6	0.1	-0.80	0.60	0.81	4.01	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	24816	3176	18	0	26	0	0	logfile
✘	7o3E	12705	2022-04-09	2021-04-01	3.6	3.24	—	3.4	0.006	1.04	1.0	0.06	15.09	0.01	1.201	4.95	0.00	4.7	95.3	0.0	-1.64	0.88	0.84	2.32	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	44039	5417	45	0	34	0	0	logfile
✘	7S8N	24898	2022-04-04	2021-09-18	2.9	2.20	2.92	2.1	0.013	0.95	0.0	0.06	13.12	0.01	2.202	4.10	0.00	5.1	94.9	0.0	-0.33	0.79	0.80	3.96	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8154	1090	6	0	1	0	0	logfile
✘	7PD3	13329	2022-04-04	2021-08-04	3.4	2.98	3.16	3.0	0.009	1.07	2.0	0.07	16.15	0.01	1.125	5.12	0.01	5.6	94.2	0.2	-3.47	0.64	0.66	1.34	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	108076	9276	76	1522	125	0	0	logfile

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