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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7ULW | 26595 | 2023-02-22 | 2022-04-05 | 3.1 | 3.61 | 3.28 | 3.5 | 0.002 | 0.41 | 0.0 | 0.04 | 13.47 | 0.00 | 2.235 | 2.87 | 0.00 | 1.3 | 98.7 | 0.0 | 2.53 | 0.53 | 0.83 | 2.45 | 3.4 | 0.003 | 0.58 | 0.0 | 0.04 | 16.61 | 0.00 | 2.103 | 7.93 | 0.30 | 2.4 | 97.6 | 0.0 | 1.71 | 0.77 | 0.54 | 0.85 | 2.68 | 18766 | 2400 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WKD | 32565 | 2023-02-22 | 2022-01-09 | 3.01 | 2.29 | — | 3.1 | 0.007 | 0.41 | 1.0 | 0.04 | 7.82 | 0.00 | 1.978 | 6.84 | 0.31 | 1.4 | 98.6 | 0.0 | -1.70 | 0.68 | 0.66 | 1.77 | 3.0 | 0.017 | 0.79 | 0.0 | 0.04 | 14.70 | 0.01 | 1.891 | 15.45 | 0.42 | 3.8 | 96.2 | 0.0 | 0.29 | 1.05 | 0.72 | 0.75 | 2.56 | 17515 | 1120 | 6 | 0 | 0 | 0 | 8712 | logfile |
✔ | 7EU8 | 31309 | 2023-02-22 | 2021-05-16 | 4.07 | 4.11 | — | 3.6 | 0.002 | 0.41 | 0.0 | 0.10 | 8.07 | 0.00 | 2.206 | 3.13 | 3.51 | 2.0 | 97.9 | 0.1 | 1.10 | 0.75 | 0.61 | — | 3.4 | 0.002 | 0.63 | 0.0 | 0.06 | 8.82 | 0.00 | 2.132 | 7.20 | 0.00 | 4.1 | 95.7 | 0.2 | -0.13 | 1.40 | 0.79 | 0.69 | — | 18670 | 3010 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 7TD2 | 25821 | 2023-02-20 | 2021-12-30 | 3.11 | 3.30 | — | 3.2 | 0.002 | 0.41 | 0.0 | 0.04 | 11.84 | 0.00 | 2.175 | 2.14 | 0.42 | 1.1 | 98.9 | 0.0 | -0.58 | 0.53 | 0.76 | 2.85 | 3.2 | 0.004 | 0.51 | 0.0 | 0.04 | 14.67 | 0.00 | 1.952 | 5.24 | 0.14 | 3.5 | 96.5 | 0.0 | 1.43 | 1.23 | 0.54 | 0.79 | 3.17 | 13528 | 904 | 5 | 0 | 1 | 0 | 6632 | logfile |
✔ | 6U5S | 20654 | 2023-02-28 | 2019-08-28 | 3.07 | 3.44 | — | 3.4 | 0.003 | 0.41 | 0.0 | 0.07 | 12.04 | 0.00 | 2.078 | 6.02 | 0.00 | 3.3 | 96.7 | 0.0 | -3.21 | 0.81 | 0.80 | 4.41 | 3.3 | 0.003 | 0.46 | 0.0 | 0.04 | 13.52 | 0.00 | 2.145 | 6.98 | 0.00 | 2.9 | 97.1 | 0.0 | 0.08 | 1.22 | 0.83 | 0.83 | 4.31 | 21461 | 1504 | 12 | 0 | 20 | 0 | 9755 | logfile |
✔ | 7PE8 | 13348 | 2023-02-27 | 2021-08-09 | 3.2 | 3.51 | — | 3.4 | 0.002 | 0.41 | 0.0 | 0.04 | 8.71 | 0.00 | 2.255 | 4.47 | 1.65 | 3.2 | 96.8 | 0.0 | -0.20 | 0.79 | 0.81 | 2.75 | 3.4 | 0.002 | 0.52 | 0.0 | 0.04 | 12.64 | 0.00 | 2.179 | 7.09 | 0.40 | 4.0 | 96.0 | 0.0 | 0.66 | 0.49 | 0.80 | 0.83 | 1.94 | 29291 | 3832 | 8 | 0 | 3 | 0 | 0 | logfile |
