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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7BL5 | 12218 | 2023-08-24 | 2021-01-18 | 3.3 | 3.74 | — | 3.5 | 0.002 | 0.45 | 0.0 | 0.03 | 14.15 | 0.00 | 2.029 | 11.79 | 0.11 | 5.7 | 94.3 | 0.0 | -1.05 | 0.75 | 0.79 | 1.02 | 3.5 | 0.005 | 0.69 | 1.0 | 0.04 | 16.08 | 0.00 | 1.883 | 20.41 | 1.05 | 9.3 | 90.7 | 0.0 | -1.99 | 0.64 | 0.76 | 0.84 | 1.01 | 98927 | 4348 | 46 | 3033 | 3 | 27 | 0 | logfile |
✘ | 8DK2 | 27481 | 2023-08-17 | 2022-07-01 | 4.1 | 4.81 | 4.17 | 4.1 | 0.002 | 0.47 | 0.0 | 0.04 | 13.54 | 0.00 | 1.988 | 7.72 | 2.88 | 3.7 | 96.3 | 0.0 | 2.05 | 0.84 | 0.80 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 23727 | 2840 | 12 | 52 | 4 | 0 | 0 | logfile |
✔ | 7X9C | 33071 | 2023-08-10 | 2022-03-15 | 3.0 | 3.24 | — | 3.2 | 0.002 | 0.52 | 0.0 | 0.04 | 10.16 | 0.00 | 2.208 | 8.69 | 0.00 | 3.2 | 96.8 | 0.0 | -2.49 | 0.58 | 0.71 | 1.58 | 3.2 | 0.004 | 0.72 | 0.0 | 0.04 | 14.54 | 0.00 | 2.141 | 12.76 | 2.39 | 3.1 | 96.9 | 0.0 | -0.27 | 0.64 | 0.60 | 0.78 | 1.79 | 7219 | 945 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WVV | 32859 | 2023-08-10 | 2022-02-11 | 2.9 | 3.01 | — | 3.1 | 0.002 | 0.45 | 0.0 | 0.04 | 12.21 | 0.00 | 2.286 | 7.42 | 0.00 | 2.2 | 97.8 | 0.0 | 0.74 | 0.59 | 0.74 | 2.55 | 3.0 | 0.003 | 0.55 | 0.0 | 0.04 | 15.35 | 0.00 | 2.136 | 9.20 | 1.89 | 2.9 | 97.1 | 0.0 | 0.43 | 0.45 | 0.62 | 0.79 | 2.80 | 7020 | 911 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8D5C | 27208 | 2023-08-19 | 2022-06-04 | 3.9 | 4.25 | 3.98 | 4.2 | 0.002 | 0.48 | 0.0 | 0.04 | 13.15 | 0.00 | 1.991 | 32.36 | 0.00 | 7.0 | 93.0 | 0.0 | -1.61 | 0.65 | 0.64 | 1.09 | 4.2 | 0.003 | 0.55 | 0.0 | 0.04 | 14.87 | 0.00 | 1.991 | 38.84 | 0.04 | 10.7 | 89.3 | 0.0 | -1.68 | 1.24 | 0.67 | 0.67 | 1.04 | 26109 | 2730 | 15 | 0 | 0 | 0 | 4739 | logfile |
✔ | 8CSV | 26972 | 2023-08-09 | 2022-05-13 | 2.7 | 2.53 | 2.72 | 2.6 | 0.002 | 0.47 | 0.0 | 0.04 | 11.85 | 0.00 | 2.246 | 2.73 | 1.03 | 2.7 | 97.1 | 0.2 | 0.82 | 0.53 | 0.85 | 5.33 | 2.6 | 0.003 | 0.53 | 0.0 | 0.04 | 15.82 | 0.00 | 2.175 | 5.19 | 1.03 | 2.9 | 96.9 | 0.2 | 2.04 | 0.72 | 0.57 | 0.88 | 4.86 | 3712 | 483 | 3 | 0 | 0 | 48 | 0 | logfile |
✔ | 6XAS | 22114 | 2023-08-26 | 2020-06-04 | 3.8 | 3.01 | 3.14 | 2.9 | 0.002 | 0.49 | 0.0 | 0.04 | 10.96 | 0.00 | 1.961 | 4.92 | 1.49 | 2.2 | 97.8 | 0.0 | -2.00 | 0.62 | 0.55 | 1.72 | 3.0 | 0.004 | 0.64 | 0.0 | 0.04 | 14.52 | 0.00 | 1.788 | 8.34 | 0.31 | 4.2 | 95.8 | 0.0 | 0.03 | 0.74 | 0.61 | 0.53 | 1.54 | 46887 | 5804 | 16 | 73 | 3 | 0 | 0 | logfile |
