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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7E0i | 30933 | 2023-04-20 | 2021-01-28 | 3.53 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8033 | 677 | 6 | 0 | 58 | 0 | 0 | logfile |
✘ | 8AYH | 15713 | 2023-04-25 | 2022-09-02 | 3.35 | 3.45 | 3.40 | 3.4 | 0.007 | 0.91 | 0.0 | 0.06 | 14.44 | 0.01 | 2.114 | 5.00 | 0.65 | 6.5 | 93.4 | 0.1 | -4.12 | 0.83 | 0.85 | 2.90 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19109 | 2414 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 7WTH | 32786 | 2023-04-19 | 2022-02-04 | 4.3 | 3.63 | — | 4.0 | 0.004 | 0.78 | 0.0 | 0.05 | 12.97 | 0.01 | 2.169 | 9.08 | 0.85 | 8.0 | 92.0 | 0.0 | -2.03 | 0.69 | 0.70 | — | 3.8 | 0.004 | 0.77 | 0.0 | 0.05 | 13.51 | 0.00 | 2.154 | 11.58 | 0.00 | 10.6 | 89.2 | 0.2 | -2.44 | 1.20 | 0.69 | 0.72 | — | 3257 | 421 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 6PPL | 20442 | 2023-04-20 | 2019-07-08 | 3.02 | 3.14 | — | 3.1 | 0.010 | 0.99 | 0.0 | 0.25 | 14.17 | 0.01 | 1.917 | 3.20 | 0.23 | 2.7 | 97.3 | 0.0 | -6.00 | 0.74 | 0.86 | 4.10 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8155 | 980 | 6 | 0 | 4 | 0 | 0 | logfile |
✘ | 7EWL | 31351 | 2023-04-22 | 2021-05-25 | 3.52 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13784 | 994 | 2 | 0 | 0 | 0 | 6756 | logfile |
✘ | 6K0A | 30036 | 2023-04-26 | 2019-05-05 | 4.6 | 4.81 | — | 4.5 | 0.003 | 0.70 | 0.0 | 0.04 | 15.45 | 0.01 | 2.316 | 2.94 | 0.83 | 5.3 | 94.7 | 0.0 | -4.65 | 0.80 | 0.60 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22276 | 1364 | 14 | 516 | 2 | 0 | 0 | logfile |
✔ | 3JCL | 6526 | 2023-04-27 | 2015-12-21 | 4.0 | 4.03 | — | 4.0 | 0.018 | 1.83 | 9.0 | 0.09 | 9.75 | 0.01 | 2.379 | 2.74 | 0.00 | 5.2 | 94.3 | 0.6 | -0.72 | 0.71 | 0.74 | — | 4.0 | 0.003 | 0.74 | 0.0 | 0.04 | 14.59 | 0.00 | 2.114 | 12.67 | 0.44 | 7.2 | 92.7 | 0.1 | -0.57 | 1.77 | 0.70 | 0.70 | — | 24822 | 3201 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZD0 | 11172 | 2023-04-20 | 2020-06-13 | 4.6 | 4.62 | 2.80 | 3.7 | 0.004 | 0.91 | 0.0 | 0.05 | 7.55 | 0.00 | 2.207 | 10.05 | 0.00 | 10.1 | 89.8 | 0.1 | -4.73 | 0.59 | 0.58 | — | 4.5 | 0.003 | 0.78 | 0.0 | 0.04 | 5.38 | 0.00 | 2.341 | 5.89 | 0.00 | 15.0 | 84.6 | 0.4 | -4.68 | 2.32 | 0.61 | 0.58 | — | 7962 | 1611 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JW0 | 22512 | 2023-04-27 | 2020-08-24 | 4.3 | 4.63 | 4.41 | 4.4 | 0.010 | 1.54 | 6.0 | 0.10 | 8.01 | 0.01 | 2.527 | 0.37 | 0.00 | 2.3 | 97.5 | 0.1 | 1.05 | 0.81 | 0.71 | — | 4.4 | 0.003 | 0.64 | 0.0 | 0.05 | 9.97 | 0.00 | 2.180 | 5.50 | 0.00 | 3.4 | 96.6 | 0.0 | 0.41 | 1.28 | 0.85 | 0.79 | — | 26251 | 4314 | 27 | 0 | 69 | 0 | 0 | logfile |
✘ | 6RKo | 4908 | 2023-04-20 | 2019-04-30 | 2.68 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7289 | 875 | 8 | 0 | 9 | 31 | 0 | logfile |
✔ | 6KS7 | 0759 | 2023-04-22 | 2019-08-23 | 4.62 | 4.57 | — | 4.5 | 0.001 | 0.39 | 0.0 | 0.04 | 7.11 | 0.00 | 2.241 | 5.72 | 0.00 | 4.3 | 95.7 | 0.0 | -3.50 | 0.70 | 0.62 | — | 4.5 | 0.003 | 0.70 | 0.0 | 0.04 | 12.04 | 0.00 | 2.131 | 14.80 | 0.03 | 3.3 | 96.6 | 0.1 | -0.06 | 1.85 | 0.74 | 0.67 | — | 62022 | 8131 | 16 | 0 | 0 | 0 | 0 | logfile |
