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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6RRS | 4989 | 2022-05-16 | 2019-05-20 | 3.9 | 4.30 | 4.41 | 3.8 | 0.013 | 2.10 | 0.0 | 0.00 | 2.04 | 0.01 | 2.364 | 0.79 | 0.00 | 3.9 | 95.3 | 0.8 | -0.85 | 0.56 | 0.64 | — | 3.8 | 0.004 | 0.88 | 0.0 | 0.00 | 7.55 | 0.00 | 2.175 | 1.89 | 0.00 | 14.6 | 85.4 | 0.0 | -1.44 | 2.05 | 0.80 | 0.71 | — | 93060 | 23220 | 180 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZQN | 11369 | 2022-05-15 | 2020-07-10 | 4.0 | 3.59 | — | 3.5 | 0.008 | 0.85 | 0.0 | 0.05 | 15.11 | 0.00 | 1.537 | 13.59 | 0.02 | 8.6 | 91.4 | 0.0 | -1.45 | 0.69 | 0.77 | — | 3.5 | 0.004 | 0.57 | 0.0 | 0.04 | 15.65 | 0.00 | 1.742 | 10.00 | 0.14 | 5.4 | 94.6 | 0.0 | -0.06 | 0.37 | 0.69 | 0.77 | — | 80631 | 5165 | 42 | 0 | 16 | 17 | 40551 | logfile |
✔ | 6Uo9 | 20823 | 2022-05-13 | 2019-10-14 | 4.8 | 5.30 | — | 4.9 | 0.006 | 1.36 | 1.0 | 0.07 | 13.42 | 0.01 | 2.227 | 6.52 | 1.07 | 8.0 | 92.0 | 0.0 | -3.80 | 0.81 | 0.80 | — | 4.8 | 0.003 | 0.74 | 0.0 | 0.05 | 13.06 | 0.00 | 2.210 | 11.31 | 0.00 | 6.5 | 93.5 | 0.0 | -0.29 | 0.62 | 0.81 | 0.81 | — | 9915 | 1365 | 9 | 0 | 14 | 0 | 0 | logfile |
✘ | 7JMG | 22393 | 2022-05-14 | 2020-07-31 | 4.5 | 7.15 | — | 4.3 | 0.005 | 0.93 | 0.0 | 0.05 | 9.82 | 0.01 | 1.373 | 7.47 | 0.27 | 10.3 | 89.6 | 0.1 | -4.77 | 0.57 | 0.34 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✔ | 6VFK | 21185 | 2022-05-17 | 2020-01-05 | 4.25 | 4.39 | 4.20 | 4.3 | 0.021 | 1.41 | 0.0 | 0.09 | 10.30 | 0.01 | 2.389 | 0.89 | 0.00 | 1.3 | 98.7 | 0.0 | 2.59 | 0.84 | 0.81 | — | 4.2 | 0.003 | 0.57 | 0.0 | 0.04 | 13.24 | 0.00 | 2.187 | 9.56 | 0.00 | 1.8 | 98.0 | 0.2 | 3.96 | 1.03 | 0.84 | 0.84 | — | 37032 | 4764 | 24 | 0 | 0 | 0 | 0 | logfile |
✘ | 6KNG | 0731 | 2022-05-12 | 2019-08-05 | 2.85 | 3.15 | — | 3.1 | 0.005 | 0.65 | 0.0 | 0.05 | 14.34 | 0.00 | 2.093 | 5.36 | 3.68 | 0.9 | 99.1 | 0.0 | -2.31 | 0.83 | 0.91 | 4.61 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7749 | 1002 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 6VQ7 | 21318 | 2022-05-13 | 2020-02-04 | 4.0 | 4.63 | — | 4.2 | 0.009 | 0.98 | 2.0 | 0.06 | 10.86 | 0.01 | 2.219 | 3.92 | 0.61 | 2.5 | 97.3 | 0.2 | 0.65 | 0.79 | 0.72 | — | 4.2 | 0.004 | 0.86 | 0.0 | 0.05 | 14.28 | 0.00 | 1.949 | 21.56 | 0.46 | 4.3 | 95.7 | 0.0 | 0.70 | 1.47 | 0.82 | 0.81 | — | 62325 | 8454 | 35 | 0 | 2 | 0 | 0 | logfile |
✘ | 6KPJ | 0748 | 2022-05-13 | 2019-08-15 | 2.56 | 3.82 | — | 3.3 | 0.014 | 0.91 | 0.0 | 0.06 | 13.08 | 0.00 | 1.218 | 8.38 | 0.00 | 6.7 | 93.3 | 0.0 | -4.33 | 0.85 | 0.86 | 3.83 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 62845 | 3936 | 24 | 0 | 48 | 0 | 31225 | logfile |
✔ | 7JJJ | 22354 | 2022-05-12 | 2020-07-26 | 4.5 | 4.63 | 4.47 | 4.5 | 0.020 | 1.77 | 0.0 | 0.13 | 9.94 | 0.01 | 2.377 | 1.07 | 0.07 | 2.0 | 98.0 | 0.0 | 0.68 | 0.79 | 0.80 | — | 4.5 | 0.006 | 0.78 | 0.0 | 0.05 | 12.27 | 0.00 | 2.113 | 15.12 | 0.00 | 6.0 | 94.0 | 0.0 | -0.66 | 1.45 | 0.80 | 0.84 | — | 54614 | 6674 | 92 | 0 | 182 | 0 | 0 | logfile |
✔ | 7JMJ | 22396 | 2022-05-14 | 2020-07-31 | 4.5 | 5.51 | — | 4.3 | 0.007 | 1.08 | 0.0 | 0.05 | 10.58 | 0.01 | 1.373 | 10.02 | 0.62 | 11.3 | 88.5 | 0.3 | -4.67 | 0.56 | 0.31 | — | 4.3 | 0.004 | 0.97 | 4.0 | 0.05 | 11.79 | 0.01 | 2.058 | 21.05 | 0.00 | 11.7 | 88.1 | 0.2 | -3.79 | 0.81 | 0.78 | 0.63 | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✔ | 6ZPo | 11342 | 2022-05-15 | 2020-07-09 | 4.0 | 3.38 | — | 3.3 | 0.007 | 0.81 | 0.0 | 0.04 | 15.51 | 0.00 | 1.497 | 10.49 | 0.00 | 6.0 | 94.0 | 0.0 | -0.81 | 0.67 | 0.76 | — | 3.3 | 0.003 | 0.55 | 0.0 | 0.04 | 16.14 | 0.00 | 1.755 | 8.02 | 0.17 | 3.9 | 96.1 | 0.0 | 0.41 | 1.12 | 0.67 | 0.75 | — | 80353 | 5150 | 42 | 0 | 16 | 17 | 40405 | logfile |
✔ | 6ZJL | 11235 | 2022-05-17 | 2020-06-29 | 4.3 | 4.31 | — | 4.3 | 0.021 | 2.33 | 37.0 | 1.41 | 15.36 | 0.02 | 2.162 | 1.06 | 2.43 | 9.6 | 87.6 | 2.9 | -4.76 | 0.55 | 0.77 | — | 4.3 | 0.014 | 2.36 | 3.0 | 0.44 | 14.44 | 0.01 | 1.559 | 17.68 | 0.03 | 5.6 | 94.1 | 0.2 | -0.81 | 2.04 | 0.56 | 0.79 | — | 36057 | 4646 | 20 | 0 | 10 | 0 | 0 | logfile |
✔ | 6X0V | 21985 | 2022-05-12 | 2020-05-17 | 4.5 | 4.37 | — | 4.4 | 0.003 | 0.62 | 1.0 | 0.04 | 11.58 | 0.00 | 2.285 | 15.16 | 4.48 | 3.5 | 96.0 | 0.5 | -2.45 | 0.40 | 0.74 | — | 4.4 | 0.002 | 0.46 | 0.0 | 0.04 | 13.09 | 0.00 | 2.230 | 19.17 | 0.00 | 6.0 | 94.0 | 0.0 | 2.59 | 1.22 | 0.40 | 0.75 | — | 1384 | 211 | 4 | 0 | 0 | 0 | 62 | logfile |
