The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7MSZ | 23972 | 2024-03-28 | 2021-05-12 | 3.1 | 2.44 | — | 2.9 | 0.013 | 1.14 | 1.0 | 0.06 | 22.78 | 0.01 | 1.949 | 3.55 | 0.54 | 9.3 | 90.6 | 0.1 | -4.96 | 0.83 | 0.84 | 3.69 | 2.9 | 0.008 | 0.78 | 0.0 | 0.04 | 22.66 | 0.01 | 1.764 | 8.48 | 4.69 | 8.4 | 91.5 | 0.1 | -2.28 | 0.46 | 0.83 | 0.85 | 2.69 | 152345 | 6171 | 72 | 4836 | 427 | 0 | 0 | logfile |
✔ | 7MSM | 23969 | 2024-03-01 | 2021-05-11 | 2.79 | 2.41 | — | 2.8 | 0.009 | 0.88 | 0.0 | 0.05 | 22.18 | 0.01 | 2.013 | 2.32 | 0.18 | 6.8 | 93.1 | 0.2 | -4.70 | 0.86 | 0.87 | 4.28 | 2.8 | 0.007 | 0.68 | 0.0 | 0.04 | 22.28 | 0.01 | 1.838 | 6.13 | 2.82 | 6.4 | 93.5 | 0.1 | -1.48 | 0.42 | 0.85 | 0.88 | 3.22 | 152436 | 6179 | 69 | 4836 | 455 | 0 | 0 | logfile |
✔ | 7MSC | 23961 | 2024-03-01 | 2021-05-11 | 2.97 | 2.46 | — | 2.9 | 0.009 | 0.88 | 0.0 | 0.05 | 22.15 | 0.01 | 2.009 | 2.25 | 0.12 | 6.9 | 92.9 | 0.2 | -4.68 | 0.85 | 0.87 | 4.04 | 2.9 | 0.009 | 0.75 | 0.0 | 0.04 | 22.31 | 0.01 | 1.767 | 5.50 | 3.63 | 6.7 | 93.1 | 0.2 | -1.54 | 0.40 | 0.85 | 0.88 | 2.99 | 152447 | 6179 | 69 | 4836 | 453 | 0 | 0 | logfile |
✔ | 7MT3 | 23975 | 2024-03-24 | 2021-05-12 | 2.8 | 2.45 | — | 2.9 | 0.007 | 0.79 | 0.0 | 0.04 | 22.33 | 0.01 | 1.298 | 2.40 | 0.13 | 7.0 | 92.9 | 0.1 | -4.52 | 0.84 | 0.86 | 4.06 | 2.9 | 0.007 | 0.65 | 0.0 | 0.04 | 22.39 | 0.01 | 1.038 | 5.99 | 2.40 | 6.5 | 93.4 | 0.1 | -1.13 | 2.16 | 0.84 | 0.87 | 3.16 | 147942 | 5616 | 68 | 4835 | 441 | 0 | 0 | logfile |
✔ | 7MT2 | 23974 | 2024-03-24 | 2021-05-12 | 2.76 | 2.45 | — | 2.9 | 0.007 | 0.77 | 0.0 | 0.04 | 22.21 | 0.01 | 2.005 | 2.23 | 0.07 | 6.3 | 93.6 | 0.1 | -4.55 | 0.85 | 0.87 | 4.29 | 2.9 | 0.008 | 0.72 | 0.0 | 0.04 | 22.32 | 0.01 | 1.793 | 5.37 | 3.25 | 6.3 | 93.6 | 0.1 | -1.24 | 0.38 | 0.85 | 0.88 | 3.40 | 148054 | 5629 | 69 | 4835 | 449 | 0 | 0 | logfile |
✔ | 7MSH | 23962 | 2024-03-27 | 2021-05-11 | 3.23 | 2.43 | — | 3.0 | 0.008 | 0.89 | 0.0 | 0.05 | 22.51 | 0.01 | 1.993 | 3.36 | 0.06 | 8.8 | 91.1 | 0.1 | -4.94 | 0.80 | 0.81 | 3.38 | 3.0 | 0.009 | 0.81 | 0.0 | 0.05 | 22.47 | 0.01 | 1.743 | 9.11 | 2.81 | 8.6 | 91.3 | 0.0 | -2.29 | 1.15 | 0.81 | 0.83 | 2.53 | 152103 | 6149 | 71 | 4833 | 428 | 0 | 0 | logfile |
✔ | 5o61 | 3751 | 2024-03-27 | 2017-06-03 | 3.31 | 3.39 | — | 3.3 | 0.007 | 0.99 | 0.0 | 0.04 | 24.46 | 0.01 | 1.579 | 7.50 | 10.91 | 4.7 | 95.1 | 0.2 | -3.02 | 0.83 | 0.88 | 2.03 | 3.3 | 0.005 | 0.65 | 0.0 | 0.04 | 23.97 | 0.00 | 1.052 | 11.55 | 7.11 | 4.7 | 95.3 | 0.0 | -0.14 | 0.65 | 0.83 | 0.87 | 1.63 | 151463 | 6088 | 73 | 4830 | 631 | 0 | 0 | logfile |
