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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8i79 | 35212 | 2024-03-19 | 2023-01-31 | 2.8 | 3.87 | 3.00 | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 12.36 | 0.00 | 2.195 | 8.33 | 0.00 | 3.0 | 97.0 | 0.0 | 1.30 | 0.88 | 0.84 | 3.65 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16293 | 2198 | 10 | 0 | 0 | 0 | 0 | logfile |
✘ | 6YBA | 10768 | 2024-03-20 | 2020-03-16 | 4.0 | 4.06 | — | 4.0 | 0.007 | 1.21 | 0.0 | 0.06 | 11.33 | 0.01 | 2.216 | 8.73 | 0.60 | 14.7 | 85.2 | 0.1 | -4.78 | 0.43 | 0.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 98037 | 12388 | 26 | 0 | 0 | 0 | 0 | logfile |
✘ | 8T6J | 41069 | 2024-03-15 | 2023-06-16 | 3.5 | 3.65 | — | 3.5 | 0.003 | 0.60 | 0.0 | 0.04 | 13.75 | 0.00 | 2.196 | 6.10 | 0.00 | 5.1 | 94.9 | 0.0 | 0.00 | 0.80 | 0.79 | 1.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11652 | 1534 | 4 | 0 | 2 | 0 | 0 | logfile |
✘ | 7YCA | 33737 | 2024-03-12 | 2022-07-01 | 2.94 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 64832 | 5632 | 60 | 0 | 450 | 4 | 0 | logfile |
✘ | 7WT7 | 32770 | 2024-03-20 | 2022-02-04 | 3.4 | 3.87 | — | 3.8 | 0.005 | 0.92 | 15.0 | 0.06 | 14.36 | 0.01 | 2.132 | 9.81 | 0.91 | 7.1 | 92.6 | 0.3 | -1.79 | 0.78 | 0.77 | 1.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 28322 | 3523 | 12 | 0 | 50 | 0 | 0 | logfile |
✘ | 8HG5 | 34735 | 2024-03-11 | 2022-11-13 | 2.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7794 | 627 | 6 | 0 | 64 | 0 | 0 | logfile |
✘ | 8JZR | 36751 | 2024-03-10 | 2023-07-06 | 3.25 | 3.52 | 3.29 | 3.5 | 0.007 | 0.77 | 0.0 | 0.05 | 12.74 | 0.01 | 2.381 | 4.82 | 0.00 | 3.8 | 95.7 | 0.4 | 0.75 | 0.64 | 0.79 | 2.96 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3474 | 456 | 2 | 0 | 1 | 0 | 0 | logfile |
✘ | 8HG3 | 34733 | 2024-03-11 | 2022-11-13 | 2.94 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7456 | 604 | 6 | 0 | 62 | 0 | 0 | logfile |
✘ | 8GFA | 29983 | 2024-03-24 | 2023-03-07 | 2.29 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 36679 | 2124 | 12 | 0 | 46 | 105 | 17380 | logfile |
✘ | 8DK5 | 27483 | 2024-03-16 | 2022-07-02 | 2.71 | 3.29 | 2.87 | 3.2 | 0.011 | 1.11 | 3.0 | 0.07 | 27.41 | 0.01 | 2.088 | 9.15 | 0.39 | 4.6 | 95.3 | 0.2 | -0.97 | 0.74 | 0.79 | 3.50 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15618 | 1210 | 12 | 298 | 0 | 0 | 0 | logfile |
✘ | 7R42 | 14256 | 2024-03-15 | 2022-02-08 | 2.3 | 2.33 | — | 2.3 | 0.008 | 0.85 | 0.0 | 0.84 | 18.39 | 0.01 | 1.921 | 3.20 | 1.23 | 2.6 | 97.4 | 0.0 | 0.55 | 0.71 | 0.90 | 5.95 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 69480 | 8204 | 114 | 0 | 58 | 1545 | 0 | logfile |
✘ | 8C4T | 16428 | 2024-03-15 | 2023-01-04 | 3.23 | 3.32 | 3.18 | 3.3 | 0.003 | 0.58 | 2.0 | 0.05 | 16.97 | 0.00 | 2.148 | 8.51 | 0.36 | 2.9 | 97.1 | 0.0 | 0.76 | 0.79 | 0.84 | 2.89 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10459 | 1268 | 3 | 12 | 1 | 0 | 0 | logfile |
✘ | 8BPB | 16148 | 2024-03-11 | 2022-11-16 | 2.8 | 2.48 | 3.00 | 2.8 | 0.004 | 0.61 | 0.0 | 0.04 | 17.77 | 0.00 | 1.755 | 8.92 | 2.96 | 2.5 | 97.5 | 0.0 | 0.64 | 0.74 | 0.80 | 2.51 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8384 | 1030 | 7 | 0 | 6 | 12 | 0 | logfile |
✘ | 8FC8 | 28976 | 2024-03-24 | 2022-12-01 | 3.47 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 39152 | 2468 | 8 | 0 | 8 | 0 | 19384 | logfile |
✘ | 7Y8A | 33683 | 2024-03-10 | 2022-06-23 | 2.71 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 53404 | 4518 | 49 | 0 | 502 | 0 | 0 | logfile |
✘ | 8HG6 | 34736 | 2024-03-11 | 2022-11-13 | 3.44 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7259 | 593 | 6 | 0 | 60 | 0 | 0 | logfile |
✘ | 7RBU | 24402 | 2024-03-10 | 2021-07-06 | 3.7 | 2.38 | — | 2.2 | 0.006 | 0.80 | 0.0 | 0.05 | 12.81 | 0.00 | 2.167 | 6.95 | 0.00 | 9.1 | 90.7 | 0.2 | -2.50 | 0.74 | 0.77 | 4.05 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4107 | 510 | 6 | 0 | 7 | 0 | 0 | logfile |
✘ | 8CAM | 16530 | 2024-03-18 | 2023-01-24 | 1.86 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 86648 | 2767 | 65 | 2724 | 322 | 6113 | 0 | logfile |
✘ | 8SA4 | 40264 | 2024-03-10 | 2023-03-31 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5193 | 0 | 3 | 236 | 1 | 0 | 0 | logfile |
✘ | 8i5B | 35193 | 2024-03-16 | 2023-01-24 | 2.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13440 | 1563 | 8 | 0 | 30 | 0 | 0 | logfile |