✘ | 6YXR | 10995 | 2022-05-13 | 2020-05-03 | 3.4 | 3.53 | 3.43 | 3.5 | 0.019 | 2.23 | 2.0 | 0.13 | 19.52 | 0.02 | 1.197 | 27.04 | 0.44 | 4.1 | 95.7 | 0.3 | -3.53 | 0.67 | 0.76 | 2.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 31910 | 2783 | 20 | 0 | 194 | 0 | 0 | logfile |
✔ | 6VoH | 21264 | 2022-05-17 | 2020-01-30 | 4.16 | 3.96 | — | 4.0 | 0.005 | 0.99 | 0.0 | 0.05 | 15.53 | 0.01 | 2.172 | 14.17 | 0.49 | 7.7 | 92.0 | 0.3 | -3.96 | 0.70 | 0.74 | — | 3.9 | 0.006 | 0.87 | 0.0 | 0.05 | 15.25 | 0.01 | 2.108 | 19.11 | 0.02 | 8.2 | 91.7 | 0.2 | -1.55 | 0.67 | 0.69 | 0.72 | — | 39159 | 5193 | 31 | 0 | 5 | 0 | 0 | logfile |
✔ | 6W4o | 21535 | 2022-05-16 | 2020-03-11 | 4.8 | 5.05 | 4.72 | 4.7 | 0.004 | 0.77 | 1.0 | 0.05 | 10.85 | 0.00 | 0.834 | 16.31 | 0.91 | 3.0 | 96.7 | 0.2 | -1.53 | 0.83 | 0.70 | — | 4.7 | 0.005 | 0.80 | 0.0 | 0.05 | 12.92 | 0.01 | 2.115 | 26.69 | 0.00 | 2.7 | 97.1 | 0.2 | 0.29 | 1.37 | 0.89 | 0.83 | — | 14475 | 1789 | 13 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XJV | 22215 | 2022-05-16 | 2020-06-24 | 4.17 | 4.32 | — | 4.1 | 0.006 | 1.01 | 0.0 | 0.06 | 10.81 | 0.01 | 2.238 | 4.38 | 0.27 | 5.0 | 94.9 | 0.2 | -3.26 | 0.71 | 0.75 | — | 4.1 | 0.003 | 0.69 | 0.0 | 0.04 | 13.09 | 0.00 | 2.150 | 13.16 | 0.00 | 4.7 | 95.3 | 0.1 | 0.32 | 1.32 | 0.72 | 0.79 | — | 29921 | 3649 | 20 | 0 | 0 | 0 | 0 | logfile |
✘ | 6VXK | 21442 | 2022-05-14 | 2020-02-22 | 3.1 | 3.57 | — | 3.2 | 0.011 | 0.83 | 0.0 | 0.05 | 14.64 | 0.00 | 2.122 | 15.48 | 8.05 | 10.5 | 89.5 | 0.0 | -3.69 | 0.86 | 0.88 | 3.00 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17418 | 2254 | 8 | 0 | 18 | 0 | 0 | logfile |
✔ | 6XKU | 22225 | 2022-05-13 | 2020-06-27 | 4.2 | 4.32 | — | 4.2 | 0.009 | 1.00 | 1.0 | 0.07 | 13.77 | 0.01 | 1.987 | 25.70 | 0.16 | 16.5 | 83.2 | 0.4 | -4.29 | 0.75 | 0.73 | — | 4.2 | 0.004 | 0.81 | 0.0 | 0.04 | 13.63 | 0.01 | 2.083 | 13.13 | 0.00 | 10.7 | 89.1 | 0.1 | -0.84 | 2.21 | 0.79 | 0.81 | — | 13079 | 1678 | 12 | 0 | 8 | 0 | 0 | logfile |
✘ | 7AML | 11822 | 2022-05-16 | 2020-10-09 | 3.5 | 3.67 | 3.38 | 3.6 | 0.005 | 0.82 | 1.0 | 0.06 | 13.09 | 0.00 | 1.789 | 11.35 | 0.84 | 5.8 | 94.2 | 0.0 | -3.64 | 0.67 | 0.58 | 0.66 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 31304 | 1996 | 10 | 0 | 24 | 0 | 15286 | logfile |