The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7CCR | 30340 | 2022-05-16 | 2020-06-17 | 4.9 | 6.57 | — | 4.8 | 0.007 | 0.96 | 0.0 | 0.06 | 24.75 | 0.01 | 1.593 | 7.21 | 0.11 | 4.4 | 95.6 | 0.0 | -2.64 | 0.83 | 0.67 | — | 4.8 | 0.006 | 0.75 | 0.0 | 0.04 | 27.60 | 0.01 | 2.024 | 31.13 | 0.00 | 5.4 | 94.6 | 0.0 | -0.29 | 1.56 | 0.88 | 0.78 | — | 29722 | 2202 | 22 | 588 | 0 | 0 | 0 | logfile |
✔ | 7ELE | 31182 | 2022-05-13 | 2021-04-09 | 4.9 | 8.62 | — | 7.5 | 0.007 | 1.16 | 0.0 | 0.06 | 19.44 | 0.01 | 2.210 | 17.95 | 8.44 | 9.1 | 90.1 | 0.8 | -3.55 | 0.87 | 0.71 | — | 7.4 | 0.004 | 0.77 | 0.0 | 0.04 | 16.26 | 0.00 | 2.007 | 33.41 | 0.10 | 9.7 | 90.0 | 0.3 | -1.82 | 1.36 | 0.88 | 0.77 | — | 10733 | 1137 | 2 | 83 | 0 | 0 | 0 | logfile |
✔ | 7KPW | 22990 | 2022-05-12 | 2020-11-12 | 4.9 | 5.04 | 4.74 | 4.9 | 0.009 | 1.54 | 4.0 | 0.10 | 1.89 | 0.01 | 2.279 | 3.61 | 0.00 | 3.9 | 94.9 | 1.2 | 4.09 | 0.75 | 0.67 | — | 4.8 | 0.005 | 0.86 | 0.0 | 0.04 | 6.91 | 0.00 | 2.059 | 5.41 | 0.00 | 14.6 | 84.8 | 0.6 | -1.66 | 2.04 | 0.83 | 0.83 | — | 4313 | 865 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7STi | 25429 | 2022-05-14 | 2021-11-13 | 4.9 | 6.34 | — | 4.3 | 0.004 | 0.67 | 0.0 | 0.04 | 13.50 | 0.00 | 2.001 | 25.90 | 0.20 | 7.8 | 92.0 | 0.2 | -1.35 | 0.89 | 0.83 | — | 4.3 | 0.003 | 0.65 | 0.0 | 0.05 | 13.46 | 0.00 | 2.134 | 22.71 | 0.00 | 8.5 | 91.3 | 0.2 | -1.38 | 1.62 | 0.89 | 0.83 | — | 13531 | 1678 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JGG | 22326 | 2022-05-12 | 2020-07-19 | 4.88 | 8.00 | — | 7.7 | 0.002 | 0.46 | 0.0 | 0.03 | 13.22 | 0.00 | 1.988 | 54.49 | 0.00 | 3.3 | 96.5 | 0.2 | 1.67 | 0.66 | 0.64 | — | 7.5 | 0.002 | 0.46 | 0.0 | 0.03 | 12.61 | 0.00 | 1.976 | 80.83 | 0.00 | 4.5 | 95.5 | 0.0 | 1.72 | 1.70 | 0.67 | 0.69 | — | 4210 | 506 | 1 | 0 | 0 | 0 | 28 | logfile |
✔ | 6S1N | 10081 | 2022-05-14 | 2019-06-19 | 4.86 | 4.98 | — | 4.8 | 0.009 | 1.13 | 2.0 | 0.06 | 17.87 | 0.01 | 1.929 | 9.62 | 0.83 | 6.3 | 93.4 | 0.4 | -3.47 | 0.73 | 0.53 | — | 4.8 | 0.004 | 0.78 | 0.0 | 0.04 | 16.19 | 0.01 | 2.120 | 20.11 | 0.00 | 5.8 | 94.1 | 0.0 | -1.18 | 2.78 | 0.83 | 0.74 | — | 19726 | 2399 | 11 | 50 | 3 | 0 | 0 | logfile |
✘ | 6VY2 | 21456 | 2022-05-14 | 2020-02-25 | 4.86 | 6.05 | — | 5.2 | 0.006 | 0.91 | 0.0 | 0.07 | 14.28 | 0.00 | 2.056 | 18.44 | 4.96 | 5.7 | 93.8 | 0.5 | -2.41 | 0.82 | 0.78 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21426 | 2442 | 66 | 0 | 180 | 0 | 0 | logfile |