✔ | 7KGB | 22865 | 2024-03-22 | 2020-10-16 | 2.7 | 2.99 | 2.72 | 2.8 | 0.007 | 0.65 | 0.0 | 0.05 | 23.04 | 0.01 | 1.846 | 7.37 | 0.02 | 7.2 | 92.6 | 0.2 | -1.01 | 0.91 | 0.91 | 3.59 | 2.8 | 0.006 | 0.66 | 0.0 | 0.04 | 23.03 | 0.01 | 1.786 | 7.55 | 4.07 | 7.1 | 92.8 | 0.2 | -0.57 | 1.08 | 0.91 | 0.92 | 3.20 | 145319 | 5262 | 67 | 4829 | 454 | 0 | 0 | logfile |
✔ | 5KPV | 8280 | 2024-03-02 | 2016-07-05 | 4.1 | 5.32 | 4.22 | 4.1 | 0.008 | 1.18 | 5.0 | 0.09 | 22.93 | 0.01 | 2.074 | 34.60 | 0.66 | 13.5 | 80.3 | 6.2 | -4.67 | 0.90 | 0.78 | — | 4.1 | 0.004 | 0.70 | 0.0 | 0.04 | 23.46 | 0.01 | 2.026 | 29.54 | 0.00 | 10.9 | 88.2 | 0.9 | -1.99 | 1.78 | 0.94 | 0.90 | — | 154603 | 6623 | 59 | 4812 | 0 | 0 | 0 | logfile |
✔ | 5UYK | 8615 | 2024-03-02 | 2017-02-24 | 3.9 | 4.36 | 4.13 | 3.8 | 0.008 | 1.03 | 0.0 | 0.09 | 22.22 | 0.01 | 2.162 | 11.52 | 0.88 | 11.8 | 86.4 | 1.7 | -4.85 | 0.89 | 0.83 | 1.06 | 3.6 | 0.006 | 0.74 | 1.0 | 0.04 | 23.58 | 0.01 | 1.881 | 25.39 | 5.74 | 11.3 | 88.6 | 0.1 | -2.61 | 3.67 | 0.89 | 0.85 | 0.75 | 154412 | 6563 | 60 | 4812 | 1 | 0 | 0 | logfile |
✘ | 5KPW | 8281 | 2024-03-28 | 2016-07-05 | 3.9 | 5.27 | 4.08 | 3.8 | 0.007 | 1.11 | 5.0 | 0.09 | 22.51 | 0.01 | 2.191 | 24.08 | 0.79 | 12.9 | 81.4 | 5.7 | -4.53 | 0.90 | 0.77 | 0.51 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 154603 | 6623 | 59 | 4812 | 0 | 0 | 0 | logfile |
✔ | 5KPX | 8282 | 2024-03-02 | 2016-07-05 | 3.9 | 5.30 | 4.08 | 3.8 | 0.008 | 1.18 | 6.0 | 0.09 | 22.84 | 0.01 | 2.087 | 29.88 | 0.58 | 13.2 | 80.2 | 6.6 | -4.56 | 0.90 | 0.77 | 0.50 | 4.0 | 0.006 | 0.80 | 1.0 | 0.04 | 23.90 | 0.01 | 1.550 | 36.46 | 4.53 | 11.5 | 87.5 | 1.0 | -2.35 | 1.08 | 0.94 | 0.90 | 0.13 | 154603 | 6623 | 59 | 4812 | 0 | 0 | 0 | logfile |
✔ | 5UYP | 8619 | 2024-03-02 | 2017-02-24 | 3.9 | 4.42 | 4.29 | 3.6 | 0.007 | 1.07 | 0.0 | 0.09 | 22.43 | 0.01 | 1.318 | 13.07 | 1.57 | 14.3 | 82.6 | 3.1 | -5.15 | 0.87 | 0.79 | 0.53 | 3.6 | 0.004 | 0.73 | 0.0 | 0.04 | 23.84 | 0.01 | 1.030 | 28.72 | 5.39 | 12.3 | 87.6 | 0.2 | -3.02 | 0.77 | 0.87 | 0.82 | 0.39 | 153780 | 6476 | 63 | 4811 | 1 | 0 | 0 | logfile |
