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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7Y1T | 33572 | 2023-04-20 | 2022-06-08 | 3.24 | 3.67 | 3.31 | 3.5 | 0.003 | 0.59 | 0.0 | 0.09 | 13.77 | 0.00 | 1.998 | 8.09 | 0.00 | 4.1 | 95.9 | 0.0 | -0.76 | 0.73 | 0.75 | 1.76 | 3.5 | 0.004 | 0.68 | 0.0 | 0.05 | 15.30 | 0.00 | 2.102 | 10.99 | 0.49 | 5.4 | 94.6 | 0.0 | -0.60 | 0.59 | 0.74 | 0.79 | 2.63 | 8112 | 1030 | 10 | 0 | 24 | 0 | 0 | logfile |
✔ | 7WLY | 32594 | 2023-04-28 | 2022-01-14 | 3.4 | 3.69 | — | 3.5 | 0.007 | 0.86 | 0.0 | 0.06 | 12.28 | 0.01 | 2.207 | 9.99 | 0.97 | 7.1 | 92.9 | 0.0 | -2.55 | 0.80 | 0.79 | 1.99 | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 14.15 | 0.00 | 2.118 | 9.56 | 0.32 | 4.4 | 95.6 | 0.0 | -0.94 | 0.57 | 0.81 | 0.81 | 1.79 | 28550 | 3627 | 12 | 0 | 31 | 0 | 0 | logfile |
✔ | 7PW7 | 13677 | 2023-04-23 | 2021-10-06 | 3.59 | 3.77 | — | 3.7 | 0.003 | 0.63 | 0.0 | 0.17 | 13.25 | 0.00 | 2.020 | 5.39 | 0.00 | 2.9 | 97.1 | 0.0 | 1.95 | 0.76 | 0.76 | 0.92 | 3.6 | 0.003 | 0.53 | 0.0 | 0.04 | 14.58 | 0.00 | 1.905 | 5.91 | 0.21 | 3.8 | 96.2 | 0.0 | 1.86 | 0.94 | 0.78 | 0.79 | 1.11 | 16227 | 2056 | 4 | 0 | 199 | 0 | 0 | logfile |
✔ | 7T3P | 25667 | 2023-04-24 | 2021-12-08 | 3.2 | 3.52 | 3.32 | 3.5 | 0.004 | 0.54 | 0.0 | 0.04 | 13.90 | 0.00 | 2.019 | 8.33 | 0.00 | 4.1 | 95.9 | 0.0 | 1.75 | 0.67 | 0.70 | 2.04 | 3.5 | 0.004 | 0.65 | 0.0 | 0.04 | 16.16 | 0.00 | 2.089 | 11.93 | 0.34 | 3.8 | 96.2 | 0.0 | 1.02 | 1.82 | 0.70 | 0.76 | 2.15 | 66992 | 8188 | 8 | 0 | 88 | 0 | 0 | logfile |
✔ | 7T3R | 25669 | 2023-04-26 | 2021-12-08 | 3.4 | 3.68 | 3.48 | 3.6 | 0.004 | 0.54 | 0.0 | 0.04 | 13.70 | 0.00 | 2.035 | 8.37 | 0.00 | 4.7 | 95.3 | 0.0 | 1.52 | 0.71 | 0.78 | 2.05 | 3.6 | 0.004 | 0.65 | 0.0 | 0.04 | 16.69 | 0.00 | 2.093 | 11.56 | 0.30 | 4.4 | 95.6 | 0.0 | 0.90 | 1.38 | 0.75 | 0.86 | 1.84 | 68780 | 8444 | 8 | 0 | 88 | 0 | 0 | logfile |
✘ | 6J6G | 0686 | 2023-04-29 | 2019-01-15 | 3.2 | 3.37 | — | 3.2 | 0.007 | 0.94 | 0.0 | 0.09 | 14.14 | 0.01 | 1.903 | 15.53 | 3.03 | 4.6 | 94.9 | 0.5 | -3.38 | 0.67 | 0.71 | 2.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 79042 | 8981 | 47 | 550 | 14 | 0 | 0 | logfile |
✔ | 7USX | 26742 | 2023-04-23 | 2022-04-26 | 3.09 | 3.45 | 3.15 | 3.4 | 0.004 | 0.86 | 0.0 | 0.04 | 16.31 | 0.01 | 2.223 | 9.94 | 0.14 | 3.7 | 96.3 | 0.0 | 1.65 | 0.62 | 0.78 | 1.63 | 3.4 | 0.003 | 0.52 | 0.0 | 0.04 | 16.37 | 0.00 | 2.183 | 6.95 | 0.14 | 3.5 | 96.5 | 0.0 | 1.86 | 0.30 | 0.56 | 0.78 | 1.38 | 14220 | 1670 | 12 | 0 | 54 | 0 | 0 | logfile |
