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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7N1X | 24126 | 2022-05-15 | 2021-05-28 | 4.0 | 2.34 | — | 1.8 | 0.013 | 1.88 | 13.0 | 0.14 | 14.66 | 0.01 | 1.484 | 10.07 | 1.97 | 8.1 | 91.3 | 0.6 | -2.39 | 0.80 | 0.69 | — | 1.8 | 0.008 | 0.89 | 1.0 | 0.05 | 16.35 | 0.01 | 2.088 | 14.18 | 0.60 | 4.9 | 95.1 | 0.0 | -1.02 | 1.09 | 0.80 | 0.68 | — | 26810 | 3257 | 35 | 0 | 95 | 0 | 0 | logfile |
✔ | 7RPo | 24618 | 2022-05-13 | 2021-08-03 | 4.16 | 2.77 | — | 1.8 | 0.003 | 0.50 | 0.0 | 0.04 | 16.86 | 0.00 | 1.759 | 6.97 | 1.64 | 8.5 | 91.5 | 0.0 | -2.01 | 0.74 | 0.71 | — | 1.8 | 0.005 | 0.77 | 0.0 | 0.05 | 18.51 | 0.01 | 1.983 | 13.27 | 0.00 | 11.0 | 89.0 | 0.0 | -2.17 | 1.73 | 0.75 | 0.71 | — | 10602 | 1179 | 9 | 62 | 5 | 0 | 0 | logfile |
✔ | 7V9L | 31824 | 2022-05-12 | 2021-08-26 | 2.6 | 2.13 | — | 1.8 | 0.004 | 0.69 | 0.0 | 0.05 | 13.08 | 0.01 | 2.120 | 4.19 | 0.00 | 3.8 | 96.2 | 0.0 | 0.00 | 0.67 | 0.70 | 3.73 | 1.9 | 0.003 | 0.59 | 0.0 | 0.04 | 15.79 | 0.00 | 2.135 | 10.88 | 1.38 | 2.2 | 97.8 | 0.0 | 0.96 | 0.50 | 0.77 | 0.78 | 2.85 | 8047 | 1019 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TBG | 25798 | 2022-05-15 | 2021-12-22 | 2.5 | 2.10 | 2.44 | 1.8 | 0.006 | 0.76 | 0.0 | 0.05 | 13.03 | 0.01 | 2.268 | 1.99 | 0.57 | 3.2 | 96.8 | 0.0 | 0.60 | 0.75 | 0.79 | 4.65 | 1.8 | 0.004 | 0.58 | 0.0 | 0.04 | 16.02 | 0.00 | 2.091 | 5.00 | 1.60 | 2.1 | 97.9 | 0.0 | 2.32 | 1.13 | 0.77 | 0.82 | 3.72 | 19679 | 1190 | 6 | 0 | 5 | 20 | 9858 | logfile |
✔ | 7TDF | 25827 | 2022-05-15 | 2021-12-31 | 2.7 | 2.10 | 2.66 | 1.9 | 0.006 | 0.74 | 0.0 | 0.05 | 12.56 | 0.01 | 2.148 | 2.81 | 0.19 | 3.5 | 96.5 | 0.0 | 0.06 | 0.74 | 0.77 | 4.39 | 1.9 | 0.006 | 0.65 | 0.0 | 0.04 | 15.41 | 0.01 | 2.090 | 5.88 | 1.04 | 2.9 | 97.1 | 0.0 | 2.17 | 1.14 | 0.76 | 0.80 | 3.77 | 19566 | 1188 | 2 | 0 | 0 | 0 | 9792 | logfile |
✔ | 6S61 | 10101 | 2022-05-14 | 2019-07-02 | 1.84 | 1.89 | 1.85 | 1.9 | 0.011 | 1.36 | 0.0 | 0.06 | 12.21 | 0.01 | 0.312 | 2.62 | 1.29 | 1.8 | 98.2 | 0.0 | 3.69 | 0.77 | 0.86 | 8.46 | 1.9 | 0.003 | 0.57 | 0.0 | 0.03 | 14.82 | 0.00 | 1.798 | 5.19 | 0.65 | 1.8 | 98.2 | 0.0 | 4.54 | 0.74 | 0.79 | 0.89 | 8.65 | 71060 | 4128 | 72 | 0 | 30 | 3854 | 32904 | logfile |
✘ | 7EFD | 31084 | 2022-05-14 | 2021-03-21 | 1.77 | 1.79 | 1.83 | 1.9 | 0.033 | 3.16 | 60.0 | 0.09 | 15.47 | 0.02 | 0.000 | 2.38 | 2.15 | 1.7 | 97.5 | 0.8 | -0.54 | 0.71 | 0.78 | 5.66 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20020 | 2400 | 20 | 0 | 20 | 780 | 0 | logfile |
✔ | 7P6A | 13223 | 2022-05-12 | 2021-07-15 | 1.9 | 1.91 | 1.88 | 1.9 | 0.004 | 0.72 | 0.0 | 0.06 | 12.30 | 0.01 | 2.247 | 3.33 | 0.00 | 3.8 | 96.2 | 0.0 | -3.07 | 0.51 | 0.86 | 7.13 | 1.9 | 0.003 | 0.65 | 0.0 | 0.05 | 14.09 | 0.00 | 2.291 | 4.28 | 0.00 | 4.7 | 95.3 | 0.0 | -2.61 | 0.82 | 0.55 | 0.89 | 7.80 | 4166 | 540 | 10 | 0 | 0 | 76 | 0 | logfile |
✔ | 6WWR | 21945 | 2022-05-13 | 2020-05-09 | 2.7 | 2.08 | 2.69 | 1.9 | 0.009 | 0.96 | 1.0 | 0.06 | 14.63 | 0.01 | 1.967 | 5.49 | 0.57 | 5.8 | 94.2 | 0.0 | -3.62 | 0.60 | 0.77 | 5.00 | 2.0 | 0.004 | 0.67 | 0.0 | 0.04 | 16.99 | 0.00 | 1.916 | 6.86 | 1.72 | 3.9 | 96.1 | 0.0 | -0.28 | 1.08 | 0.62 | 0.84 | 3.85 | 9719 | 1220 | 6 | 1 | 4 | 0 | 0 | logfile |
✔ | 7N8o | 24239 | 2022-05-12 | 2021-06-15 | 1.93 | 1.73 | — | 1.9 | 0.024 | 2.36 | 0.0 | 0.13 | 20.20 | 0.01 | 1.522 | 14.85 | 1.91 | 3.0 | 96.9 | 0.1 | 0.75 | 0.73 | 0.75 | 5.48 | 1.9 | 0.005 | 0.77 | 0.0 | 0.04 | 18.49 | 0.01 | 2.020 | 11.59 | 1.40 | 2.6 | 97.4 | 0.0 | 1.31 | 0.36 | 0.75 | 0.77 | 5.38 | 54656 | 5544 | 113 | 0 | 228 | 1236 | 0 | logfile |
✔ | 7RCV | 24407 | 2022-05-12 | 2021-07-08 | 2.01 | 1.78 | — | 1.9 | 0.024 | 2.35 | 0.0 | 0.13 | 20.29 | 0.01 | 1.915 | 14.01 | 1.99 | 2.6 | 97.4 | 0.0 | 0.92 | 0.78 | 0.79 | 5.10 | 1.9 | 0.004 | 0.79 | 0.0 | 0.05 | 18.79 | 0.01 | 2.078 | 12.10 | 1.79 | 2.8 | 97.2 | 0.0 | 0.86 | 0.91 | 0.79 | 0.82 | 5.23 | 54656 | 5544 | 114 | 0 | 228 | 1236 | 0 | logfile |
✔ | 6ZGL | 11210 | 2022-05-14 | 2020-06-19 | 1.9 | 1.87 | — | 1.9 | 0.013 | 1.55 | 0.0 | 0.12 | 15.52 | 0.01 | 2.196 | 9.41 | 3.73 | 1.1 | 98.9 | 0.0 | 0.13 | 0.73 | 0.83 | 7.03 | 1.9 | 0.003 | 0.56 | 0.0 | 0.04 | 15.75 | 0.00 | 2.118 | 4.99 | 1.00 | 0.6 | 99.4 | 0.0 | 3.59 | 0.75 | 0.76 | 0.83 | 7.07 | 15760 | 1848 | 24 | 0 | 0 | 964 | 0 | logfile |
✔ | 6WWU | 21948 | 2022-05-13 | 2020-05-09 | 2.7 | 2.08 | 2.76 | 1.9 | 0.011 | 1.26 | 1.0 | 0.06 | 16.22 | 0.02 | 2.072 | 6.98 | 2.78 | 5.8 | 94.0 | 0.2 | -3.98 | 0.60 | 0.76 | 4.02 | 1.9 | 0.004 | 0.64 | 0.0 | 0.04 | 17.69 | 0.00 | 1.980 | 7.35 | 2.30 | 3.6 | 96.4 | 0.1 | -0.47 | 0.68 | 0.61 | 0.82 | 4.01 | 9688 | 1216 | 6 | 1 | 4 | 0 | 0 | logfile |
