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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6U9V | 20702 | 2023-02-26 | 2019-09-09 | 2.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 26701 | 1680 | 15 | 3 | 54 | 0 | 12634 | logfile |
✘ | 7RWA | 24712 | 2023-02-22 | 2021-08-19 | 4.7 | 5.66 | 4.89 | 4.6 | 0.003 | 0.89 | 0.0 | 0.05 | 5.84 | 0.00 | 1.914 | 2.65 | 0.00 | 5.8 | 93.7 | 0.5 | -0.12 | 0.84 | 0.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16158 | 3244 | 10 | 0 | 0 | 0 | 0 | logfile |
✘ | 7UNL | 26626 | 2023-02-20 | 2022-04-11 | 2.45 | 3.35 | 2.50 | 3.1 | 0.003 | 0.56 | 0.0 | 0.04 | 14.66 | 0.00 | 2.143 | 2.41 | 1.94 | 1.1 | 98.9 | 0.0 | 2.30 | 0.72 | 0.83 | 3.52 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11724 | 734 | 6 | 0 | 8 | 120 | 5900 | logfile |
✘ | 6VFi | 21173 | 2023-02-22 | 2020-01-05 | 4.54 | 4.63 | 4.96 | 4.5 | 0.018 | 1.47 | 0.0 | 0.09 | 10.93 | 0.01 | 2.449 | 0.53 | 0.00 | 1.3 | 98.7 | 0.0 | 1.21 | 0.80 | 0.78 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 58488 | 7560 | 48 | 0 | 0 | 0 | 0 | logfile |
✘ | 7DX4 | 30895 | 2023-02-18 | 2021-01-18 | 3.6 | 3.96 | — | 3.8 | 0.007 | 0.99 | 0.0 | 0.06 | 10.06 | 0.01 | 0.766 | 7.21 | 0.23 | 6.0 | 93.7 | 0.3 | -4.20 | 0.71 | 0.79 | 3.35 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8234 | 1027 | 6 | 0 | 5 | 0 | 0 | logfile |
✘ | 7LD5 | 23282 | 2023-02-21 | 2021-01-12 | 3.07 | 3.46 | — | 3.4 | 0.006 | 0.67 | 0.0 | 0.05 | 16.01 | 0.00 | 2.102 | 8.95 | 6.51 | 4.3 | 95.7 | 0.0 | -2.06 | 0.77 | 0.82 | 2.94 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13542 | 1761 | 9 | 15 | 6 | 0 | 0 | logfile |
✘ | 6SNH | 10257 | 2023-02-19 | 2019-08-24 | 3.9 | 4.16 | — | 3.9 | 0.008 | 1.24 | 1.0 | 0.06 | 14.34 | 0.00 | 2.181 | 19.63 | 1.49 | 11.0 | 88.9 | 0.1 | -4.30 | 0.65 | 0.71 | 2.25 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7315 | 918 | 4 | 0 | 1 | 1 | 0 | logfile |
✘ | 6H3i | 0133 | 2023-02-23 | 2018-07-18 | 3.5 | 3.59 | — | 3.5 | 0.009 | 0.92 | 0.0 | 0.05 | 10.08 | 0.01 | 2.012 | 39.59 | 0.40 | 21.4 | 78.4 | 0.2 | -5.64 | 0.78 | 0.86 | 4.47 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20599 | 2597 | 3 | 0 | 0 | 0 | 53 | logfile |
✘ | 6T0N | 10356 | 2023-02-21 | 2019-10-03 | 2.54 | 2.64 | 2.56 | 2.6 | 0.005 | 0.69 | 0.0 | 0.05 | 14.69 | 0.01 | 2.105 | 3.18 | 4.90 | 4.3 | 95.4 | 0.2 | -2.43 | 0.73 | 0.89 | 4.53 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14598 | 1703 | 12 | 29 | 2 | 268 | 0 | logfile |
✘ | 7VRV | 32107 | 2023-02-25 | 2021-10-25 | 4.2 | 4.29 | — | 4.2 | 0.003 | 0.64 | 0.0 | 0.05 | 13.14 | 0.00 | 2.071 | 14.14 | 0.00 | 6.7 | 93.3 | 0.0 | -2.00 | 0.76 | 0.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 26151 | 3257 | 19 | 0 | 57 | 0 | 0 | logfile |