✔ | 7EDH | 31071 | 2023-04-26 | 2021-03-16 | 3.6 | 4.18 | — | 4.0 | 0.004 | 0.67 | 0.0 | 0.05 | 13.66 | 0.00 | 2.189 | 7.03 | 0.16 | 6.4 | 93.3 | 0.3 | -1.26 | 0.80 | 0.78 | 2.26 | 4.0 | 0.002 | 0.58 | 0.0 | 0.04 | 15.28 | 0.00 | 2.170 | 6.90 | 0.20 | 6.0 | 93.7 | 0.3 | -0.88 | 0.36 | 0.81 | 0.78 | 2.11 | 23276 | 2846 | 36 | 0 | 77 | 0 | 0 | logfile |
✔ | 6YG8 | 10799 | 2023-04-27 | 2020-03-27 | 3.0 | 3.39 | — | 3.2 | 0.005 | 0.60 | 0.0 | 0.05 | 11.98 | 0.00 | 2.166 | 6.88 | 0.00 | 4.7 | 95.3 | 0.0 | -3.49 | 0.83 | 0.86 | 3.96 | 3.3 | 0.004 | 0.61 | 0.0 | 0.05 | 14.33 | 0.00 | 2.167 | 7.56 | 1.77 | 4.2 | 95.8 | 0.0 | -0.38 | 1.12 | 0.84 | 0.88 | 3.42 | 24330 | 3132 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DG9 | 27419 | 2023-04-23 | 2022-06-23 | 2.24 | 2.40 | 2.33 | 2.5 | 0.004 | 0.63 | 0.0 | 0.05 | 16.95 | 0.00 | 2.116 | 5.15 | 0.91 | 2.7 | 97.3 | 0.0 | -0.16 | 0.69 | 0.83 | 4.59 | 2.5 | 0.003 | 0.84 | 0.0 | 0.05 | 16.88 | 0.00 | 2.141 | 5.44 | 1.77 | 2.9 | 97.1 | 0.0 | 0.26 | 1.11 | 0.68 | 0.84 | 4.52 | 15450 | 2007 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 7LiK | 23381 | 2023-04-27 | 2021-01-27 | 2.91 | 3.15 | — | 3.2 | 0.007 | 0.93 | 0.0 | 0.06 | 14.31 | 0.01 | 2.239 | 2.52 | 3.02 | 6.8 | 93.2 | 0.0 | -1.80 | 0.79 | 0.86 | 3.33 | 3.2 | 0.005 | 0.77 | 0.0 | 0.05 | 16.30 | 0.01 | 2.318 | 1.66 | 2.51 | 7.1 | 92.9 | 0.0 | -1.17 | 0.25 | 0.80 | 0.88 | 2.68 | 130800 | 15900 | 60 | 0 | 60 | 0 | 0 | logfile |
✔ | 7EAZ | 31047 | 2023-04-27 | 2021-03-08 | 3.5 | 4.16 | — | 4.0 | 0.004 | 0.67 | 0.0 | 0.05 | 13.84 | 0.00 | 2.146 | 8.23 | 0.00 | 5.3 | 94.7 | 0.0 | -1.15 | 0.79 | 0.77 | 2.17 | 4.0 | 0.003 | 0.61 | 0.0 | 0.04 | 15.21 | 0.00 | 2.165 | 7.66 | 0.11 | 5.2 | 94.8 | 0.0 | -0.71 | 0.31 | 0.80 | 0.79 | 1.93 | 24956 | 3051 | 38 | 0 | 82 | 0 | 0 | logfile |
✔ | 7W94 | 32360 | 2023-04-27 | 2021-12-09 | 3.4 | 3.02 | — | 3.6 | 0.003 | 0.67 | 0.0 | 0.05 | 13.57 | 0.01 | 2.288 | 3.37 | 0.14 | 3.4 | 96.6 | 0.0 | -4.24 | 0.78 | 0.74 | 1.49 | 3.5 | 0.005 | 0.76 | 0.0 | 0.05 | 16.33 | 0.00 | 2.055 | 14.42 | 0.57 | 6.9 | 93.1 | 0.0 | -1.66 | 0.73 | 0.80 | 0.79 | 1.58 | 25082 | 3206 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EB5 | 31052 | 2023-04-27 | 2021-03-08 | 3.4 | 4.18 | — | 4.0 | 0.004 | 0.64 | 0.0 | 0.05 | 13.90 | 0.00 | 2.162 | 7.58 | 0.11 | 5.5 | 94.4 | 0.1 | -1.06 | 0.79 | 0.77 | 1.94 | 4.0 | 0.005 | 0.65 | 0.0 | 0.05 | 15.27 | 0.00 | 2.133 | 9.23 | 0.15 | 7.5 | 92.4 | 0.1 | -1.14 | 1.15 | 0.80 | 0.79 | 1.90 | 24902 | 3058 | 33 | 0 | 74 | 0 | 0 | logfile |