✘ | 6Z5S | 11081 | 2023-04-26 | 2020-05-27 | 2.65 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22794 | 2214 | 66 | 0 | 91 | 10 | 0 | logfile |
✔ | 6HZ5 | 0311 | 2023-04-24 | 2018-10-22 | 4.2 | 4.28 | 4.18 | 4.3 | 0.009 | 0.97 | 0.0 | 0.05 | 14.60 | 0.01 | 1.960 | 2.94 | 0.70 | 2.7 | 97.3 | 0.0 | -0.55 | 0.79 | 0.76 | — | 4.2 | 0.003 | 0.58 | 0.0 | 0.04 | 14.66 | 0.00 | 1.803 | 11.78 | 0.05 | 4.9 | 95.1 | 0.0 | 0.00 | 1.88 | 0.81 | 0.78 | — | 67582 | 4120 | 26 | 6 | 12 | 0 | 33368 | logfile |
✔ | 6ZFo | 11184 | 2023-04-24 | 2020-06-17 | 4.4 | 4.43 | — | 4.4 | 0.003 | 0.56 | 0.0 | 0.04 | 10.41 | 0.00 | 2.157 | 3.58 | 1.30 | 4.5 | 95.5 | 0.0 | -0.66 | 0.49 | 0.51 | — | 4.4 | 0.003 | 0.60 | 0.0 | 0.04 | 11.46 | 0.00 | 1.946 | 11.31 | 0.00 | 5.3 | 94.7 | 0.0 | -1.00 | 1.56 | 0.53 | 0.59 | — | 18988 | 1252 | 8 | 0 | 2 | 0 | 9310 | logfile |
✔ | 6PVL | 20492 | 2023-04-25 | 2019-07-21 | 4.4 | 4.48 | — | 4.4 | 0.008 | 1.13 | 0.0 | 0.06 | 11.67 | 0.01 | 2.202 | 6.80 | 1.39 | 15.4 | 84.2 | 0.5 | -5.53 | 0.69 | 0.81 | — | 4.4 | 0.004 | 0.85 | 0.0 | 0.04 | 13.22 | 0.00 | 2.071 | 16.18 | 0.00 | 12.8 | 87.0 | 0.2 | -1.56 | 1.50 | 0.70 | 0.82 | — | 21006 | 2576 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 7KY9 | 23072 | 2023-04-21 | 2020-12-07 | 4.05 | 4.67 | — | 4.5 | 0.004 | 1.14 | 0.0 | 0.05 | 13.33 | 0.00 | 2.206 | 15.79 | 0.00 | 8.3 | 91.7 | 0.0 | -1.25 | 0.67 | 0.71 | — | 4.5 | 0.004 | 0.71 | 0.0 | 0.04 | 13.56 | 0.00 | 2.097 | 20.12 | 0.00 | 9.3 | 90.7 | 0.0 | -1.08 | 0.49 | 0.68 | 0.74 | — | 10354 | 1275 | 7 | 0 | 14 | 0 | 0 | logfile |
✔ | 7TZ0 | 26201 | 2023-04-19 | 2022-02-15 | 4.17 | 3.79 | — | 4.4 | 0.003 | 0.62 | 0.0 | 0.04 | 12.38 | 0.01 | 2.265 | 10.65 | 0.00 | 7.9 | 92.1 | 0.0 | -1.73 | 0.41 | 0.61 | — | 4.0 | 0.004 | 0.77 | 0.0 | 0.05 | 12.39 | 0.00 | 2.106 | 22.26 | 0.35 | 12.2 | 87.8 | 0.0 | -2.19 | 1.41 | 0.44 | 0.64 | — | 2674 | 347 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KPW | 22990 | 2023-04-20 | 2020-11-12 | 4.9 | 5.04 | 4.74 | 4.9 | 0.009 | 1.54 | 4.0 | 0.10 | 1.89 | 0.01 | 2.279 | 3.61 | 0.00 | 3.9 | 94.9 | 1.2 | 4.09 | 0.75 | 0.67 | — | 4.9 | 0.003 | 0.73 | 0.0 | 0.04 | 5.85 | 0.00 | 2.148 | 2.79 | 0.00 | 11.5 | 87.9 | 0.6 | -0.50 | 2.04 | 0.82 | 0.82 | — | 4313 | 865 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Z9R | 14576 | 2023-04-28 | 2022-03-21 | 4.2 | 3.82 | 4.08 | 4.0 | 0.008 | 1.40 | 15.0 | 0.10 | 12.86 | 0.02 | 1.182 | 6.11 | 1.21 | 3.3 | 96.6 | 0.0 | -1.16 | 0.71 | 0.73 | — | 3.8 | 0.003 | 0.63 | 0.0 | 0.04 | 12.89 | 0.00 | 2.141 | 7.91 | 0.03 | 2.9 | 97.1 | 0.0 | 0.19 | 0.85 | 0.76 | 0.79 | — | 27078 | 3349 | 29 | 0 | 66 | 0 | 0 | logfile |
✔ | 6V05 | 20969 | 2023-04-22 | 2019-11-18 | 4.1 | 4.20 | — | 4.1 | 0.003 | 0.66 | 0.0 | 0.05 | 13.87 | 0.00 | 2.054 | 9.26 | 0.75 | 3.6 | 96.3 | 0.1 | -2.86 | 0.70 | 0.79 | — | 4.1 | 0.003 | 0.67 | 0.0 | 0.04 | 13.33 | 0.00 | 2.158 | 9.57 | 0.00 | 5.1 | 94.9 | 0.0 | -0.46 | 1.08 | 0.70 | 0.77 | — | 13705 | 1884 | 6 | 0 | 0 | 0 | 0 | logfile |