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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7PTY | 13643 | 2023-08-13 | 2021-09-27 | 4.63 | 5.10 | — | 4.5 | 0.003 | 0.68 | 0.0 | 0.04 | 13.76 | 0.00 | 2.199 | 25.20 | 0.00 | 10.9 | 89.1 | 0.0 | -1.41 | 0.88 | 0.76 | — | 4.5 | 0.002 | 0.63 | 0.0 | 0.04 | 13.82 | 0.00 | 2.163 | 16.37 | 0.00 | 7.9 | 92.1 | 0.0 | -0.80 | 0.39 | 0.89 | 0.77 | — | 13433 | 1715 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SZ4 | 25560 | 2023-08-26 | 2021-11-25 | 4.8 | 7.97 | 4.67 | 3.9 | 0.003 | 0.79 | 0.0 | 0.05 | 14.41 | 0.01 | 2.097 | 25.58 | 0.02 | 18.8 | 80.5 | 0.7 | -3.20 | 0.89 | 0.78 | — | 3.9 | 0.009 | 0.82 | 0.0 | 0.05 | 14.68 | 0.01 | 1.934 | 31.94 | 0.00 | 20.0 | 79.3 | 0.7 | -3.11 | 0.49 | 0.88 | 0.76 | — | 48242 | 5973 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KPW | 22990 | 2023-08-09 | 2020-11-12 | 4.9 | 5.04 | 4.74 | 4.9 | 0.009 | 1.54 | 4.0 | 0.10 | 1.89 | 0.01 | 2.279 | 3.61 | 0.00 | 3.9 | 94.9 | 1.2 | 4.09 | 0.75 | 0.67 | — | 4.9 | 0.003 | 0.73 | 0.0 | 0.04 | 5.85 | 0.00 | 2.148 | 2.79 | 0.00 | 11.5 | 87.9 | 0.6 | -0.50 | 2.04 | 0.82 | 0.82 | — | 4313 | 865 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DTW | 30856 | 2023-08-11 | 2021-01-06 | 4.5 | 4.74 | — | 3.6 | 0.008 | 1.01 | 0.0 | 0.06 | 13.74 | 0.01 | 2.267 | 9.20 | 0.00 | 10.3 | 89.7 | 0.0 | -4.26 | 0.71 | 0.78 | — | 3.7 | 0.002 | 0.59 | 0.0 | 0.05 | 12.54 | 0.00 | 2.233 | 7.27 | 0.00 | 8.1 | 91.9 | 0.0 | -1.09 | 0.58 | 0.71 | 0.79 | — | 10250 | 1556 | 8 | 0 | 14 | 0 | 0 | logfile |
✔ | 7V27 | 31638 | 2023-08-09 | 2021-08-07 | 4.18 | 4.43 | — | 4.2 | 0.002 | 0.54 | 0.0 | 0.04 | 11.66 | 0.00 | 2.229 | 9.54 | 0.00 | 9.2 | 90.8 | 0.0 | -4.40 | 0.85 | 0.80 | — | 4.2 | 0.004 | 0.76 | 0.0 | 0.05 | 12.07 | 0.01 | 2.188 | 19.72 | 0.28 | 11.6 | 88.4 | 0.0 | -2.83 | 0.81 | 0.86 | 0.82 | — | 3252 | 421 | 4 | 0 | 1 | 0 | 0 | logfile |
✘ | 7B05 | 11957 | 2023-08-16 | 2020-11-18 | 3.8 | 3.93 | — | 3.8 | 0.009 | 0.82 | 0.0 | 0.04 | 15.44 | 0.00 | 2.267 | 8.97 | 0.00 | 8.1 | 91.9 | 0.0 | -0.12 | 0.81 | 0.85 | 2.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21056 | 2580 | 8 | 0 | 12 | 0 | 0 | logfile |