✔ | 7MDM | 23775 | 2022-05-16 | 2021-04-05 | 4.86 | 5.09 | — | 5.0 | 0.005 | 1.19 | 0.0 | 0.07 | 15.37 | 0.01 | 2.261 | 9.38 | 0.03 | 7.9 | 92.1 | 0.0 | -3.53 | 0.82 | 0.77 | — | 4.9 | 0.004 | 0.83 | 0.0 | 0.05 | 14.55 | 0.01 | 2.062 | 25.64 | 0.00 | 8.1 | 91.9 | 0.0 | -1.92 | 1.82 | 0.83 | 0.79 | — | 31986 | 4051 | 12 | 0 | 6 | 0 | 0 | logfile |
✘ | 6HE4 | 0209 | 2022-05-13 | 2018-08-20 | 4.85 | 4.88 | — | 4.8 | 0.036 | 3.64 | 111.0 | 0.21 | 18.70 | 0.03 | 1.953 | 1.87 | 3.66 | 6.4 | 89.5 | 4.1 | -2.84 | 0.55 | 0.56 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12684 | 1602 | 11 | 0 | 10 | 0 | 0 | logfile |
✔ | 6LHW | 0901 | 2022-05-13 | 2019-12-10 | 4.84 | 5.29 | — | 4.6 | 0.008 | 1.37 | 1.0 | 0.05 | 5.28 | 0.00 | 1.530 | 14.43 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.64 | 0.56 | — | 4.6 | 0.008 | 1.29 | 0.0 | 0.04 | 6.56 | 0.00 | 2.037 | 44.10 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.20 | 0.83 | 0.64 | — | 7644 | 0 | 3 | 0 | 1541 | 0 | 0 | logfile |
✔ | 7NK2 | 12429 | 2022-05-16 | 2021-02-17 | 4.84 | 4.93 | — | 4.8 | 0.004 | 0.73 | 2.0 | 0.05 | 13.61 | 0.01 | 1.907 | 8.81 | 0.32 | 4.3 | 95.7 | 0.0 | -0.71 | 0.61 | 0.43 | — | 4.8 | 0.004 | 0.70 | 0.0 | 0.04 | 13.73 | 0.01 | 1.840 | 20.24 | 0.00 | 7.0 | 93.0 | 0.0 | -1.05 | 4.61 | 0.73 | 0.67 | — | 28776 | 1794 | 6 | 23 | 0 | 0 | 13868 | logfile |
✔ | 7NJ7 | 12375 | 2022-05-16 | 2021-02-16 | 4.82 | 5.23 | — | 4.8 | 0.004 | 0.73 | 1.0 | 0.04 | 13.69 | 0.01 | 1.907 | 8.72 | 0.19 | 4.3 | 95.7 | 0.0 | -0.72 | 0.74 | 0.46 | — | 4.9 | 0.003 | 0.61 | 0.0 | 0.04 | 13.61 | 0.00 | 1.869 | 17.71 | 0.00 | 4.5 | 95.5 | 0.0 | -0.44 | 2.32 | 0.82 | 0.63 | — | 28818 | 1797 | 6 | 23 | 0 | 0 | 13868 | logfile |
✘ | 6JH6 | 9825 | 2022-05-12 | 2019-02-17 | 4.8 | 5.31 | — | 4.8 | 0.006 | 1.07 | 1.0 | 0.05 | 11.37 | 0.01 | 2.197 | 12.23 | 0.58 | 10.8 | 88.9 | 0.3 | -4.03 | 0.79 | 0.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 108924 | 14244 | 12 | 0 | 8 | 0 | 0 | logfile |