✔ | 7K53 | 22672 | 2024-03-26 | 2020-09-16 | 3.2 | 3.74 | — | 3.1 | 0.009 | 1.10 | 0.0 | 0.09 | 22.55 | 0.01 | 1.865 | 18.16 | 1.50 | 14.1 | 84.8 | 1.1 | -3.74 | 0.87 | 0.85 | 1.69 | 3.1 | 0.005 | 0.69 | 0.0 | 0.04 | 23.23 | 0.01 | 1.983 | 16.32 | 6.44 | 12.1 | 87.8 | 0.1 | -2.20 | 0.50 | 0.88 | 0.88 | 1.56 | 149698 | 5945 | 60 | 4811 | 0 | 0 | 0 | logfile |
✔ | 6WDA | 21629 | 2024-03-01 | 2020-03-31 | 3.8 | 4.14 | 4.11 | 3.9 | 0.006 | 0.93 | 0.0 | 0.08 | 22.01 | 0.01 | 1.314 | 10.79 | 0.69 | 10.6 | 87.8 | 1.6 | -4.79 | 0.84 | 0.82 | 0.86 | 3.9 | 0.005 | 0.74 | 0.0 | 0.04 | 23.49 | 0.01 | 2.007 | 25.67 | 6.64 | 10.7 | 89.2 | 0.1 | -2.40 | 0.71 | 0.86 | 0.83 | 0.58 | 152933 | 6373 | 62 | 4811 | 0 | 0 | 0 | logfile |
✔ | 6WD4 | 21623 | 2024-03-01 | 2020-03-31 | 3.7 | 4.02 | 4.02 | 3.9 | 0.006 | 0.94 | 0.0 | 0.08 | 22.02 | 0.01 | 1.313 | 10.87 | 0.48 | 11.3 | 87.0 | 1.7 | -4.79 | 0.83 | 0.83 | 0.81 | 3.8 | 0.005 | 0.75 | 0.0 | 0.04 | 23.32 | 0.01 | 2.016 | 24.13 | 6.56 | 11.6 | 88.3 | 0.2 | -2.51 | 0.65 | 0.84 | 0.84 | 0.75 | 153083 | 6391 | 62 | 4811 | 0 | 0 | 0 | logfile |
✔ | 6WD5 | 21624 | 2024-03-01 | 2020-03-31 | 3.6 | 3.95 | 3.98 | 3.8 | 0.006 | 0.94 | 0.0 | 0.08 | 22.09 | 0.01 | 1.312 | 11.60 | 0.77 | 11.6 | 86.5 | 2.0 | -4.87 | 0.83 | 0.83 | 1.21 | 3.8 | 0.004 | 0.70 | 0.0 | 0.04 | 23.38 | 0.00 | 2.034 | 21.44 | 6.80 | 10.9 | 89.0 | 0.2 | -2.50 | 0.66 | 0.84 | 0.84 | 0.86 | 153135 | 6400 | 62 | 4811 | 0 | 0 | 0 | logfile |
✔ | 6WD3 | 21622 | 2024-03-01 | 2020-03-31 | 3.6 | 3.96 | 3.97 | 3.8 | 0.006 | 0.95 | 0.0 | 0.08 | 22.07 | 0.01 | 1.315 | 11.55 | 0.96 | 12.0 | 86.3 | 1.8 | -4.89 | 0.83 | 0.83 | 1.34 | 3.8 | 0.006 | 0.79 | 0.0 | 0.04 | 23.42 | 0.01 | 1.999 | 26.14 | 7.31 | 11.4 | 88.5 | 0.2 | -2.55 | 1.49 | 0.84 | 0.84 | 0.96 | 153211 | 6408 | 62 | 4811 | 0 | 0 | 0 | logfile |
✔ | 6WD6 | 21625 | 2024-03-01 | 2020-03-31 | 3.7 | 4.07 | 4.15 | 3.9 | 0.006 | 0.94 | 0.0 | 0.08 | 22.03 | 0.01 | 1.316 | 11.51 | 0.71 | 11.1 | 87.3 | 1.6 | -4.98 | 0.83 | 0.82 | 0.92 | 3.9 | 0.005 | 0.74 | 0.0 | 0.04 | 23.46 | 0.01 | 2.049 | 24.55 | 6.10 | 10.4 | 89.4 | 0.2 | -2.60 | 1.49 | 0.84 | 0.83 | 0.78 | 153103 | 6396 | 62 | 4811 | 0 | 0 | 0 | logfile |
✔ | 6WD9 | 21628 | 2024-03-01 | 2020-03-31 | 3.7 | 4.05 | 4.07 | 3.9 | 0.006 | 0.94 | 0.0 | 0.08 | 22.07 | 0.01 | 1.313 | 11.26 | 0.54 | 10.7 | 87.6 | 1.7 | -4.88 | 0.83 | 0.82 | 1.03 | 3.9 | 0.006 | 0.78 | 0.0 | 0.04 | 23.53 | 0.01 | 1.976 | 26.89 | 6.96 | 11.6 | 88.2 | 0.2 | -2.51 | 0.70 | 0.85 | 0.83 | 0.69 | 152927 | 6371 | 62 | 4811 | 0 | 0 | 0 | logfile |