✘ | 6VDK | 21151 | 2023-08-12 | 2019-12-27 | 4.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12309 | 1274 | 14 | 104 | 6 | 0 | 0 | logfile |
✔ | 7DTU | 30854 | 2023-08-12 | 2021-01-06 | 4.4 | 4.54 | — | 3.7 | 0.006 | 0.90 | 0.0 | 0.06 | 14.57 | 0.01 | 2.277 | 6.85 | 0.00 | 9.4 | 90.6 | 0.0 | -3.95 | 0.68 | 0.79 | — | 3.7 | 0.003 | 0.62 | 0.0 | 0.04 | 13.14 | 0.00 | 2.169 | 11.99 | 0.00 | 6.5 | 93.5 | 0.0 | -0.70 | 1.10 | 0.68 | 0.80 | — | 10846 | 1558 | 8 | 0 | 14 | 0 | 0 | logfile |
✔ | 6BF8 | 7092 | 2023-08-14 | 2017-10-26 | 4.2 | 4.69 | 4.96 | 7.4 | 0.007 | 1.21 | 0.0 | 0.06 | 11.02 | 0.01 | 2.252 | 7.53 | 0.00 | 3.8 | 96.2 | 0.0 | -4.13 | 0.80 | 0.71 | — | 4.0 | 0.006 | 0.94 | 0.0 | 0.05 | 12.91 | 0.01 | 2.020 | 39.14 | 0.00 | 10.8 | 89.2 | 0.0 | -2.19 | 2.36 | 0.82 | 0.75 | — | 15412 | 1888 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8A64 | 15205 | 2023-08-10 | 2022-06-16 | 4.6 | 7.63 | 4.66 | 4.6 | 0.008 | 0.86 | 0.0 | 0.06 | 5.84 | 0.01 | 2.112 | 20.40 | 0.00 | 5.8 | 94.2 | 0.0 | -1.55 | 0.91 | 0.78 | — | 4.6 | 0.003 | 0.69 | 0.0 | 0.04 | 4.67 | 0.00 | 2.031 | 18.34 | 0.00 | 9.2 | 90.8 | 0.0 | -1.08 | 1.83 | 0.91 | 0.78 | — | 6737 | 1354 | 4 | 0 | 3 | 0 | 0 | logfile |
✘ | 7K10 | 22619 | 2023-08-11 | 2020-09-06 | 3.3 | 3.44 | — | 3.4 | 0.006 | 0.98 | 0.0 | 0.05 | 15.43 | 0.01 | 2.300 | 4.19 | 0.37 | 10.6 | 89.3 | 0.1 | -5.28 | 0.72 | 0.77 | 2.12 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10037 | 1259 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 7K5B | 22679 | 2023-08-14 | 2020-09-16 | 4.5 | 4.62 | — | 3.9 | 0.018 | 1.93 | 50.0 | 0.10 | 12.72 | 0.01 | 0.384 | 37.45 | 2.43 | 4.6 | 94.6 | 0.8 | -0.04 | 0.66 | 0.56 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 119573 | 15602 | 21 | 0 | 18 | 0 | 156 | logfile |
✘ | 6QEL | 4537 | 2023-08-12 | 2019-01-08 | 3.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 64816 | 4092 | 24 | 0 | 24 | 0 | 32302 | logfile |
✔ | 7UD5 | 26454 | 2023-08-17 | 2022-03-18 | 4.25 | 4.38 | 4.20 | 4.2 | 0.003 | 0.59 | 0.0 | 0.04 | 21.93 | 0.00 | 2.144 | 12.64 | 1.50 | 7.6 | 92.4 | 0.0 | -2.04 | 0.72 | 0.60 | — | 4.2 | 0.004 | 0.66 | 0.0 | 0.04 | 22.23 | 0.00 | 2.133 | 18.09 | 0.06 | 9.0 | 91.0 | 0.0 | -2.12 | 0.53 | 0.76 | 0.66 | — | 22713 | 2106 | 18 | 292 | 1 | 0 | 0 | logfile |
