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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7UMH | 26601 | 2024-03-19 | 2022-04-07 | 2.6 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 140516 | 12747 | 124 | 0 | 798 | 461 | 0 | logfile |
✘ | 8DK5 | 27483 | 2024-03-16 | 2022-07-02 | 2.71 | 3.29 | 2.87 | 3.2 | 0.011 | 1.11 | 3.0 | 0.07 | 27.41 | 0.01 | 2.088 | 9.15 | 0.39 | 4.6 | 95.3 | 0.2 | -0.97 | 0.74 | 0.79 | 3.50 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15618 | 1210 | 12 | 298 | 0 | 0 | 0 | logfile |
✘ | 6YBA | 10768 | 2024-03-20 | 2020-03-16 | 4.0 | 4.06 | — | 4.0 | 0.007 | 1.21 | 0.0 | 0.06 | 11.33 | 0.01 | 2.216 | 8.73 | 0.60 | 14.7 | 85.2 | 0.1 | -4.78 | 0.43 | 0.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 98037 | 12388 | 26 | 0 | 0 | 0 | 0 | logfile |
✘ | 8EKW | 28214 | 2024-03-20 | 2022-09-22 | 2.83 | 3.09 | 2.98 | 3.1 | 0.006 | 0.66 | 3.0 | 0.05 | 13.69 | 0.01 | 2.207 | 4.83 | 0.26 | 3.2 | 96.8 | 0.0 | 0.13 | 0.70 | 0.82 | 4.31 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14552 | 1760 | 20 | 0 | 0 | 402 | 0 | logfile |
✘ | 8FC8 | 28976 | 2024-03-24 | 2022-12-01 | 3.47 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 39152 | 2468 | 8 | 0 | 8 | 0 | 19384 | logfile |
✘ | 7XF2 | 33168 | 2024-03-11 | 2022-03-31 | 3.73 | 4.88 | 3.77 | 3.9 | 0.004 | 0.65 | 0.0 | 0.04 | 14.12 | 0.00 | 2.133 | 14.17 | 0.13 | 8.5 | 91.5 | 0.0 | -4.97 | 0.46 | 0.78 | 0.88 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6591 | 840 | 2 | 0 | 0 | 0 | 0 | logfile |
✘ | 8SXA | 40829 | 2024-03-17 | 2023-05-20 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18596 | 1153 | 1 | 0 | 0 | 0 | 9418 | logfile |
✘ | 7YMM | 33933 | 2024-03-17 | 2022-07-28 | 3.6 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 136856 | 13220 | 120 | 0 | 788 | 0 | 0 | logfile |
✘ | 8oPM | 17076 | 2024-03-21 | 2023-04-07 | 3.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29802 | 3582 | 42 | 0 | 123 | 0 | 0 | logfile |
✘ | 8BPB | 16148 | 2024-03-11 | 2022-11-16 | 2.8 | 2.48 | 3.00 | 2.8 | 0.004 | 0.61 | 0.0 | 0.04 | 17.77 | 0.00 | 1.755 | 8.92 | 2.96 | 2.5 | 97.5 | 0.0 | 0.64 | 0.74 | 0.80 | 2.51 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8384 | 1030 | 7 | 0 | 6 | 12 | 0 | logfile |
✘ | 8PSJ | 17853 | 2024-03-21 | 2023-07-13 | 3.4 | 3.41 | 3.38 | 3.3 | 0.014 | 1.91 | 0.0 | 0.09 | 14.92 | 0.01 | 2.072 | 5.29 | 0.62 | 7.7 | 92.0 | 0.3 | -3.68 | 0.72 | 0.86 | 2.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29695 | 3788 | 5 | 0 | 2 | 0 | 0 | logfile |
✘ | 8BVH | 16264 | 2024-03-23 | 2022-12-03 | 3.6 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 38135 | 2256 | 23 | 41 | 8 | 0 | 18879 | logfile |
✘ | 8JZR | 36751 | 2024-03-10 | 2023-07-06 | 3.25 | 3.52 | 3.29 | 3.5 | 0.007 | 0.77 | 0.0 | 0.05 | 12.74 | 0.01 | 2.381 | 4.82 | 0.00 | 3.8 | 95.7 | 0.4 | 0.75 | 0.64 | 0.79 | 2.96 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3474 | 456 | 2 | 0 | 1 | 0 | 0 | logfile |
✘ | 7Y7B | 33659 | 2024-03-11 | 2022-06-22 | 2.66 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 60515 | 5082 | 55 | 0 | 562 | 0 | 0 | logfile |
✘ | 8SL0 | 40570 | 2024-03-10 | 2023-04-20 | 3.3 | 4.17 | 3.09 | 3.8 | 0.003 | 0.62 | 0.0 | 0.05 | 16.00 | 0.00 | 2.201 | 7.96 | 0.00 | 8.4 | 91.2 | 0.4 | -1.67 | 0.42 | 0.83 | 1.40 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 1737 | 228 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 8T6J | 41069 | 2024-03-15 | 2023-06-16 | 3.5 | 3.65 | — | 3.5 | 0.003 | 0.60 | 0.0 | 0.04 | 13.75 | 0.00 | 2.196 | 6.10 | 0.00 | 5.1 | 94.9 | 0.0 | 0.00 | 0.80 | 0.79 | 1.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11652 | 1534 | 4 | 0 | 2 | 0 | 0 | logfile |
✘ | 8oPo | 17078 | 2024-03-21 | 2023-04-07 | 3.6 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 28965 | 3585 | 18 | 0 | 57 | 0 | 0 | logfile |
✘ | 8SA2 | 40262 | 2024-03-14 | 2023-03-31 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9268 | 0 | 4 | 420 | 2 | 0 | 0 | logfile |
✘ | 8FD6 | 29003 | 2024-03-18 | 2022-12-02 | 2.9 | 3.18 | 2.95 | 3.2 | 0.007 | 0.74 | 0.0 | 0.05 | 14.43 | 0.00 | 1.835 | 8.75 | 0.16 | 3.8 | 96.2 | 0.0 | 0.39 | 0.64 | 0.73 | 2.61 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22170 | 2747 | 1 | 0 | 6 | 0 | 0 | logfile |
✘ | 6TU7 | 10590 | 2024-03-19 | 2020-01-03 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |