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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7NJ1 | 12369 | 2023-04-22 | 2021-02-14 | 2.9 | 2.23 | — | 1.9 | 0.005 | 0.70 | 1.0 | 0.05 | 13.54 | 0.00 | 2.211 | 9.26 | 1.09 | 7.4 | 92.4 | 0.2 | -2.39 | 0.75 | 0.73 | 2.14 | 1.9 | 0.004 | 0.76 | 0.0 | 0.04 | 16.51 | 0.00 | 2.141 | 11.13 | 1.36 | 6.1 | 93.7 | 0.1 | 0.95 | 0.58 | 0.77 | 0.76 | 1.93 | 11096 | 1501 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EFD | 31084 | 2023-04-20 | 2021-03-21 | 1.77 | 1.78 | 1.82 | 1.9 | 0.033 | 3.16 | 12.0 | 0.09 | 15.47 | 0.02 | 0.001 | 1.61 | 2.15 | 1.7 | 97.5 | 0.8 | -0.54 | 0.74 | 0.82 | 5.75 | 1.9 | 0.004 | 0.74 | 0.0 | 0.05 | 14.91 | 0.00 | 1.834 | 7.38 | 0.00 | 3.4 | 96.0 | 0.6 | 0.90 | 0.55 | 0.80 | 0.84 | 6.49 | 4004 | 480 | 4 | 0 | 4 | 156 | 0 | logfile |
✔ | 7VUH | 32128 | 2023-04-21 | 2021-11-02 | 3.22 | 2.19 | — | 1.9 | 0.004 | 0.66 | 0.0 | 0.04 | 13.59 | 0.00 | 2.099 | 13.73 | 0.00 | 6.2 | 93.8 | 0.0 | -1.87 | 0.71 | 0.69 | 2.81 | 1.4 | 0.005 | 0.70 | 0.0 | 0.04 | 15.83 | 0.00 | 2.031 | 14.94 | 0.11 | 6.0 | 94.0 | 0.0 | -1.28 | 0.38 | 0.72 | 0.73 | 2.42 | 8302 | 1042 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7USL | 26738 | 2023-04-28 | 2022-04-25 | 2.7 | 2.28 | — | 1.9 | 0.004 | 0.61 | 0.0 | 0.05 | 13.68 | 0.00 | 2.106 | 5.30 | 0.00 | 3.2 | 96.8 | 0.0 | -0.47 | 0.75 | 0.73 | 3.51 | 1.9 | 0.006 | 0.73 | 0.0 | 0.05 | 16.01 | 0.01 | 2.094 | 7.90 | 2.39 | 4.5 | 95.5 | 0.0 | -0.76 | 0.37 | 0.78 | 0.78 | 3.09 | 19065 | 2464 | 10 | 0 | 49 | 0 | 0 | logfile |
✔ | 7T6U | 25728 | 2023-04-21 | 2021-12-14 | 2.9 | 2.23 | — | 1.9 | 0.006 | 1.00 | 4.0 | 0.06 | 12.93 | 0.01 | 2.315 | 3.49 | 0.31 | 2.0 | 98.0 | 0.0 | -3.84 | 0.76 | 0.78 | 4.04 | 2.0 | 0.004 | 0.66 | 0.0 | 0.04 | 16.06 | 0.00 | 2.121 | 9.58 | 2.24 | 2.2 | 97.8 | 0.0 | 0.27 | 1.20 | 0.79 | 0.81 | 3.37 | 9033 | 1152 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8AG5 | 15416 | 2023-04-23 | 2022-07-19 | 3.47 | 2.11 | — | 1.9 | 0.003 | 0.49 | 0.0 | 0.04 | 17.82 | 0.00 | 2.194 | 6.46 | 0.26 | 3.8 | 96.2 | 0.0 | 0.35 | 0.75 | 0.75 | 3.20 | 1.9 | 0.002 | 0.51 | 0.0 | 0.04 | 17.77 | 0.00 | 2.178 | 6.94 | 0.45 | 3.7 | 96.3 | 0.0 | 0.53 | 0.87 | 0.76 | 0.78 | 2.90 | 13762 | 1703 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UM5 | 26597 | 2023-04-20 | 2022-04-06 | 2.73 | 2.12 | 2.75 | 1.9 | 0.003 | 0.57 | 0.0 | 0.04 | 11.84 | 0.00 | 2.281 | 2.29 | 0.00 | 3.8 | 96.2 | 0.0 | -0.74 | 0.82 | 0.82 | 4.55 | 1.9 | 0.003 | 0.61 | 0.0 | 0.04 | 14.14 | 0.00 | 2.252 | 3.96 | 1.06 | 4.1 | 95.9 | 0.0 | 0.30 | 0.34 | 0.83 | 0.83 | 3.86 | 8277 | 1104 | 6 | 0 | 1 | 1 | 0 | logfile |