✔ | 7N5B | 24185 | 2023-08-11 | 2021-06-05 | 3.8 | 4.41 | 3.97 | 4.3 | 0.002 | 0.48 | 0.0 | 0.04 | 14.24 | 0.00 | 1.903 | 6.38 | 0.20 | 2.3 | 97.7 | 0.0 | 2.06 | 0.70 | 0.77 | 1.53 | 4.3 | 0.003 | 0.57 | 0.0 | 0.04 | 16.25 | 0.00 | 1.978 | 7.86 | 0.10 | 3.0 | 97.0 | 0.0 | 2.68 | 0.45 | 0.66 | 0.78 | 1.67 | 9122 | 1160 | 4 | 0 | 6 | 0 | 0 | logfile |
✘ | 7ZMD | 14795 | 2023-08-19 | 2022-04-19 | 2.93 | 3.18 | 2.97 | 3.2 | 0.002 | 0.52 | 0.0 | 0.08 | 13.13 | 0.01 | 2.146 | 3.80 | 0.00 | 2.5 | 97.5 | 0.0 | 0.93 | 0.68 | 0.78 | 3.52 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18400 | 1191 | 2 | 0 | 0 | 0 | 9106 | logfile |
✔ | 7TYM | 26185 | 2023-08-12 | 2022-02-13 | 3.4 | 3.43 | — | 3.5 | 0.002 | 0.54 | 0.0 | 0.04 | 15.94 | 0.00 | 2.175 | 8.12 | 0.00 | 7.1 | 92.8 | 0.1 | -1.35 | 0.73 | 0.81 | 2.62 | 3.4 | 0.003 | 0.57 | 0.0 | 0.04 | 16.28 | 0.00 | 2.159 | 8.66 | 0.15 | 8.0 | 92.0 | 0.0 | -1.76 | 1.12 | 0.73 | 0.82 | 3.21 | 12112 | 1542 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EPD | 31238 | 2023-08-15 | 2021-04-26 | 3.9 | 2.74 | — | 3.5 | 0.002 | 0.45 | 0.0 | 0.04 | 12.27 | 0.00 | 2.232 | 7.06 | 0.00 | 4.0 | 96.0 | 0.0 | -2.46 | 0.69 | 0.63 | 0.57 | 3.5 | 0.004 | 0.64 | 0.0 | 0.04 | 14.15 | 0.00 | 2.224 | 13.87 | 0.45 | 5.3 | 94.7 | 0.0 | 0.04 | 1.20 | 0.75 | 0.74 | 1.44 | 10710 | 1569 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6W77 | 21569 | 2023-08-26 | 2020-03-18 | 3.6 | 3.44 | — | 3.3 | 0.002 | 0.53 | 0.0 | 0.03 | 14.96 | 0.00 | 2.084 | 9.33 | 0.12 | 6.1 | 93.7 | 0.2 | -3.22 | 0.73 | 0.67 | 0.91 | 3.3 | 0.007 | 0.92 | 0.0 | 0.05 | 16.99 | 0.01 | 1.829 | 19.25 | 0.50 | 12.0 | 87.8 | 0.2 | -2.57 | 2.05 | 0.77 | 0.72 | 0.90 | 47940 | 1949 | 18 | 1519 | 0 | 0 | 0 | logfile |
✔ | 7YGD | 33816 | 2023-08-10 | 2022-07-11 | 3.41 | 4.13 | 3.42 | 3.3 | 0.002 | 0.49 | 0.0 | 0.03 | 15.33 | 0.00 | 2.100 | 14.25 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.81 | — | 3.3 | 0.007 | 0.75 | 0.0 | 0.04 | 17.38 | 0.01 | 1.823 | 32.82 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.50 | 0.91 | 0.89 | — | 8313 | 0 | 3 | 389 | 6 | 0 | 0 | logfile |
