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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6JQo | 9876 | 2023-02-27 | 2019-03-31 | 3.1 | 3.28 | — | 3.3 | 0.025 | 1.01 | 0.0 | 0.26 | 11.11 | 0.01 | 2.337 | 3.22 | 0.13 | 5.3 | 94.7 | 0.0 | -3.99 | 0.79 | 0.87 | 4.25 | 3.3 | 0.005 | 0.85 | 0.0 | 0.05 | 13.81 | 0.01 | 1.981 | 8.05 | 0.03 | 5.5 | 94.5 | 0.0 | -3.52 | 1.19 | 0.77 | 0.88 | 4.08 | 31254 | 4068 | 12 | 0 | 12 | 0 | 0 | logfile |
✔ | 6JQN | 9875 | 2023-02-27 | 2019-03-31 | 3.1 | 3.22 | — | 3.2 | 0.010 | 1.01 | 0.0 | 0.06 | 11.56 | 0.01 | 2.274 | 5.69 | 0.00 | 6.0 | 94.0 | 0.0 | -4.15 | 0.77 | 0.84 | 3.79 | 3.2 | 0.003 | 0.61 | 0.0 | 0.04 | 15.10 | 0.00 | 2.051 | 11.42 | 0.16 | 4.4 | 95.6 | 0.0 | -1.13 | 0.69 | 0.79 | 0.87 | 2.75 | 31278 | 4068 | 12 | 0 | 12 | 0 | 0 | logfile |
✔ | 6JQM | 9874 | 2023-02-27 | 2019-03-31 | 3.3 | 3.54 | — | 3.5 | 0.005 | 0.83 | 0.0 | 0.05 | 10.76 | 0.01 | 2.304 | 5.76 | 0.06 | 5.8 | 94.2 | 0.0 | -4.47 | 0.76 | 0.84 | 3.78 | 3.5 | 0.003 | 0.61 | 0.0 | 0.04 | 14.51 | 0.00 | 2.188 | 10.13 | 0.09 | 4.7 | 95.3 | 0.0 | -1.23 | 2.69 | 0.78 | 0.87 | 2.95 | 30936 | 4068 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 6JQL | 9873 | 2023-02-27 | 2019-03-31 | 2.9 | 3.07 | — | 3.1 | 0.004 | 0.81 | 0.0 | 0.05 | 10.10 | 0.01 | 2.305 | 6.74 | 0.16 | 4.8 | 95.2 | 0.0 | -4.01 | 0.77 | 0.84 | 3.95 | 3.0 | 0.006 | 0.74 | 0.0 | 0.05 | 15.70 | 0.00 | 2.135 | 10.82 | 1.73 | 4.0 | 96.0 | 0.0 | -0.80 | 1.68 | 0.77 | 0.87 | 3.34 | 30648 | 4068 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6JQ0 | 9872 | 2023-02-26 | 2019-03-28 | 3.54 | 4.12 | — | 4.0 | 0.007 | 1.21 | 0.0 | 0.06 | 16.27 | 0.01 | 2.235 | 4.90 | 0.63 | 13.0 | 86.5 | 0.5 | -5.59 | 0.69 | 0.85 | 1.20 | 4.0 | 0.005 | 0.87 | 0.0 | 0.05 | 17.37 | 0.01 | 2.042 | 11.00 | 0.70 | 13.4 | 86.3 | 0.3 | -2.28 | 0.53 | 0.65 | 0.82 | 1.11 | 26917 | 3323 | 13 | 0 | 20 | 0 | 0 | logfile |
✔ | 6JPU | 9871 | 2023-02-27 | 2019-03-28 | 4.27 | 5.69 | — | 6.0 | 0.007 | 1.03 | 0.0 | 0.06 | 17.27 | 0.01 | 1.984 | 70.08 | 9.58 | 9.8 | 90.1 | 0.2 | -3.97 | 0.80 | 0.76 | — | 5.2 | 0.003 | 0.64 | 0.0 | 0.04 | 13.45 | 0.00 | 1.873 | 91.46 | 0.00 | 9.2 | 90.8 | 0.0 | -1.29 | 1.07 | 0.79 | 0.78 | — | 30378 | 3462 | 6 | 0 | 0 | 0 | 2610 | logfile |