✔ | 7VUH | 32128 | 2022-05-13 | 2021-11-02 | 3.22 | 2.19 | — | 1.9 | 0.003 | 0.64 | 0.0 | 0.04 | 13.57 | 0.00 | 2.099 | 14.21 | 0.00 | 6.2 | 93.8 | 0.0 | -1.87 | 0.71 | 0.69 | 2.81 | 1.9 | 0.004 | 0.65 | 0.0 | 0.04 | 15.83 | 0.01 | 2.007 | 14.34 | 0.33 | 5.5 | 94.5 | 0.0 | -1.24 | 0.38 | 0.71 | 0.72 | 2.33 | 8302 | 1042 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7NJ1 | 12369 | 2022-05-13 | 2021-02-14 | 2.9 | 2.23 | — | 1.9 | 0.005 | 0.70 | 1.0 | 0.05 | 13.54 | 0.00 | 2.211 | 9.26 | 1.09 | 7.4 | 92.4 | 0.2 | -2.39 | 0.75 | 0.73 | 2.14 | 2.0 | 0.004 | 0.77 | 0.0 | 0.04 | 16.50 | 0.01 | 2.140 | 11.45 | 1.91 | 6.1 | 93.8 | 0.1 | 0.70 | 0.57 | 0.77 | 0.76 | 2.04 | 11096 | 1501 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M3N | 23658 | 2022-05-12 | 2021-03-18 | 2.4 | 2.15 | 2.40 | 1.9 | 0.005 | 0.63 | 0.0 | 0.04 | 15.95 | 0.00 | 2.168 | 5.79 | 4.28 | 4.3 | 95.6 | 0.1 | -2.53 | 0.43 | 0.82 | 4.98 | 1.9 | 0.005 | 0.62 | 0.0 | 0.05 | 16.99 | 0.00 | 2.273 | 7.83 | 3.06 | 4.5 | 95.3 | 0.1 | -0.64 | 0.46 | 0.45 | 0.85 | 4.62 | 6004 | 759 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7D1T | 30547 | 2022-05-12 | 2020-09-15 | 1.95 | 1.88 | 1.89 | 1.9 | 0.020 | 1.91 | 31.0 | 0.10 | 18.53 | 0.02 | 1.200 | 3.45 | 2.40 | 1.9 | 97.9 | 0.2 | -0.93 | 0.77 | 0.85 | 6.98 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 52994 | 5312 | 108 | 0 | 196 | 2432 | 0 | logfile |
✘ | 7EFC | 31083 | 2022-05-14 | 2021-03-21 | 1.7 | 1.76 | 1.83 | 1.9 | 0.032 | 3.16 | 80.0 | 0.09 | 15.03 | 0.02 | 0.000 | 3.39 | 2.15 | 2.5 | 96.6 | 0.8 | -0.84 | 0.73 | 0.80 | 6.33 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20020 | 2400 | 20 | 0 | 20 | 780 | 0 | logfile |
✔ | 7o6Q | 12740 | 2022-05-12 | 2021-04-12 | 1.88 | 2.21 | — | 1.9 | 0.010 | 0.71 | 0.0 | 0.05 | 12.80 | 0.01 | 2.115 | 4.83 | 1.25 | 3.2 | 96.8 | 0.0 | -1.61 | 0.88 | 0.85 | 7.59 | 1.9 | 0.002 | 0.47 | 0.0 | 0.04 | 14.46 | 0.00 | 2.188 | 5.16 | 1.63 | 0.8 | 99.2 | 0.0 | 3.35 | 0.36 | 0.90 | 0.90 | 6.06 | 7999 | 997 | 8 | 0 | 0 | 399 | 0 | logfile |
✔ | 7N1U | 24123 | 2022-05-15 | 2021-05-28 | 3.14 | 2.62 | — | 1.9 | 0.013 | 1.75 | 7.0 | 0.13 | 14.19 | 0.01 | 2.003 | 6.76 | 1.56 | 6.1 | 93.7 | 0.3 | -1.65 | 0.83 | 0.80 | 3.13 | 1.9 | 0.004 | 0.76 | 0.0 | 0.05 | 15.84 | 0.01 | 2.016 | 11.63 | 0.25 | 4.0 | 96.0 | 0.0 | -0.09 | 0.66 | 0.84 | 0.83 | 2.29 | 26619 | 3225 | 39 | 0 | 99 | 0 | 0 | logfile |