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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7SRQ | 25401 | 2023-09-27 | 2021-11-08 | 2.7 | 2.17 | — | 1.9 | 0.008 | 0.80 | 0.0 | 0.05 | 13.54 | 0.01 | 2.296 | 8.67 | 1.50 | 2.8 | 97.2 | 0.0 | 0.29 | 0.70 | 0.72 | 4.55 | 2.7 | 0.004 | 0.76 | 0.0 | 0.04 | 15.44 | 0.00 | 2.264 | 8.93 | 3.50 | 3.2 | 96.8 | 0.0 | 0.20 | 0.48 | 0.72 | 0.77 | 3.78 | 1960 | 254 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 8E9W | 27966 | 2023-09-29 | 2022-08-27 | 2.69 | 2.11 | 2.70 | 1.9 | 0.004 | 0.67 | 0.0 | 0.04 | 12.89 | 0.00 | 2.210 | 7.31 | 0.11 | 2.9 | 97.1 | 0.0 | 0.23 | 0.78 | 0.78 | 3.54 | 1.9 | 0.003 | 0.54 | 0.0 | 0.04 | 15.58 | 0.00 | 2.160 | 7.61 | 1.60 | 2.8 | 97.2 | 0.0 | 0.74 | 0.35 | 0.80 | 0.81 | 2.82 | 8529 | 1123 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8F0J | 28758 | 2023-09-29 | 2022-11-03 | 2.0 | 1.77 | 1.94 | 1.9 | 0.005 | 0.61 | 1.0 | 0.05 | 14.78 | 0.00 | 2.246 | 4.03 | 0.40 | 1.1 | 98.9 | 0.0 | -1.49 | 0.53 | 0.75 | 5.18 | 1.9 | 0.004 | 0.67 | 0.0 | 0.04 | 16.94 | 0.00 | 2.177 | 6.87 | 1.01 | 2.5 | 97.5 | 0.0 | 1.37 | 0.83 | 0.54 | 0.78 | 5.63 | 9678 | 1157 | 11 | 0 | 18 | 25 | 0 | logfile |
✔ | 7VZ4 | 32220 | 2023-09-30 | 2021-11-15 | 1.89 | 1.72 | — | 1.9 | 0.010 | 1.17 | 0.0 | 0.08 | 29.00 | 0.00 | 2.167 | 2.63 | 0.97 | 1.6 | 98.4 | 0.0 | 0.11 | 0.75 | 0.82 | 7.08 | 1.9 | 0.005 | 0.70 | 0.0 | 0.04 | 28.42 | 0.01 | 2.320 | 4.08 | 0.49 | 0.5 | 99.5 | 0.0 | 2.76 | 0.80 | 0.78 | 0.86 | 7.64 | 11843 | 746 | 10 | 290 | 0 | 0 | 0 | logfile |
✔ | 8E9Y | 27968 | 2023-09-29 | 2022-08-27 | 2.79 | 2.12 | 2.79 | 1.9 | 0.005 | 0.81 | 0.0 | 0.05 | 13.31 | 0.00 | 2.217 | 12.62 | 0.12 | 5.2 | 94.8 | 0.0 | -1.06 | 0.76 | 0.75 | 3.19 | 1.9 | 0.003 | 0.59 | 0.0 | 0.04 | 15.56 | 0.00 | 2.203 | 9.72 | 1.73 | 4.1 | 95.8 | 0.1 | -0.25 | 0.36 | 0.76 | 0.76 | 2.63 | 8479 | 1123 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8FN1 | 29303 | 2023-09-29 | 2022-12-26 | 2.88 | 2.15 | 2.86 | 1.9 | 0.004 | 0.59 | 0.0 | 0.06 | 9.15 | 0.00 | 2.173 | 7.25 | 0.23 | 2.5 | 97.5 | 0.0 | 1.17 | 0.78 | 0.79 | 4.36 | 1.9 | 0.003 | 0.55 | 0.0 | 0.04 | 13.02 | 0.00 | 2.229 | 6.89 | 2.04 | 3.0 | 97.0 | 0.0 | 1.47 | 0.47 | 0.78 | 0.80 | 3.87 | 8444 | 1116 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DZP | 27804 | 2023-09-29 | 2022-08-08 | 2.71 | 2.09 | 2.70 | 1.9 | 0.019 | 0.72 | 0.0 | 0.10 | 13.82 | 0.01 | 2.216 | 5.26 | 0.11 | 3.6 | 96.4 | 0.0 | -0.46 | 0.78 | 0.78 | 3.63 | 1.9 | 0.004 | 0.63 | 0.0 | 0.04 | 15.60 | 0.00 | 2.114 | 8.35 | 0.96 | 4.1 | 95.9 | 0.0 | 0.52 | 0.33 | 0.80 | 0.82 | 3.38 | 8657 | 1120 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8oRM | 17129 | 2023-09-28 | 2023-04-14 | 1.9 | 1.83 | 1.88 | 1.9 | 0.004 | 0.58 | 0.0 | 0.04 | 16.77 | 0.00 | 2.236 | 3.99 | 0.90 | 1.6 | 98.2 | 0.2 | 1.88 | 0.70 | 0.81 | 5.96 | 1.9 | 0.005 | 0.69 | 0.0 | 0.05 | 16.78 | 0.01 | 2.187 | 6.14 | 1.08 | 1.5 | 98.4 | 0.2 | 1.36 | 0.18 | 0.70 | 0.83 | 5.92 | 5341 | 632 | 7 | 0 | 2 | 210 | 0 | logfile |
✔ | 8P6Y | 17511 | 2023-09-28 | 2023-05-30 | 1.9 | 1.73 | 1.95 | 1.9 | 0.005 | 0.60 | 0.0 | 0.04 | 16.82 | 0.00 | 2.148 | 3.62 | 0.36 | 1.0 | 98.9 | 0.2 | 1.99 | 0.68 | 0.84 | 6.33 | 1.9 | 0.004 | 0.63 | 0.0 | 0.04 | 16.85 | 0.00 | 2.148 | 4.60 | 0.90 | 1.3 | 98.5 | 0.2 | 1.74 | 0.21 | 0.68 | 0.85 | 6.33 | 5266 | 630 | 7 | 0 | 3 | 158 | 0 | logfile |
✔ | 7NJ1 | 12369 | 2023-09-30 | 2021-02-14 | 2.9 | 2.23 | — | 1.9 | 0.005 | 0.70 | 1.0 | 0.05 | 13.54 | 0.00 | 2.211 | 9.26 | 1.09 | 7.4 | 92.4 | 0.2 | -2.39 | 0.75 | 0.73 | 2.14 | 1.9 | 0.004 | 0.76 | 0.0 | 0.04 | 16.51 | 0.00 | 2.141 | 11.13 | 1.36 | 6.1 | 93.7 | 0.1 | 0.95 | 0.58 | 0.77 | 0.76 | 1.93 | 11096 | 1501 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XWo | 33497 | 2023-09-29 | 2022-05-26 | 2.7 | 2.15 | 2.94 | 1.9 | 0.007 | 0.87 | 0.0 | 0.06 | 13.89 | 0.01 | 2.275 | 4.65 | 0.22 | 5.7 | 94.3 | 0.0 | -4.88 | 0.76 | 0.76 | 3.57 | 2.0 | 0.002 | 0.64 | 0.0 | 0.04 | 15.98 | 0.00 | 2.057 | 10.75 | 3.16 | 3.0 | 97.0 | 0.0 | -0.86 | 0.46 | 0.77 | 0.78 | 2.53 | 8725 | 1131 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8E9X | 27967 | 2023-09-29 | 2022-08-27 | 2.7 | 2.10 | 2.72 | 1.9 | 0.004 | 0.60 | 0.0 | 0.04 | 12.62 | 0.00 | 2.200 | 6.28 | 0.00 | 4.2 | 95.8 | 0.0 | -0.15 | 0.78 | 0.79 | 3.99 | 1.9 | 0.004 | 0.56 | 0.0 | 0.04 | 15.26 | 0.00 | 2.233 | 7.19 | 1.61 | 3.8 | 96.2 | 0.0 | 0.55 | 0.34 | 0.80 | 0.82 | 3.68 | 8380 | 1109 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7UWL | 26835 | 2023-09-30 | 2022-05-03 | 3.7 | 2.40 | 3.59 | 1.9 | 0.005 | 0.78 | 1.0 | 0.05 | 16.04 | 0.00 | 2.137 | 15.51 | 0.63 | 7.1 | 92.9 | 0.0 | -1.39 | 0.68 | 0.64 | 1.65 | 1.7 | 0.004 | 0.80 | 0.0 | 0.05 | 16.76 | 0.01 | 2.078 | 15.76 | 0.63 | 8.1 | 91.9 | 0.0 | -1.62 | 0.45 | 0.69 | 0.66 | 1.57 | 10100 | 1236 | 16 | 0 | 22 | 0 | 0 | logfile |