✔ | 6JPQ | 9870 | 2023-02-26 | 2019-03-27 | 4.44 | 5.93 | — | 7.2 | 0.006 | 1.13 | 0.0 | 0.06 | 12.18 | 0.01 | 2.195 | 10.45 | 0.57 | 9.1 | 90.9 | 0.0 | -5.01 | 0.81 | 0.77 | — | 6.0 | 0.003 | 0.82 | 0.0 | 0.05 | 12.81 | 0.01 | 2.088 | 22.73 | 0.00 | 8.6 | 91.4 | 0.0 | -2.15 | 1.79 | 0.82 | 0.80 | — | 27768 | 3462 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 6JPB | 9869 | 2023-02-24 | 2019-03-26 | 2.9 | 3.09 | — | 3.1 | 0.015 | 1.47 | 3.0 | 0.12 | 14.12 | 0.01 | 1.739 | 21.16 | 4.38 | 8.5 | 91.1 | 0.4 | -4.25 | 0.61 | 0.77 | 2.33 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21989 | 2694 | 14 | 0 | 35 | 0 | 0 | logfile |
✘ | 6JPA | 9868 | 2023-02-24 | 2019-03-26 | 2.6 | 2.76 | — | 2.8 | 0.013 | 1.50 | 3.0 | 0.12 | 17.43 | 0.01 | 1.921 | 38.35 | 11.40 | 8.8 | 89.5 | 1.7 | -3.83 | 0.54 | 0.61 | 1.56 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22232 | 2694 | 14 | 0 | 42 | 0 | 0 | logfile |
✘ | 6JP8 | 9867 | 2023-02-24 | 2019-03-26 | 2.7 | 2.51 | — | 2.6 | 0.013 | 1.46 | 8.0 | 0.12 | 14.43 | 0.01 | 1.877 | 25.96 | 6.07 | 7.2 | 92.3 | 0.5 | -4.05 | 0.38 | 0.52 | 1.99 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21801 | 2694 | 14 | 0 | 29 | 0 | 0 | logfile |
✘ | 6JP5 | 9866 | 2023-02-24 | 2019-03-25 | 2.9 | 3.03 | — | 3.1 | 0.016 | 1.53 | 4.0 | 0.12 | 14.51 | 0.01 | 1.921 | 28.81 | 6.11 | 7.7 | 91.7 | 0.6 | -3.65 | 0.56 | 0.62 | 2.05 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22068 | 2694 | 14 | 0 | 39 | 0 | 0 | logfile |
✔ | 6JNF | 9851 | 2023-02-18 | 2019-03-14 | 3.81 | 3.96 | 3.73 | 4.0 | 0.009 | 1.23 | 0.0 | 0.06 | 17.14 | 0.01 | 2.304 | 5.10 | 1.02 | 16.7 | 83.3 | 0.0 | -6.16 | 0.64 | 0.82 | 1.38 | 4.0 | 0.003 | 0.91 | 0.0 | 0.05 | 17.91 | 0.00 | 2.133 | 11.10 | 0.64 | 10.5 | 89.5 | 0.0 | -2.83 | 1.47 | 0.67 | 0.82 | 1.30 | 7271 | 924 | 11 | 0 | 1 | 0 | 0 | logfile |
✔ | 6JMR | 9850 | 2023-02-19 | 2019-03-13 | 4.1 | 4.26 | 4.05 | 4.1 | 0.006 | 1.05 | 0.0 | 0.06 | 14.01 | 0.01 | 2.239 | 7.77 | 0.56 | 7.1 | 92.8 | 0.1 | -4.07 | 0.83 | 0.78 | — | 4.1 | 0.005 | 0.75 | 0.0 | 0.05 | 13.32 | 0.01 | 2.065 | 16.68 | 0.00 | 7.5 | 92.5 | 0.0 | -2.07 | 0.78 | 0.84 | 0.79 | — | 9809 | 1223 | 7 | 0 | 69 | 0 | 0 | logfile |