✔ | 7FiJ | 31599 | 2023-02-17 | 2021-07-31 | 3.8 | 2.32 | — | 1.8 | 0.001 | 0.41 | 0.0 | 0.04 | 8.02 | 0.00 | 2.344 | 3.95 | 0.00 | 4.1 | 95.9 | 0.0 | 1.10 | 0.58 | 0.50 | 3.05 | 1.6 | 0.003 | 0.71 | 0.0 | 0.04 | 10.87 | 0.00 | 2.234 | 8.95 | 1.25 | 10.6 | 89.4 | 0.0 | -0.78 | 0.63 | 0.60 | 0.54 | 2.95 | 3061 | 561 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6W18 | 21503 | 2023-02-20 | 2020-03-03 | 4.2 | 4.20 | 4.18 | 4.2 | 0.002 | 0.41 | 0.0 | 0.04 | 11.01 | 0.00 | 2.196 | 4.75 | 0.00 | 3.0 | 97.0 | 0.0 | -3.43 | 0.71 | 0.62 | — | 4.2 | 0.003 | 0.71 | 0.0 | 0.04 | 12.93 | 0.00 | 2.101 | 9.33 | 0.18 | 7.3 | 92.7 | 0.0 | -1.63 | 1.34 | 0.77 | 0.71 | — | 13151 | 1837 | 9 | 0 | 3 | 0 | 0 | logfile |
✔ | 6WCB | 21605 | 2023-02-20 | 2020-03-30 | 3.17 | 3.17 | — | 3.2 | 0.005 | 0.41 | 0.0 | 0.03 | 13.87 | 0.00 | 2.128 | 2.50 | 1.29 | 0.8 | 99.2 | 0.0 | 0.58 | 0.55 | 0.77 | 2.89 | 3.2 | 0.003 | 0.50 | 0.0 | 0.04 | 15.55 | 0.00 | 2.072 | 3.71 | 0.16 | 1.7 | 98.3 | 0.0 | 3.40 | 1.29 | 0.54 | 0.79 | 2.46 | 11647 | 734 | 6 | 0 | 7 | 40 | 5904 | logfile |
✔ | 7Xo3 | 33335 | 2023-02-16 | 2022-04-30 | 2.6 | 2.32 | 1.68 | 2.7 | 0.002 | 0.41 | 0.0 | 0.05 | 12.37 | 0.00 | 2.223 | 4.70 | 0.00 | 8.2 | 91.8 | 0.0 | -3.31 | 0.45 | 0.81 | 5.78 | 2.7 | 0.003 | 0.56 | 0.0 | 0.05 | 16.32 | 0.00 | 2.293 | 2.44 | 3.03 | 9.8 | 90.2 | 0.0 | -1.76 | 2.17 | 0.48 | 0.85 | 5.80 | 2598 | 378 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VXB | 32174 | 2023-02-27 | 2021-11-12 | 3.9 | 4.21 | — | 4.1 | 0.002 | 0.41 | 0.0 | 0.04 | 7.20 | 0.00 | 2.045 | 12.30 | 0.00 | 4.1 | 95.8 | 0.0 | -1.93 | 0.60 | 0.62 | 0.94 | 4.1 | 0.007 | 0.88 | 0.0 | 0.05 | 14.42 | 0.01 | 1.887 | 22.10 | 0.75 | 4.9 | 95.0 | 0.1 | -0.50 | 1.20 | 0.67 | 0.76 | 0.98 | 29888 | 3795 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UVT | 26816 | 2023-02-20 | 2022-05-02 | 3.9 | 4.17 | 4.00 | 4.1 | 0.001 | 0.41 | 0.0 | 0.02 | 16.13 | 0.00 | 1.897 | 6.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.76 | 0.74 | — | 4.1 | 0.006 | 0.70 | 0.0 | 0.04 | 17.94 | 0.01 | 1.892 | 21.35 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.48 | 0.77 | 0.76 | — | 12409 | 0 | 1 | 386 | 0 | 0 | 4149 | logfile |
✔ | 7QN8 | 14070 | 2023-02-22 | 2021-12-20 | 3.1 | 3.39 | — | 3.2 | 0.002 | 0.42 | 0.0 | 0.04 | 8.28 | 0.00 | 2.247 | 3.93 | 0.34 | 0.5 | 99.5 | 0.0 | 2.21 | 0.79 | 0.86 | 3.96 | 3.1 | 0.002 | 0.60 | 0.0 | 0.04 | 13.00 | 0.00 | 2.181 | 8.10 | 0.34 | 1.2 | 98.8 | 0.0 | 1.88 | 0.80 | 0.80 | 0.90 | 3.94 | 16755 | 1992 | 19 | 0 | 32 | 0 | 0 | logfile |