✔ | 7YEG | 33772 | 2023-08-10 | 2022-07-05 | 3.73 | 3.29 | 3.71 | 3.5 | 0.002 | 0.48 | 0.0 | 0.04 | 13.17 | 0.00 | 2.191 | 5.16 | 0.37 | 3.1 | 96.8 | 0.0 | -4.62 | 0.61 | 0.57 | 0.60 | 3.5 | 0.003 | 0.69 | 0.0 | 0.04 | 15.76 | 0.00 | 2.056 | 11.23 | 0.26 | 5.0 | 95.0 | 0.0 | -1.54 | 3.07 | 0.58 | 0.55 | 1.13 | 49974 | 6306 | 24 | 0 | 51 | 0 | 0 | logfile |
✔ | 7V0X | 26952 | 2023-08-09 | 2022-05-11 | 3.0 | 2.83 | 2.92 | 2.9 | 0.002 | 0.63 | 0.0 | 0.04 | 19.06 | 0.01 | 2.211 | 6.52 | 5.05 | 4.0 | 96.0 | 0.0 | 0.72 | 0.61 | 0.88 | 3.78 | 2.9 | 0.002 | 0.53 | 0.0 | 0.04 | 19.08 | 0.00 | 2.176 | 7.23 | 4.38 | 4.9 | 95.1 | 0.0 | 1.77 | 0.47 | 0.60 | 0.88 | 3.17 | 2818 | 375 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6GC8 | 4383 | 2023-08-21 | 2018-04-17 | 3.8 | 4.18 | — | 3.9 | 0.002 | 0.57 | 0.0 | 0.03 | 12.93 | 0.00 | 2.129 | 3.87 | 0.16 | 6.3 | 93.5 | 0.2 | -4.04 | 0.71 | 0.60 | 0.92 | 3.9 | 0.005 | 0.77 | 0.0 | 0.04 | 16.33 | 0.01 | 1.836 | 30.15 | 1.36 | 12.1 | 87.7 | 0.2 | -2.45 | 2.92 | 0.83 | 0.79 | 0.75 | 88884 | 3090 | 42 | 3016 | 6 | 42 | 0 | logfile |
✔ | 8DQL | 27656 | 2023-08-09 | 2022-07-19 | 3.0 | 2.95 | 2.90 | 2.9 | 0.002 | 0.47 | 0.0 | 0.04 | 14.89 | 0.00 | 2.309 | 5.10 | 0.00 | 3.6 | 96.4 | 0.0 | 2.01 | 0.74 | 0.81 | 1.75 | 2.9 | 0.003 | 0.60 | 0.0 | 0.04 | 16.66 | 0.00 | 2.244 | 6.10 | 2.06 | 4.4 | 95.6 | 0.0 | 1.72 | 3.33 | 0.76 | 0.84 | 1.87 | 6402 | 771 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Li3 | 0902 | 2023-08-10 | 2019-12-10 | 3.32 | 3.48 | — | 3.8 | 0.002 | 0.56 | 0.0 | 0.04 | 13.86 | 0.00 | 2.124 | 7.66 | 0.00 | 2.4 | 97.6 | 0.0 | -2.69 | 0.55 | 0.68 | 0.78 | 3.6 | 0.003 | 0.65 | 0.0 | 0.04 | 16.65 | 0.00 | 2.150 | 9.72 | 0.33 | 3.8 | 96.2 | 0.0 | -0.12 | 1.35 | 0.59 | 0.77 | 1.61 | 8289 | 1045 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TYo | 26190 | 2023-08-11 | 2022-02-14 | 2.7 | 2.09 | 2.60 | 2.4 | 0.002 | 0.47 | 0.0 | 0.04 | 12.83 | 0.00 | 2.176 | 5.50 | 1.37 | 2.0 | 98.0 | 0.0 | -3.13 | 0.54 | 0.74 | 3.81 | 2.7 | 0.004 | 0.66 | 0.0 | 0.04 | 16.35 | 0.00 | 2.094 | 8.42 | 2.11 | 2.6 | 97.4 | 0.0 | 0.54 | 1.06 | 0.55 | 0.76 | 3.39 | 9052 | 1141 | 6 | 0 | 4 | 0 | 0 | logfile |
✔ | 8E4o | 27894 | 2023-08-09 | 2022-08-18 | 3.43 | 3.87 | 3.39 | 3.6 | 0.002 | 0.44 | 0.0 | 0.03 | 11.67 | 0.01 | 2.257 | 5.45 | 0.45 | 1.8 | 98.2 | 0.0 | 2.99 | 0.68 | 0.73 | 2.38 | 3.7 | 0.003 | 0.66 | 0.0 | 0.03 | 13.35 | 0.00 | 2.024 | 6.81 | 0.19 | 3.0 | 97.0 | 0.0 | 2.90 | 0.72 | 0.72 | 0.80 | 1.84 | 53496 | 3588 | 8 | 0 | 4 | 0 | 26024 | logfile |