✔ | 7N8o | 24239 | 2023-04-20 | 2021-06-15 | 1.93 | 1.73 | — | 1.9 | 0.025 | 2.40 | 0.0 | 0.11 | 20.28 | 0.01 | 1.522 | 14.77 | 1.91 | 3.0 | 96.9 | 0.1 | 0.75 | 0.73 | 0.75 | 5.48 | 1.8 | 0.004 | 0.81 | 0.0 | 0.05 | 18.74 | 0.01 | 2.000 | 12.74 | 1.66 | 3.0 | 97.0 | 0.0 | 0.83 | 0.34 | 0.77 | 0.80 | 5.41 | 54656 | 5544 | 113 | 0 | 228 | 1236 | 0 | logfile |
✔ | 8E9X | 27967 | 2023-04-20 | 2022-08-27 | 2.7 | 2.10 | 2.72 | 1.9 | 0.004 | 0.60 | 0.0 | 0.04 | 12.62 | 0.00 | 2.200 | 6.28 | 0.00 | 4.2 | 95.8 | 0.0 | -0.15 | 0.78 | 0.79 | 3.99 | 1.9 | 0.004 | 0.56 | 0.0 | 0.04 | 15.26 | 0.00 | 2.233 | 7.19 | 1.61 | 3.8 | 96.2 | 0.0 | 0.55 | 0.34 | 0.80 | 0.82 | 3.68 | 8380 | 1109 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8E9Y | 27968 | 2023-04-20 | 2022-08-27 | 2.79 | 2.12 | 2.79 | 1.9 | 0.005 | 0.81 | 0.0 | 0.05 | 13.31 | 0.00 | 2.217 | 12.62 | 0.12 | 5.2 | 94.8 | 0.0 | -1.06 | 0.76 | 0.75 | 3.19 | 1.9 | 0.003 | 0.59 | 0.0 | 0.04 | 15.56 | 0.00 | 2.203 | 9.72 | 1.73 | 4.1 | 95.8 | 0.1 | -0.25 | 0.36 | 0.76 | 0.76 | 2.63 | 8479 | 1123 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7UM6 | 26598 | 2023-04-20 | 2022-04-06 | 2.79 | 2.13 | 2.81 | 1.9 | 0.012 | 0.64 | 0.0 | 0.04 | 11.16 | 0.00 | 2.359 | 2.38 | 0.12 | 3.8 | 96.2 | 0.0 | -0.54 | 0.82 | 0.81 | 4.30 | 2.0 | 0.003 | 0.61 | 0.0 | 0.04 | 14.17 | 0.00 | 2.248 | 4.01 | 1.81 | 2.8 | 97.2 | 0.0 | 0.66 | 0.38 | 0.83 | 0.83 | 3.39 | 8175 | 1094 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8E9W | 27966 | 2023-04-20 | 2022-08-27 | 2.69 | 2.11 | 2.70 | 1.9 | 0.004 | 0.67 | 0.0 | 0.04 | 12.89 | 0.00 | 2.210 | 7.31 | 0.11 | 2.9 | 97.1 | 0.0 | 0.23 | 0.78 | 0.78 | 3.54 | 1.9 | 0.003 | 0.54 | 0.0 | 0.04 | 15.58 | 0.00 | 2.160 | 7.61 | 1.60 | 2.8 | 97.2 | 0.0 | 0.74 | 0.35 | 0.80 | 0.81 | 2.82 | 8529 | 1123 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7WiC | 32528 | 2023-04-21 | 2022-01-03 | 2.8 | 2.21 | — | 1.9 | 0.005 | 0.62 | 0.0 | 0.05 | 12.93 | 0.00 | 2.176 | 7.87 | 0.00 | 2.7 | 97.3 | 0.0 | 0.61 | 0.76 | 0.76 | 3.53 | 1.9 | 0.003 | 0.58 | 0.0 | 0.04 | 15.57 | 0.00 | 2.173 | 7.26 | 1.11 | 3.1 | 96.9 | 0.0 | 1.17 | 0.37 | 0.78 | 0.80 | 3.11 | 9048 | 1158 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8E9Z | 27969 | 2023-04-20 | 2022-08-27 | 2.69 | 2.09 | 2.64 | 1.9 | 0.004 | 0.80 | 2.0 | 0.05 | 15.12 | 0.01 | 2.248 | 9.60 | 0.34 | 3.2 | 96.8 | 0.0 | -1.79 | 0.79 | 0.79 | 2.55 | 1.9 | 0.003 | 0.57 | 0.0 | 0.04 | 16.07 | 0.00 | 1.969 | 7.33 | 1.49 | 3.2 | 96.8 | 0.0 | 0.95 | 0.35 | 0.79 | 0.80 | 3.01 | 8566 | 1129 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 6ZGL | 11210 | 2023-04-23 | 2020-06-19 | 1.9 | 1.87 | — | 1.9 | 0.013 | 1.55 | 0.0 | 0.12 | 15.52 | 0.01 | 2.196 | 9.00 | 3.73 | 1.1 | 98.9 | 0.0 | 0.13 | 0.73 | 0.83 | 7.03 | 1.9 | 0.003 | 0.52 | 0.0 | 0.04 | 15.83 | 0.00 | 2.114 | 4.28 | 0.93 | 0.9 | 99.1 | 0.0 | 3.77 | 0.76 | 0.75 | 0.83 | 7.09 | 15760 | 1848 | 24 | 0 | 0 | 964 | 0 | logfile |
✔ | 7o6Q | 12740 | 2023-04-20 | 2021-04-12 | 1.88 | 2.21 | — | 1.9 | 0.010 | 0.71 | 0.0 | 0.05 | 12.80 | 0.01 | 2.115 | 4.83 | 1.25 | 3.2 | 96.8 | 0.0 | -1.61 | 0.88 | 0.85 | 7.59 | 1.9 | 0.002 | 0.47 | 0.0 | 0.04 | 14.51 | 0.00 | 2.189 | 4.70 | 1.63 | 0.8 | 99.2 | 0.0 | 3.42 | 0.36 | 0.90 | 0.90 | 6.06 | 7999 | 997 | 8 | 0 | 0 | 399 | 0 | logfile |
✔ | 7S8o | 24899 | 2023-04-20 | 2021-09-18 | 2.58 | 2.12 | 2.59 | 1.9 | 0.007 | 0.72 | 0.0 | 0.05 | 13.18 | 0.00 | 2.102 | 3.18 | 0.00 | 5.8 | 94.2 | 0.0 | 0.31 | 0.81 | 0.80 | 4.50 | 1.9 | 0.002 | 0.53 | 0.0 | 0.04 | 15.63 | 0.00 | 2.207 | 3.18 | 0.92 | 4.4 | 95.6 | 0.0 | 1.05 | 0.40 | 0.83 | 0.83 | 3.24 | 8331 | 1101 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7UM7 | 26599 | 2023-04-20 | 2022-04-06 | 2.75 | 2.13 | 2.74 | 1.9 | 0.002 | 0.48 | 0.0 | 0.04 | 12.58 | 0.01 | 2.220 | 2.88 | 0.00 | 2.8 | 97.2 | 0.0 | -0.25 | 0.81 | 0.80 | 4.23 | 1.9 | 0.005 | 0.64 | 0.0 | 0.04 | 15.12 | 0.00 | 2.206 | 3.51 | 1.68 | 4.1 | 95.9 | 0.0 | 0.51 | 0.97 | 0.83 | 0.83 | 4.04 | 8165 | 1089 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7XBK | 33104 | 2023-04-27 | 2022-03-21 | 3.7 | 2.43 | 3.78 | 1.9 | 0.005 | 0.86 | 0.0 | 0.05 | 15.01 | 0.01 | 2.095 | 5.74 | 0.00 | 2.9 | 97.0 | 0.0 | -1.71 | 0.69 | 0.63 | 1.49 | 1.9 | 0.004 | 0.74 | 0.0 | 0.05 | 17.64 | 0.00 | 1.818 | 17.19 | 0.59 | 2.4 | 97.6 | 0.0 | 0.15 | 0.72 | 0.69 | 0.69 | 1.64 | 25745 | 3139 | 19 | 0 | 33 | 0 | 0 | logfile |
✔ | 7SRQ | 25401 | 2023-04-20 | 2021-11-08 | 2.7 | 2.17 | — | 1.9 | 0.008 | 0.80 | 0.0 | 0.05 | 13.54 | 0.01 | 2.296 | 8.67 | 1.50 | 2.8 | 97.2 | 0.0 | 0.29 | 0.70 | 0.72 | 4.55 | 2.7 | 0.004 | 0.76 | 0.0 | 0.04 | 15.44 | 0.00 | 2.264 | 8.93 | 3.50 | 3.2 | 96.8 | 0.0 | 0.20 | 0.48 | 0.72 | 0.77 | 3.78 | 1960 | 254 | 1 | 0 | 2 | 0 | 0 | logfile |