✔ | 7T4N | 25681 | 2023-02-17 | 2021-12-10 | 2.35 | 2.66 | 2.38 | 2.5 | 0.002 | 0.42 | 0.0 | 0.04 | 16.22 | 0.00 | 2.207 | 4.39 | 1.25 | 1.0 | 99.0 | 0.0 | 0.87 | 0.63 | 0.85 | 3.82 | 2.5 | 0.003 | 0.49 | 0.0 | 0.04 | 16.48 | 0.00 | 2.284 | 5.93 | 1.53 | 1.0 | 99.0 | 0.0 | 1.61 | 0.24 | 0.66 | 0.87 | 3.71 | 6476 | 803 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JLX | 22383 | 2023-02-17 | 2020-07-30 | 4.6 | 3.86 | — | 3.7 | 0.001 | 0.42 | 0.0 | 0.04 | 3.80 | 0.00 | 2.240 | 2.96 | 0.00 | 6.7 | 93.3 | 0.0 | 1.23 | 0.54 | 0.51 | — | 3.8 | 0.003 | 0.75 | 0.0 | 0.04 | 7.17 | 0.00 | 2.306 | 8.03 | 0.00 | 17.7 | 82.3 | 0.0 | -2.25 | 2.42 | 0.48 | 0.53 | — | 3288 | 664 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7U1E | 26299 | 2023-02-22 | 2022-02-21 | 4.52 | 4.53 | — | 4.5 | 0.001 | 0.42 | 0.0 | 0.04 | 11.18 | 0.00 | 2.240 | 5.30 | 2.68 | 3.6 | 96.4 | 0.0 | -1.42 | 0.60 | 0.73 | — | 4.4 | 0.004 | 0.71 | 0.0 | 0.05 | 11.83 | 0.00 | 2.127 | 14.33 | 0.07 | 5.5 | 94.5 | 0.0 | 0.08 | 0.59 | 0.61 | 0.76 | — | 18366 | 2741 | 9 | 0 | 6 | 0 | 0 | logfile |
✔ | 7WoA | 32646 | 2023-02-28 | 2022-01-21 | 3.25 | 2.98 | — | 3.2 | 0.002 | 0.42 | 0.0 | 0.04 | 8.91 | 0.00 | 2.229 | 6.55 | 4.23 | 3.8 | 96.2 | 0.0 | -3.46 | 0.86 | 0.78 | 2.52 | 3.2 | 0.004 | 0.66 | 0.0 | 0.05 | 13.68 | 0.00 | 2.139 | 10.17 | 0.40 | 7.5 | 92.5 | 0.0 | -1.83 | 0.85 | 0.89 | 0.85 | 2.85 | 31952 | 4060 | 10 | 0 | 39 | 0 | 0 | logfile |
✔ | 7EoR | 31228 | 2023-02-24 | 2021-04-22 | 4.0 | 4.40 | — | 4.1 | 0.002 | 0.42 | 0.0 | 0.04 | 9.09 | 0.00 | 2.227 | 7.42 | 1.64 | 3.2 | 96.8 | 0.0 | 0.66 | 0.86 | 0.76 | — | 4.1 | 0.004 | 0.76 | 0.0 | 0.05 | 13.42 | 0.00 | 2.112 | 16.82 | 0.19 | 6.3 | 93.7 | 0.0 | -0.91 | 2.23 | 0.88 | 0.82 | — | 24204 | 3030 | 8 | 0 | 16 | 0 | 0 | logfile |
✔ | 7EBF | 31053 | 2023-02-20 | 2021-03-09 | 2.63 | 2.31 | — | 2.5 | 0.002 | 0.42 | 0.0 | 0.04 | 11.01 | 0.00 | 2.294 | 5.76 | 2.11 | 2.0 | 98.0 | 0.0 | 1.61 | 0.65 | 0.78 | 2.64 | 2.3 | 0.003 | 0.52 | 0.0 | 0.04 | 15.90 | 0.00 | 2.270 | 8.68 | 2.56 | 2.9 | 97.1 | 0.0 | 1.11 | 0.55 | 0.67 | 0.81 | 2.90 | 13052 | 1640 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QNA | 14072 | 2023-02-21 | 2021-12-20 | 3.0 | 3.58 | — | 3.3 | 0.002 | 0.42 | 0.0 | 0.04 | 9.01 | 0.00 | 2.271 | 4.69 | 0.76 | 1.2 | 98.8 | 0.0 | 1.88 | 0.76 | 0.86 | 3.66 | 3.3 | 0.003 | 0.67 | 0.0 | 0.04 | 13.54 | 0.00 | 2.185 | 9.10 | 1.45 | 2.1 | 97.9 | 0.0 | 1.22 | 2.13 | 0.77 | 0.89 | 4.09 | 14777 | 1763 | 16 | 0 | 29 | 0 | 0 | logfile |