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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8DVD | 27735 | 2023-02-23 | 2022-07-28 | 4.12 | 4.71 | 4.34 | 4.3 | 0.004 | 0.56 | 0.0 | 0.05 | 13.05 | 0.00 | 1.932 | 5.05 | 0.69 | 8.0 | 91.9 | 0.1 | -0.76 | 0.79 | 0.74 | — | 4.3 | 0.004 | 0.72 | 0.0 | 0.05 | 12.95 | 0.00 | 2.086 | 12.07 | 0.00 | 8.1 | 91.8 | 0.1 | -1.20 | 1.74 | 0.84 | 0.80 | — | 20804 | 2137 | 83 | 0 | 302 | 0 | 0 | logfile |
✔ | 7JSV | 22460 | 2023-02-24 | 2020-08-16 | 3.9 | 3.98 | — | 4.0 | 0.020 | 2.10 | 0.0 | 0.10 | 13.46 | 0.01 | 2.348 | 6.75 | 0.00 | 0.0 | 100.0 | 0.0 | 1.16 | 0.61 | 0.80 | 2.43 | 4.0 | 0.003 | 0.79 | 0.0 | 0.04 | 16.05 | 0.00 | 2.148 | 12.36 | 0.19 | 1.0 | 99.0 | 0.0 | -0.77 | 0.91 | 0.64 | 0.83 | 2.60 | 22140 | 2706 | 82 | 0 | 41 | 0 | 0 | logfile |
✘ | 7F4V | 31455 | 2023-02-26 | 2021-06-21 | 2.04 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 67641 | 6336 | 78 | 0 | 453 | 402 | 0 | logfile |
✘ | 6YP7 | 10865 | 2023-02-28 | 2020-04-15 | 3.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 71784 | 7002 | 77 | 0 | 325 | 0 | 0 | logfile |
✔ | 7VRJ | 32100 | 2023-02-25 | 2021-10-23 | 2.81 | 2.48 | — | 2.7 | 0.020 | 1.87 | 0.0 | 0.06 | 18.07 | 0.02 | 2.064 | 9.39 | 1.43 | 2.9 | 97.1 | 0.0 | 1.42 | 0.68 | 0.84 | 3.65 | 2.7 | 0.004 | 0.76 | 0.0 | 0.04 | 18.57 | 0.00 | 1.926 | 6.96 | 3.18 | 2.6 | 97.4 | 0.0 | 1.32 | 0.33 | 0.68 | 0.87 | 3.05 | 26309 | 2604 | 77 | 0 | 114 | 48 | 0 | logfile |
✔ | 6TH3 | 10502 | 2023-02-23 | 2019-11-18 | 4.0 | 4.17 | 4.09 | 4.0 | 0.007 | 1.10 | 0.0 | 0.05 | 10.47 | 0.01 | 2.268 | 4.52 | 0.00 | 16.5 | 83.5 | 0.0 | -5.42 | 0.64 | 0.56 | — | 4.0 | 0.004 | 0.85 | 0.0 | 0.05 | 15.42 | 0.01 | 2.181 | 11.71 | 0.66 | 13.5 | 86.5 | 0.0 | -1.92 | 1.67 | 0.74 | 0.78 | — | 60600 | 7800 | 75 | 0 | 0 | 0 | 0 | logfile |
✘ | 7PNK | 13548 | 2023-02-23 | 2021-09-07 | 3.61 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 60673 | 6142 | 74 | 0 | 250 | 0 | 0 | logfile |
✔ | 7X9W | 33084 | 2023-02-23 | 2022-03-16 | 2.78 | 2.90 | 2.88 | 2.9 | 0.008 | 0.84 | 12.0 | 0.06 | 15.86 | 0.01 | 2.241 | 6.77 | 6.86 | 3.8 | 96.2 | 0.0 | -2.46 | 0.78 | 0.83 | 3.91 | 2.9 | 0.004 | 0.64 | 0.0 | 0.05 | 17.40 | 0.00 | 2.071 | 7.91 | 3.56 | 2.1 | 97.9 | 0.0 | -0.73 | 0.46 | 0.77 | 0.84 | 4.17 | 59640 | 7368 | 72 | 0 | 24 | 48 | 0 | logfile |
✔ | 6M3X | 30073 | 2023-02-23 | 2020-03-04 | 2.24 | 2.31 | — | 2.3 | 0.006 | 0.81 | 0.0 | 0.05 | 13.95 | 0.01 | 2.222 | 3.45 | 0.37 | 3.2 | 96.8 | 0.0 | -2.65 | 0.78 | 0.90 | 7.35 | 2.3 | 0.003 | 0.61 | 0.0 | 0.05 | 16.91 | 0.00 | 2.259 | 5.96 | 0.73 | 2.9 | 97.1 | 0.0 | 0.36 | 0.42 | 0.78 | 0.91 | 6.73 | 62387 | 7440 | 72 | 0 | 24 | 2243 | 0 | logfile |
✘ | 6Z5R | 11080 | 2023-02-25 | 2020-05-27 | 2.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25048 | 2336 | 72 | 0 | 105 | 3 | 0 | logfile |