✔ | 7RCV | 24407 | 2023-09-28 | 2021-07-08 | 2.01 | 1.78 | — | 1.9 | 0.024 | 2.38 | 0.0 | 0.11 | 20.31 | 0.01 | 1.915 | 13.94 | 1.99 | 2.6 | 97.4 | 0.0 | 0.92 | 0.78 | 0.79 | 5.10 | 1.9 | 0.007 | 0.98 | 0.0 | 0.06 | 19.24 | 0.01 | 1.984 | 13.17 | 1.79 | 3.0 | 97.0 | 0.0 | 0.41 | 0.91 | 0.81 | 0.84 | 5.30 | 54656 | 5544 | 114 | 0 | 228 | 1236 | 0 | logfile |
✔ | 8Q9F | 18279 | 2023-09-28 | 2023-08-20 | 1.91 | 1.89 | 1.88 | 1.9 | 0.011 | 1.78 | 0.0 | 0.09 | 10.30 | 0.01 | 2.515 | 0.00 | 0.00 | 0.2 | 99.8 | 0.0 | -2.15 | 0.31 | 0.73 | 7.64 | 1.9 | 0.003 | 0.64 | 0.0 | 0.05 | 15.99 | 0.00 | 2.249 | 3.13 | 0.00 | 2.5 | 97.5 | 0.0 | -2.11 | 1.84 | 0.44 | 0.86 | 7.01 | 6390 | 414 | 6 | 0 | 0 | 0 | 3258 | logfile |
✔ | 8P6V | 17508 | 2023-09-28 | 2023-05-30 | 1.9 | 1.76 | 1.97 | 1.9 | 0.005 | 0.62 | 0.0 | 0.04 | 16.21 | 0.00 | 2.221 | 5.67 | 1.26 | 1.8 | 98.1 | 0.2 | 1.53 | 0.64 | 0.77 | 5.52 | 1.9 | 0.003 | 0.57 | 0.0 | 0.04 | 16.68 | 0.00 | 2.124 | 5.67 | 2.17 | 1.6 | 98.2 | 0.2 | 1.30 | 0.75 | 0.64 | 0.78 | 5.35 | 5243 | 630 | 7 | 0 | 2 | 138 | 0 | logfile |
✔ | 8E9Z | 27969 | 2023-09-29 | 2022-08-27 | 2.69 | 2.09 | 2.64 | 1.9 | 0.004 | 0.80 | 2.0 | 0.05 | 15.12 | 0.01 | 2.248 | 9.60 | 0.34 | 3.2 | 96.8 | 0.0 | -1.79 | 0.79 | 0.79 | 2.55 | 1.9 | 0.003 | 0.57 | 0.0 | 0.04 | 16.07 | 0.00 | 1.969 | 7.33 | 1.49 | 3.2 | 96.8 | 0.0 | 0.95 | 0.35 | 0.79 | 0.80 | 3.01 | 8566 | 1129 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 7SQG | 25384 | 2023-09-28 | 2021-11-05 | 2.6 | 2.14 | — | 1.9 | 0.004 | 0.60 | 0.0 | 0.05 | 13.94 | 0.00 | 2.423 | 3.35 | 0.00 | 3.0 | 97.0 | 0.0 | 1.39 | 0.75 | 0.77 | 3.39 | 1.8 | 0.006 | 0.65 | 0.0 | 0.05 | 18.17 | 0.00 | 2.082 | 8.84 | 1.74 | 3.9 | 96.1 | 0.0 | 1.31 | 0.97 | 0.81 | 0.83 | 3.63 | 6630 | 810 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 7EFC | 31083 | 2023-09-27 | 2021-03-21 | 1.7 | 1.76 | 1.76 | 1.9 | 0.032 | 3.16 | 16.0 | 0.09 | 15.03 | 0.02 | 0.001 | 2.15 | 2.15 | 2.5 | 96.6 | 0.8 | -0.84 | 0.75 | 0.84 | 6.42 | 1.9 | 0.003 | 0.69 | 0.0 | 0.04 | 14.60 | 0.00 | 1.907 | 5.77 | 0.54 | 2.5 | 97.5 | 0.0 | 0.68 | 0.91 | 0.80 | 0.85 | 5.94 | 4004 | 480 | 4 | 0 | 4 | 156 | 0 | logfile |
✔ | 7VUH | 32128 | 2023-09-29 | 2021-11-02 | 3.22 | 2.19 | — | 1.9 | 0.004 | 0.66 | 0.0 | 0.04 | 13.59 | 0.00 | 2.099 | 13.73 | 0.00 | 6.2 | 93.8 | 0.0 | -1.87 | 0.71 | 0.69 | 2.81 | 1.4 | 0.005 | 0.70 | 0.0 | 0.04 | 15.83 | 0.00 | 2.031 | 14.94 | 0.11 | 6.0 | 94.0 | 0.0 | -1.28 | 0.38 | 0.72 | 0.73 | 2.42 | 8302 | 1042 | 5 | 0 | 1 | 0 | 0 | logfile |