✔ | 6JMQ | 9849 | 2023-02-19 | 2019-03-13 | 3.31 | 3.52 | 3.25 | 3.5 | 0.005 | 0.95 | 0.0 | 0.05 | 14.01 | 0.01 | 2.293 | 3.84 | 0.29 | 4.3 | 95.6 | 0.1 | -5.09 | 0.71 | 0.79 | 2.84 | 3.5 | 0.004 | 0.71 | 0.0 | 0.04 | 15.56 | 0.00 | 2.049 | 8.75 | 0.29 | 4.5 | 95.5 | 0.0 | -1.48 | 1.46 | 0.74 | 0.83 | 2.73 | 9950 | 1223 | 7 | 0 | 74 | 0 | 0 | logfile |
✔ | 6Ji1 | 9832 | 2023-02-21 | 2019-02-19 | 4.1 | 4.20 | — | 4.1 | 0.010 | 1.26 | 0.0 | 0.06 | 11.77 | 0.01 | 2.250 | 7.50 | 0.57 | 11.2 | 83.5 | 5.3 | -4.78 | 0.61 | 0.71 | — | 4.1 | 0.004 | 0.82 | 0.0 | 0.04 | 12.95 | 0.01 | 2.136 | 13.76 | 0.00 | 9.5 | 89.9 | 0.7 | -1.24 | 0.85 | 0.58 | 0.72 | — | 13992 | 1848 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6JD1 | 9801 | 2023-02-24 | 2019-01-30 | 3.38 | 4.55 | — | 3.9 | 0.013 | 1.00 | 0.0 | 0.05 | 14.90 | 0.00 | 2.005 | 6.39 | 0.00 | 7.3 | 92.7 | 0.0 | -4.95 | 0.85 | 0.70 | 1.18 | 4.0 | 0.005 | 0.66 | 0.0 | 0.04 | 15.75 | 0.00 | 1.770 | 17.72 | 0.50 | 8.6 | 91.4 | 0.0 | -2.50 | 1.31 | 0.88 | 0.85 | 1.75 | 63427 | 3953 | 36 | 0 | 60 | 192 | 31469 | logfile |
✔ | 6JCZ | 9800 | 2023-02-24 | 2019-01-30 | 3.35 | 4.22 | — | 3.7 | 0.006 | 0.81 | 0.0 | 0.04 | 15.49 | 0.00 | 1.670 | 3.80 | 0.00 | 6.8 | 93.2 | 0.0 | -5.41 | 0.85 | 0.74 | 2.43 | 3.8 | 0.005 | 0.68 | 0.0 | 0.04 | 16.54 | 0.00 | 1.764 | 10.95 | 0.06 | 6.9 | 93.1 | 0.0 | -2.78 | 2.63 | 0.87 | 0.85 | 2.58 | 63476 | 3959 | 36 | 0 | 48 | 99 | 31525 | logfile |
✔ | 6JCW | 9799 | 2023-02-27 | 2019-01-30 | 3.04 | 3.78 | — | 3.4 | 0.007 | 0.88 | 0.0 | 0.05 | 15.38 | 0.01 | 2.168 | 1.88 | 0.35 | 6.1 | 93.9 | 0.0 | -6.55 | 0.88 | 0.88 | 4.46 | 3.5 | 0.004 | 0.68 | 0.0 | 0.04 | 16.33 | 0.00 | 2.162 | 4.95 | 0.03 | 3.5 | 96.5 | 0.0 | -0.07 | 1.31 | 0.86 | 0.89 | 3.75 | 30888 | 3912 | 36 | 0 | 24 | 100 | 0 | logfile |
✘ | 6JCV | 9798 | 2023-02-27 | 2019-01-30 | 2.92 | 4.05 | — | 3.7 | 0.007 | 0.90 | 0.0 | 0.06 | 13.94 | 0.01 | 2.341 | 4.98 | 0.00 | 5.2 | 94.8 | 0.0 | -5.68 | 0.87 | 0.86 | 3.38 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30876 | 3912 | 31 | 0 | 24 | 96 | 0 | logfile |
✔ | 6JC3 | 9793 | 2023-02-17 | 2019-01-28 | 4.8 | 4.87 | — | 4.8 | 0.010 | 1.35 | 2.0 | 0.07 | 15.57 | 0.01 | 1.512 | 30.30 | 3.10 | 10.1 | 89.1 | 0.8 | -4.39 | 0.42 | 0.78 | — | 4.7 | 0.004 | 0.77 | 0.0 | 0.04 | 13.92 | 0.00 | 2.100 | 14.75 | 0.00 | 6.5 | 93.5 | 0.0 | 0.86 | 4.22 | 0.43 | 0.81 | — | 3154 | 391 | 2 | 6 | 0 | 0 | 0 | logfile |