✔ | 7LQE | 23483 | 2023-02-17 | 2021-02-13 | 3.4 | 3.06 | — | 3.4 | 0.016 | 1.42 | 0.0 | 0.04 | 20.72 | 0.00 | 2.423 | 23.27 | 14.58 | 0.0 | 100.0 | 0.0 | -5.94 | 0.57 | 0.80 | 5.06 | 3.2 | 0.151 | 5.20 | 240.0 | 0.38 | 25.46 | 0.02 | 1.745 | 134.94 | 4.40 | 60.8 | 38.2 | 1.0 | -8.67 | 1.67 | 0.65 | 0.89 | 2.25 | 6048 | 576 | 72 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UDJ | 20739 | 2023-02-25 | 2019-09-19 | 2.5 | 2.60 | 2.46 | 2.6 | 0.010 | 1.02 | 0.0 | 0.06 | 13.38 | 0.01 | 2.252 | 3.09 | 0.41 | 4.1 | 95.8 | 0.1 | -1.93 | 0.71 | 0.85 | 4.78 | 2.6 | 0.004 | 0.64 | 0.0 | 0.04 | 15.38 | 0.00 | 2.003 | 6.52 | 2.40 | 3.4 | 96.6 | 0.0 | -0.05 | 0.43 | 0.71 | 0.86 | 4.44 | 26592 | 3090 | 72 | 0 | 177 | 45 | 0 | logfile |
✔ | 7C9R | 30314 | 2023-02-27 | 2020-06-07 | 2.82 | 2.97 | — | 3.0 | 0.021 | 3.34 | 29.0 | 0.13 | 21.92 | 0.02 | 1.938 | 7.80 | 0.43 | 3.9 | 96.0 | 0.1 | -0.57 | 0.76 | 0.94 | 4.41 | 3.0 | 0.004 | 1.54 | 0.0 | 0.04 | 20.44 | 0.00 | 1.981 | 5.50 | 1.05 | 2.5 | 97.5 | 0.0 | 2.12 | 0.94 | 0.72 | 0.91 | 3.18 | 29228 | 3009 | 72 | 0 | 124 | 0 | 0 | logfile |
✘ | 6KMX | 0727 | 2023-02-24 | 2019-08-01 | 2.41 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 65112 | 5919 | 72 | 0 | 363 | 636 | 0 | logfile |
✔ | 7N65 | 24195 | 2023-02-23 | 2021-06-07 | 4.15 | 4.35 | — | 4.2 | 0.011 | 1.18 | 0.0 | 0.06 | 14.11 | 0.01 | 1.935 | 35.99 | 4.29 | 15.2 | 84.6 | 0.2 | -4.44 | 0.78 | 0.77 | — | 4.2 | 0.005 | 0.85 | 0.0 | 0.05 | 12.89 | 0.00 | 2.103 | 22.87 | 0.05 | 12.1 | 87.9 | 0.0 | -3.06 | 0.72 | 0.77 | 0.76 | — | 21525 | 2454 | 72 | 0 | 189 | 0 | 0 | logfile |
✘ | 6L4U | 0835 | 2023-02-23 | 2019-10-21 | 2.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 62199 | 5075 | 72 | 0 | 557 | 156 | 0 | logfile |
✔ | 6MPH | 9189 | 2023-02-28 | 2018-10-06 | 3.8 | 4.28 | — | 3.9 | 0.006 | 0.79 | 0.0 | 0.05 | 12.56 | 0.01 | 2.286 | 6.11 | 6.01 | 5.3 | 94.6 | 0.2 | -3.46 | 0.84 | 0.85 | 2.34 | 3.9 | 0.003 | 0.71 | 0.0 | 0.04 | 14.13 | 0.00 | 2.014 | 14.18 | 0.15 | 5.4 | 94.6 | 0.0 | -1.14 | 0.75 | 0.84 | 0.86 | 1.98 | 32092 | 3843 | 72 | 0 | 155 | 0 | 0 | logfile |
✘ | 7VoY | 32062 | 2023-02-24 | 2021-10-15 | 4.2 | 3.14 | — | 3.1 | 0.009 | 0.97 | 0.0 | 0.10 | 14.41 | 0.01 | 2.056 | 16.15 | 1.25 | 4.6 | 95.4 | 0.0 | 0.99 | 0.45 | 0.66 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22119 | 2479 | 71 | 0 | 44 | 0 | 0 | logfile |
✔ | 7V31 | 31649 | 2023-02-26 | 2021-08-10 | 2.9 | 2.99 | — | 3.0 | 0.007 | 0.90 | 11.0 | 0.05 | 15.74 | 0.01 | 1.681 | 10.59 | 0.36 | 3.4 | 96.5 | 0.1 | 0.59 | 0.79 | 0.87 | 3.49 | 3.0 | 0.003 | 0.57 | 0.0 | 0.04 | 16.83 | 0.00 | 2.081 | 7.16 | 1.41 | 3.7 | 96.3 | 0.0 | 0.96 | 0.37 | 0.78 | 0.88 | 3.06 | 68204 | 8269 | 71 | 0 | 47 | 0 | 0 | logfile |
✔ | 6ZKD | 11245 | 2023-02-26 | 2020-06-30 | 2.7 | 2.83 | — | 2.7 | 0.008 | 1.02 | 0.0 | 1.03 | 11.89 | 0.01 | 2.196 | 5.23 | 0.06 | 3.4 | 96.6 | 0.0 | -2.68 | 0.77 | 0.87 | 4.54 | 2.7 | 0.009 | 1.59 | 0.0 | 0.31 | 15.81 | 0.00 | 1.476 | 10.67 | 1.60 | 3.1 | 96.9 | 0.0 | 0.70 | 1.61 | 0.78 | 0.89 | 3.76 | 67450 | 8160 | 71 | 0 | 46 | 0 | 0 | logfile |