✔ | 6YRG | 10889 | 2022-05-14 | 2020-04-20 | 4.8 | 6.94 | — | 7.9 | 0.009 | 1.41 | 18.0 | 0.08 | 13.69 | 0.01 | 1.270 | 31.66 | 0.48 | 9.4 | 90.3 | 0.3 | -2.26 | 0.66 | 0.32 | — | 7.8 | 0.003 | 0.75 | 0.0 | 0.04 | 12.97 | 0.00 | 2.136 | 16.35 | 0.00 | 9.3 | 90.6 | 0.1 | -1.50 | 3.42 | 0.75 | 0.52 | — | 21992 | 2736 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LBM | 23255 | 2022-05-15 | 2021-01-08 | 4.8 | 3.22 | — | 2.3 | 0.009 | 1.08 | 22.0 | 0.06 | 16.06 | 0.01 | 1.016 | 31.95 | 1.26 | 11.3 | 88.0 | 0.7 | -3.89 | 0.57 | 0.46 | — | 2.0 | 0.006 | 0.91 | 0.0 | 0.05 | 14.84 | 0.01 | 1.897 | 22.65 | 0.01 | 8.9 | 91.0 | 0.1 | -1.34 | 1.50 | 0.61 | 0.60 | — | 129277 | 15887 | 68 | 128 | 19 | 0 | 0 | logfile |
✔ | 6D6V | 7821 | 2022-05-14 | 2018-04-22 | 4.8 | 5.14 | — | 4.6 | 0.013 | 1.70 | 1.0 | 0.08 | 19.43 | 0.01 | 1.189 | 25.73 | 0.97 | 15.8 | 83.5 | 0.7 | -4.28 | 0.84 | 0.74 | — | 4.6 | 0.004 | 0.83 | 0.0 | 0.05 | 19.09 | 0.01 | 2.070 | 30.44 | 0.00 | 15.1 | 84.9 | 0.0 | -2.37 | 1.55 | 0.86 | 0.79 | — | 17317 | 1535 | 9 | 178 | 158 | 0 | 0 | logfile |
✔ | 5W9L | 8787 | 2022-05-16 | 2017-06-23 | 4.8 | 4.95 | 4.82 | 4.8 | 0.014 | 1.71 | 0.0 | 0.08 | 10.52 | 0.01 | 1.520 | 4.79 | 0.06 | 4.5 | 94.7 | 0.9 | 0.78 | 0.75 | 0.76 | — | 4.8 | 0.004 | 0.76 | 0.0 | 0.04 | 12.81 | 0.00 | 2.045 | 17.01 | 0.00 | 6.9 | 92.9 | 0.2 | -0.83 | 1.72 | 0.75 | 0.79 | — | 31118 | 4020 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WJD | 21691 | 2022-05-17 | 2020-04-13 | 4.8 | 4.95 | — | 4.8 | 0.006 | 0.95 | 0.0 | 0.05 | 12.04 | 0.01 | 2.102 | 8.46 | 0.15 | 10.0 | 89.7 | 0.3 | -5.16 | 0.82 | 0.73 | — | 4.8 | 0.003 | 0.76 | 0.0 | 0.04 | 13.11 | 0.00 | 1.925 | 13.67 | 0.01 | 7.4 | 92.5 | 0.0 | -1.20 | 1.75 | 0.84 | 0.79 | — | 100757 | 13414 | 54 | 0 | 12 | 0 | 0 | logfile |
✔ | 7JGJ | 22328 | 2022-05-13 | 2020-07-19 | 4.8 | 7.06 | — | 6.5 | 0.013 | 2.22 | 17.0 | 0.31 | 17.49 | 0.01 | 1.656 | 7.23 | 12.68 | 7.2 | 91.6 | 1.2 | -2.09 | 0.88 | 0.68 | — | 6.5 | 0.003 | 0.76 | 0.0 | 0.04 | 13.54 | 0.00 | 2.130 | 27.09 | 0.00 | 7.7 | 92.2 | 0.1 | -2.19 | 1.26 | 0.84 | 0.48 | — | 13324 | 1707 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Y9Z | 10742 | 2022-05-14 | 2020-03-10 | 4.8 | 5.22 | 4.55 | 6.0 | 0.012 | 1.07 | 3.0 | 0.11 | 13.05 | 0.01 | 1.631 | 10.74 | 0.45 | 1.9 | 98.0 | 0.0 | -0.96 | 0.71 | 0.75 | — | 4.9 | 0.004 | 0.88 | 0.0 | 0.05 | 13.30 | 0.01 | 2.036 | 21.36 | 0.00 | 3.7 | 96.3 | 0.0 | -0.52 | 3.66 | 0.74 | 0.80 | — | 18418 | 2364 | 13 | 0 | 0 | 0 | 0 | logfile |