✔ | 7NXD | 12637 | 2023-08-12 | 2021-03-18 | 4.6 | 8.22 | 6.02 | 6.0 | 0.013 | 1.51 | 0.0 | 0.11 | 9.25 | 0.03 | 1.831 | 64.77 | 1.03 | 4.0 | 96.0 | 0.1 | -1.02 | 0.80 | 0.44 | — | 6.0 | 0.005 | 0.89 | 0.0 | 0.05 | 11.12 | 0.01 | 1.813 | 36.75 | 0.00 | 7.8 | 92.2 | 0.0 | -1.51 | 1.55 | 0.90 | 0.73 | — | 12805 | 1595 | 18 | 0 | 48 | 0 | 0 | logfile |
✔ | 8HGH | 34739 | 2023-08-18 | 2022-11-14 | 4.16 | 3.79 | 4.05 | 3.7 | 0.003 | 0.62 | 2.0 | 0.05 | 12.05 | 0.01 | 2.298 | 3.92 | 5.83 | 3.4 | 96.6 | 0.0 | -1.78 | 0.76 | 0.69 | — | 3.7 | 0.003 | 0.64 | 0.0 | 0.04 | 12.54 | 0.00 | 2.120 | 11.31 | 0.00 | 3.5 | 96.5 | 0.0 | -0.79 | 0.95 | 0.78 | 0.72 | — | 25512 | 3266 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 6RQC | 4980 | 2023-08-26 | 2019-05-15 | 4.4 | 4.57 | 4.38 | 4.4 | 0.012 | 1.28 | 1.0 | 0.07 | 18.21 | 0.01 | 1.965 | 9.13 | 0.54 | 10.4 | 89.5 | 0.1 | -5.03 | 0.79 | 0.67 | — | 4.4 | 0.005 | 0.75 | 0.0 | 0.04 | 17.12 | 0.01 | 1.824 | 19.87 | 0.00 | 12.6 | 87.4 | 0.0 | -2.74 | 3.23 | 0.80 | 0.70 | — | 105223 | 6174 | 23 | 176 | 15 | 0 | 51978 | logfile |
✔ | 7WG7 | 32479 | 2023-08-19 | 2021-12-28 | 4.0 | 4.39 | — | 4.2 | 0.005 | 0.88 | 0.0 | 0.06 | 14.25 | 0.01 | 2.237 | 6.84 | 0.07 | 7.8 | 92.2 | 0.0 | -2.10 | 0.86 | 0.78 | — | 4.2 | 0.002 | 0.64 | 0.0 | 0.05 | 15.70 | 0.00 | 2.121 | 12.40 | 0.14 | 7.6 | 92.4 | 0.0 | -1.24 | 1.13 | 0.87 | 0.78 | — | 27041 | 3313 | 25 | 0 | 73 | 0 | 0 | logfile |
✔ | 6S1N | 10081 | 2023-08-16 | 2019-06-19 | 4.86 | 4.98 | — | 4.8 | 0.009 | 1.13 | 2.0 | 0.06 | 17.87 | 0.01 | 1.929 | 9.59 | 0.83 | 6.3 | 93.4 | 0.4 | -3.47 | 0.73 | 0.53 | — | 4.8 | 0.003 | 0.76 | 0.0 | 0.04 | 16.36 | 0.00 | 2.138 | 16.34 | 0.00 | 4.6 | 95.3 | 0.0 | -0.83 | 3.65 | 0.83 | 0.73 | — | 19726 | 2399 | 11 | 50 | 3 | 0 | 0 | logfile |
✔ | 7PXD | 13698 | 2023-08-16 | 2021-10-08 | 4.0 | 2.58 | — | 2.8 | 0.006 | 0.93 | 0.0 | 0.05 | 14.08 | 0.01 | 2.068 | 8.55 | 3.29 | 4.0 | 95.9 | 0.1 | -1.07 | 0.68 | 0.67 | — | 2.8 | 0.004 | 0.63 | 0.0 | 0.04 | 15.45 | 0.00 | 1.905 | 7.76 | 0.31 | 3.2 | 96.8 | 0.0 | 1.58 | 0.81 | 0.71 | 0.71 | — | 68900 | 9015 | 42 | 0 | 12 | 0 | 0 | logfile |