✔ | 6NYN | 0547 | 2023-04-26 | 2019-02-11 | 3.5 | 4.40 | — | 4.1 | 0.006 | 1.01 | 0.0 | 0.06 | 10.55 | 0.01 | 2.259 | 7.62 | 0.97 | 16.7 | 83.3 | 0.0 | -5.19 | 0.87 | 0.77 | 2.69 | 4.1 | 0.004 | 0.71 | 0.0 | 0.05 | 12.57 | 0.00 | 2.163 | 16.36 | 0.20 | 17.0 | 83.0 | 0.0 | -4.58 | 0.51 | 0.88 | 0.79 | 2.29 | 68664 | 9000 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7S6i | 24876 | 2023-04-27 | 2021-09-14 | 3.2 | 3.55 | 3.30 | 3.5 | 0.022 | 1.73 | 0.0 | 0.12 | 10.14 | 0.01 | 2.394 | 0.44 | 0.10 | 3.2 | 96.8 | 0.0 | 0.33 | 0.81 | 0.85 | 4.14 | 3.5 | 0.003 | 0.64 | 0.0 | 0.04 | 13.58 | 0.00 | 2.185 | 4.42 | 0.17 | 3.3 | 96.7 | 0.1 | -0.06 | 1.34 | 0.82 | 0.88 | 3.62 | 26772 | 3309 | 24 | 0 | 66 | 0 | 0 | logfile |
✔ | 7T6o | 25721 | 2023-04-25 | 2021-12-14 | 2.6 | 2.80 | — | 2.9 | 0.004 | 0.79 | 0.0 | 0.05 | 14.06 | 0.01 | 2.302 | 2.54 | 0.00 | 1.3 | 98.7 | 0.0 | -1.56 | 0.67 | 0.84 | 3.82 | 2.8 | 0.002 | 0.51 | 0.0 | 0.04 | 16.16 | 0.00 | 2.191 | 6.19 | 1.19 | 1.2 | 98.8 | 0.0 | 1.76 | 0.90 | 0.68 | 0.87 | 3.34 | 19412 | 2424 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V7U | 31782 | 2023-04-27 | 2021-08-21 | 3.0 | 3.56 | — | 3.4 | 0.005 | 0.64 | 0.0 | 0.05 | 13.78 | 0.00 | 2.194 | 7.34 | 0.00 | 4.8 | 95.1 | 0.1 | 0.24 | 0.81 | 0.84 | 2.19 | 3.4 | 0.004 | 0.62 | 0.0 | 0.05 | 15.32 | 0.00 | 2.161 | 6.96 | 1.52 | 4.3 | 95.7 | 0.1 | 0.20 | 0.41 | 0.81 | 0.85 | 2.13 | 25283 | 3088 | 41 | 0 | 83 | 0 | 0 | logfile |
✘ | 6J6Q | 0692 | 2023-04-29 | 2019-01-15 | 3.7 | 3.85 | — | 3.7 | 0.008 | 0.99 | 0.0 | 0.09 | 14.74 | 0.01 | 1.463 | 18.21 | 2.93 | 4.9 | 94.2 | 0.9 | -3.65 | 0.62 | 0.66 | 1.54 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 80535 | 9167 | 50 | 549 | 15 | 0 | 0 | logfile |
✔ | 7B6E | 12053 | 2023-04-19 | 2020-12-07 | 4.5 | 2.79 | — | 5.1 | 0.005 | 1.03 | 0.0 | 0.05 | 15.04 | 0.01 | 2.129 | 36.05 | 0.00 | 10.9 | 89.1 | 0.0 | -3.88 | 0.62 | 0.66 | — | 2.4 | 0.004 | 0.99 | 0.0 | 0.05 | 14.87 | 0.00 | 2.111 | 27.61 | 0.00 | 11.3 | 88.7 | 0.0 | -1.65 | 0.83 | 0.61 | 0.67 | — | 2205 | 269 | 1 | 0 | 0 | 0 | 0 | logfile |