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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7AHQ | 11790 | 2022-12-18 | 2020-09-25 | 3.6 | 4.20 | 3.44 | 3.7 | 0.011 | 1.09 | 0.0 | 0.07 | 14.31 | 0.01 | 1.179 | 8.04 | 0.00 | 2.5 | 97.5 | 0.0 | -2.65 | 0.77 | 0.82 | 2.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15055 | 1855 | 10 | 0 | 20 | 0 | 0 | logfile |
✔ | 6ZoK | 11321 | 2022-12-22 | 2020-07-07 | 2.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 50192 | 2970 | 26 | 1232 | 110 | 0 | 0 | logfile |
✘ | 6LMK | 0917 | 2022-12-18 | 2019-12-26 | 3.7 | 3.89 | — | 3.8 | 0.009 | 0.96 | 0.0 | 0.06 | 15.10 | 0.01 | 2.283 | 7.19 | 0.62 | 6.5 | 93.5 | 0.0 | -4.19 | 0.68 | 0.82 | 1.70 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9240 | 1178 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 6SL5 | 10236 | 2022-12-22 | 2019-08-18 | 2.84 | 2.97 | 2.83 | 3.0 | 0.026 | 2.96 | 9.0 | 0.14 | 20.93 | 0.02 | 1.187 | 20.83 | 0.73 | 7.3 | 92.0 | 0.7 | -3.12 | 0.71 | 0.77 | 2.42 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 43789 | 3744 | 36 | 0 | 292 | 0 | 0 | logfile |
✘ | 7BNo | 12231 | 2022-12-18 | 2021-01-22 | 4.2 | 4.76 | 4.36 | 4.4 | 0.007 | 0.99 | 0.0 | 0.06 | 14.04 | 0.02 | 2.216 | 13.19 | 0.72 | 9.3 | 90.7 | 0.0 | -3.77 | 0.88 | 0.80 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25480 | 3197 | 7 | 0 | 33 | 0 | 0 | logfile |
✘ | 6UD3 | 20731 | 2022-12-18 | 2019-09-18 | 3.5 | 4.06 | 3.46 | 3.8 | 0.018 | 1.60 | 0.0 | 0.11 | 11.84 | 0.01 | 2.293 | 7.52 | 0.00 | 4.6 | 95.4 | 0.0 | -1.90 | 0.79 | 0.78 | 1.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14346 | 1765 | 10 | 0 | 6 | 0 | 0 | logfile |
✘ | 6PW6 | 20500 | 2022-12-18 | 2019-07-22 | 4.5 | 4.56 | 4.36 | 4.5 | 0.021 | 1.78 | 0.0 | 0.11 | 10.80 | 0.01 | 2.200 | 1.86 | 0.56 | 2.7 | 97.2 | 0.2 | 0.50 | 0.74 | 0.81 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15942 | 1842 | 45 | 0 | 108 | 0 | 0 | logfile |
✘ | 6LiD | 0904 | 2022-12-18 | 2019-12-10 | 2.7 | 2.74 | — | 2.7 | 0.007 | 0.99 | 0.0 | 0.06 | 14.33 | 0.01 | 1.890 | 3.70 | 1.96 | 4.8 | 95.1 | 0.1 | -4.84 | 0.62 | 0.74 | 3.13 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17964 | 2162 | 22 | 0 | 26 | 246 | 0 | logfile |
✔ | 6UQo | 20851 | 2022-12-22 | 2019-10-21 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 48522 | 6156 | 28 | 0 | 30 | 0 | 0 | logfile |
✘ | 6UTF | 20877 | 2022-12-21 | 2019-10-29 | 3.4 | 4.04 | 3.76 | 4.0 | 0.009 | 1.28 | 0.0 | 0.07 | 10.41 | 0.01 | 2.036 | 7.47 | 0.70 | 5.7 | 93.9 | 0.5 | -3.27 | 0.75 | 0.77 | 1.47 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 46494 | 6013 | 28 | 0 | 0 | 0 | 0 | logfile |
✘ | 6VXM | 21444 | 2022-12-18 | 2020-02-22 | 3.06 | 3.76 | — | 3.4 | 0.018 | 1.02 | 0.0 | 0.05 | 12.84 | 0.00 | 2.208 | 5.67 | 0.00 | 3.9 | 96.1 | 0.0 | -2.02 | 0.75 | 0.81 | 2.38 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15064 | 1939 | 14 | 0 | 21 | 0 | 0 | logfile |
✘ | 6VFi | 21173 | 2022-12-19 | 2020-01-05 | 4.54 | 4.63 | 4.54 | 4.5 | 0.018 | 1.47 | 0.0 | 0.09 | 10.93 | 0.01 | 2.449 | 0.53 | 0.00 | 1.3 | 98.7 | 0.0 | 1.21 | 0.74 | 0.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 60925 | 7875 | 50 | 0 | 0 | 0 | 0 | logfile |
✘ | 6ZP7 | 11337 | 2022-12-18 | 2020-07-08 | 3.3 | 4.01 | 3.43 | 3.7 | 0.012 | 0.83 | 0.0 | 0.16 | 13.52 | 0.01 | 0.008 | 16.14 | 0.52 | 3.0 | 97.0 | 0.0 | -0.92 | 0.64 | 0.59 | 1.49 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 23615 | 2861 | 33 | 0 | 92 | 0 | 0 | logfile |
✘ | 6VoY | 21301 | 2022-12-18 | 2020-02-01 | 3.7 | 4.09 | — | 4.0 | 0.013 | 1.52 | 30.0 | 0.10 | 24.39 | 0.01 | 1.583 | 35.15 | 0.46 | 2.4 | 97.6 | 0.0 | -6.32 | 0.69 | 0.82 | 2.12 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17556 | 1724 | 16 | 180 | 6 | 0 | 0 | logfile |
✘ | 6PM5 | 20388 | 2022-12-18 | 2019-07-01 | 3.1 | 3.38 | — | 3.4 | 0.001 | 0.42 | 0.0 | 0.06 | 6.80 | 0.00 | 2.275 | 5.10 | 0.00 | 2.4 | 97.6 | 0.0 | -4.42 | 0.52 | 0.78 | 3.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13975 | 1735 | 15 | 0 | 15 | 0 | 0 | logfile |
✘ | 6XZC | 10658 | 2022-12-18 | 2020-02-03 | 3.37 | 3.56 | 3.37 | 3.6 | 0.004 | 0.63 | 0.0 | 0.04 | 12.50 | 0.01 | 2.323 | 2.37 | 3.06 | 1.7 | 98.3 | 0.0 | -1.92 | 0.66 | 0.74 | 0.86 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13279 | 1694 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7C17 | 30268 | 2022-12-18 | 2020-05-02 | 4.22 | 4.29 | — | 4.2 | 0.003 | 0.73 | 0.0 | 0.05 | 16.32 | 0.01 | 1.995 | 7.56 | 0.21 | 5.7 | 94.3 | 0.0 | -4.63 | 0.79 | 0.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 33061 | 3995 | 12 | 104 | 4 | 0 | 0 | logfile |
✔ | 6W1Z | 21519 | 2022-12-22 | 2020-03-04 | 2.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 48536 | 6156 | 27 | 0 | 36 | 0 | 0 | logfile |
✘ | 7LUM | 23522 | 2022-12-19 | 2021-02-22 | 4.5 | 4.68 | — | 4.6 | 0.007 | 0.85 | 0.0 | 0.05 | 14.02 | 0.00 | 1.970 | 26.31 | 0.00 | 7.5 | 92.3 | 0.2 | -0.70 | 0.79 | 0.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 63978 | 8374 | 16 | 0 | 0 | 0 | 0 | logfile |
✘ | 6RPo | 4979 | 2022-12-19 | 2019-05-14 | 2.39 | 2.44 | — | 2.4 | 0.006 | 0.92 | 0.0 | 0.05 | 15.02 | 0.01 | 2.326 | 7.31 | 0.00 | 3.7 | 95.8 | 0.5 | -2.67 | 0.72 | 0.86 | 4.83 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 101400 | 12060 | 60 | 0 | 0 | 0 | 0 | logfile |