✘ | 6WEK | 21650 | 2023-02-22 | 2020-04-02 | 2.7 | 3.19 | — | 3.1 | 0.019 | 1.56 | 24.0 | 0.08 | 15.78 | 0.01 | 1.988 | 10.13 | 4.95 | 4.8 | 95.2 | 0.0 | -1.65 | 0.63 | 0.81 | 3.60 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17616 | 2048 | 8 | 0 | 32 | 0 | 0 | logfile |
✘ | 6JP5 | 9866 | 2023-02-24 | 2019-03-25 | 2.9 | 3.03 | — | 3.1 | 0.016 | 1.53 | 4.0 | 0.12 | 14.51 | 0.01 | 1.921 | 28.81 | 6.11 | 7.7 | 91.7 | 0.6 | -3.65 | 0.56 | 0.62 | 2.05 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22068 | 2694 | 14 | 0 | 39 | 0 | 0 | logfile |
✘ | 6JCV | 9798 | 2023-02-27 | 2019-01-30 | 2.92 | 4.05 | — | 3.7 | 0.007 | 0.90 | 0.0 | 0.06 | 13.94 | 0.01 | 2.341 | 4.98 | 0.00 | 5.2 | 94.8 | 0.0 | -5.68 | 0.87 | 0.86 | 3.38 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30876 | 3912 | 31 | 0 | 24 | 96 | 0 | logfile |
✘ | 6U9W | 20703 | 2023-02-26 | 2019-09-09 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 26919 | 1686 | 12 | 3 | 42 | 0 | 12885 | logfile |
✘ | 7UB5 | 26435 | 2023-02-25 | 2022-03-14 | 3.35 | 3.64 | 3.34 | 3.5 | 0.003 | 0.63 | 0.0 | 0.05 | 13.14 | 0.01 | 2.287 | 3.61 | 0.00 | 3.5 | 96.5 | 0.0 | -0.85 | 0.85 | 0.87 | 3.11 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24923 | 3104 | 16 | 0 | 47 | 0 | 0 | logfile |
✘ | 8DK2 | 27481 | 2023-02-24 | 2022-07-01 | 4.1 | 4.81 | 4.17 | 4.1 | 0.002 | 0.47 | 0.0 | 0.04 | 13.54 | 0.00 | 1.988 | 7.70 | 2.88 | 3.7 | 96.3 | 0.0 | 2.05 | 0.84 | 0.80 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 23727 | 2840 | 12 | 52 | 4 | 0 | 0 | logfile |
✘ | 8EFo | 28086 | 2023-02-20 | 2022-09-08 | 2.8 | 2.69 | 2.95 | 3.0 | 0.004 | 0.85 | 0.0 | 0.06 | 8.02 | 0.01 | 2.241 | 5.81 | 0.00 | 1.5 | 98.5 | 0.0 | -0.93 | 0.59 | 0.76 | 3.19 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11708 | 1441 | 9 | 0 | 12 | 0 | 0 | logfile |
✘ | 6JPA | 9868 | 2023-02-24 | 2019-03-26 | 2.6 | 2.76 | — | 2.8 | 0.013 | 1.50 | 3.0 | 0.12 | 17.43 | 0.01 | 1.921 | 38.35 | 11.40 | 8.8 | 89.5 | 1.7 | -3.83 | 0.54 | 0.61 | 1.56 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22232 | 2694 | 14 | 0 | 42 | 0 | 0 | logfile |
✘ | 6PLT | 20375 | 2023-02-21 | 2019-07-01 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14445 | 1725 | 15 | 0 | 60 | 0 | 0 | logfile |
✘ | 8E4C | 27888 | 2023-02-17 | 2022-08-18 | 4.0 | 3.22 | 3.15 | 3.1 | 0.005 | 0.83 | 2.0 | 0.07 | 16.39 | 0.01 | 2.251 | 7.49 | 1.84 | 6.1 | 93.9 | 0.0 | -0.24 | 0.48 | 0.49 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6398 | 805 | 6 | 0 | 5 | 0 | 0 | logfile |